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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0538200 |
| Transcript ID | LotjaGi3g1v0538200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase 4 regulatory subunit 2; TAIR: AT5G17070.1 serine/threonine-protein phosphatase 4 regulatory subunit-like protein; Swiss-Prot: sp|Q9W2U4|PP4R2_DROME Serine/threonine-protein phosphatase 4 regulatory subunit 2; TrEMBL-Plants: tr|I3SUI6|I3SUI6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0538200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:95470099..95475353) extracted from Lotus japonicus Gifu genome v1.2.
AACATCTAAAGCTGAGGCATAACCATAAGAAGCCCAATAAAGCTACACACAAATATAATTTTACTATTTATTATAAATAT ATACTACTGTAGTTAAGGTAAGTTCATTTTCACCTTTGCCTTAGATTAATTTAATTTTCCCCAATGTGCAATCCTTCATT TTCTACTGTAGTTATCATGGAGCAACCACACCATGATTCGCCTCCTCCCGCCGCCGCCGCGATGCCAGTTTCCGAAAATG ATGCGGTGGCTGTGGCTGTGGCTGATGATGCTGATGCTGATGCTTCCAACCACAAGTGAGTTTCGAATTCACTCCTGTTT CTCTTTGCAAAACCCTGCTCTTCCTGAATCAATTTCGCTTTCTTTGTTTGCAGAGACGTTGAACAGAAATTCGATGTTCC GAGGGAACAAGTTACACAGATTCTGCAAGCTATTGCATCCACTGGGAAATTCTGGTACGTGCTTTTCTTCTTCTTCTTCT TCTTCTTCTTCTTCTTCTTCGTGTTTGTGTTGTTTGTGTATTTCATTAGATCTAACGATGGACGCCACAGAATGAACCCT AGTCTGCATTCATGTTCAATTTACAAAACCCTAAGTTGCTTGCTGCTAAGAGTCCCATAGACTGAATCAAATCTAGGTAT TCTTCTAACCTTAGGTGTGTCTACTGCCTTTGACTACATTATGCTTTTACAATTATAAACATTGTAGGCTTTTACTGTGA GAATCAATTACTATATGATGCAAGGGGTTATATACTATCATGGGTCCTTTTATAAGATAAAAGTTTCTGTTTAGTCCTTT AAGTTGCAATTTAAGCGATACTACCCATTCGGAACCAATGCAATTAAGTTTCATTATTAGTGAACTGCCTACTGAAAAAT GATGTGCTAACACTTTGAAATCATGATGTGGTATTGTAAATTTGTACCCAGAAAATTTAAAGTATTTAATAGCGCAGAGT TGTTGTAGCGTAATAGTGCGAATGTAGCTTCACTTCCTGAGGCTGCTGGAGGGGGCCAGGATTGTTGCTATCACCATGGA AAATCATGGCTGGAATTGCAGCTGACCTTGATGCTTCACCAAATAGGTGTGAAAACCGGAAACCCCTTTTTTGCTCACTA ATTATAGGTTTTCCCACTCATTTTTTCAGGGAGATTTTAGGAACTGCTTATCCTTTTTGAAACAGGGGTTTTTAAGGTTT AGAAACCCCTATTCCTTAGAAACAAACTCTGCTTCCCCACCTGTGTTTTTAATTCCTAGCTGGTACGTGATGCGTAGATG TGTTTTTATAGCTAAACCTGGATCTTTTCCAGCAGCTCCCCTCTTTCAATATTGGCTTTTCTGTTTTCTGTTTCTCACGT GCTTACTCTCTGAGTGCTCGTGCTTAATCCTGGCACCCCAGTGATTTTGTGGACAATTTCTTGTGTTGTCCATCACTCTG CTATTCCTTCCTTGTGGTTTTGATTTGTTTGTCCTATCACACCTTTGCCTCCATGATCTTACCCATTTGACATCCTCTTA GCTTCTCAGGATTTATTCCTCAAGAATCTCCTTGAGCCTTAGCCTATGAAATATCTTGCCTTAGACTGTTGTTGATCGTT ACTGTTACCTATGATCATGGTGTTTGGGTAATAGTAATACAAATGAATATGTCCCTAAGTTGTCAATCTTGGCAGGATCC TGGGTTCCCATCCCATCCCAACCATGCCTTGGGATGAATTTTCCCATCCCATCCCAGTTCACTGTCCCGGCTACTGGCTA TCTCGGCGGGATGGTGAAGGCCCCAGTTTTTCAAAAATTCCTCCCAAATGTAAACGTTGGGGGTTTTATTTAGGGGCATT TCCAGGTTTCCGCAATGGAAAAAATCCTAGCACTTTGATTTTGTTCGATCTTTATCTCTCTTCTACCCACTTGGACCCTC TTCTCCTATGTTTTTCTTCGCTCCTTCCCTCTCTTCGGCCCAAAATTAGCCAACGACCACCACGACATGACCTCTGACCT TTCTCCGGCGAGCTTCACCTCTGTTCTACCCACTTCTAACCTCTTATCCTCTATTCTATTCTGTATTTATCATTGTTTTA GTATTTATATATAGGGCATGAATTATACAAAATTTAGGCAAAAATACTATCCCAGCCGTCCTGCTATCCAGTTTTGAGGC TGGCCGCAACAAACTGGGAACTGGGATTGACAACGCAGATATGTCCTAAATTTTCCCTTTTTTTTAGATTTGAGCATTCA TACACATGTATTATACACTATCTTGAATTTGGTTTTCTGTCAGTGACATCTGTATAGCGGCCACACCATGATCCACTCAC TATACCACTATAGCACCTTTTTTTTGATTGGGCAGTCCATATAGCTTTCAGGAATTGACTACTGTGGCTAAATTGAATGA TAGTTGACATGGACATGGGCATGTACTTTCTAATGTGGTAAATTTTTTGAATTACAGGCATGAGTGGGATAATTTGAAGA GCATGCTATCGTTTCAGCTGAAGCAGGTATGGGGAGGTATGCTAGCATGCATTCTTAAATGTATTGTCTTTGATTCTTGA AAGTATGCTAGCATATAGGCTTTTACATTTTTCTTGTATAATATAATAGTTGATTAATTATTATTCAAACATTGTAATTC GTACACTTTACATATTTGTTTTACAGGTGTTGTCAGAGTACCCTGAGGCAAAAGTTACTACTGAGGAGCAATATGCTTCA TTAGGAGAATCCTACTTTGAGTTAGTCCACAAATTGGATGAAGGTATCCCACTGTTAGTTCCCTCTTTTTTATGAGAATC ATCAATTTTATAAACATTAACTTTGAGACTTGAACATCATTATTTCTATATTGAAAATTATAGCGCTATTCCTTTAGTAA TTGTAAAAGTAATATGAAAATACTGTAAAAAATAAAAATATTAAAATTGCTTTTGATAAGTCAAATATTTTTTAGGGAAT ATTAGTCTTAGAGATATTCCAACACCGGAAATTCAAAATAGAACAGTCAGATATGCATAATATAAGAATATGTAATCTCA TACTAGTAAGCAAGAAGCATTGCATTCGATACTTCCTATGACGCAATTTCGAGTTCTATATACACAATATAAGTTTATCT ATGTATACAAAGGAATAATGGTAAAAAATAAAAATTGCTGTTCTCTCCTCCTCTGGAATATTATAGTTTCATACAATTTT CTTATAGACTGCACCGTGTTAACAGATAATGTCATTTATTTTAAAAACCTATTTTGGTGGCTTTGAGTAGGCCTGCATTT CTGTCTGAAAATTATCTTACTTAAAGAAACCAATGGTTAGAACTTAGAAGAGTATCCCTGAGAAATGAACTTCCAAGGAT TAGTATGAGTTACGTTGACCATTGCATTGATATCCCATCATCCTGGTTTCCAAATTTGCTCTAAATTATTTGAGAATTGA GACCATAATGAAGTAATCTCCAAAAAGGAATGTGAATGCCATTTTACTGCTAGTGATTTTCGGATCTCAAATTTCCTGGA CCCAACCCAGACCTATTTCATTCTTAACCCTTGACCTGCAACAAATATCTTGAATACTTAGATTGTCTCCTTTCAGATTA TATATATATTATATACTATGTTACCTTATTGCATAGGTTTTTCATATAATTACTTGCTTCACAATATTATGTTATTATTT TAGTTATGTCTGGGTAGAAGTTCCACTAAATTATCTTGATAATTTTATATGCTTTCTGGATTCCAGAACTTACATGTTTT ATTGATGGCCCACCATTCACGTTGCAAAGGCTTTGTGAGGTATGTCTGCTTCTTTGGTCTATTGCGCATTATTAAATCCC GGCACCGACATCCATTAAGTTTAATATGAAAATGTAGAATAATATTACTTTGTCTGATATTGCATTGAACAGATCTTATT GGACGCAAAAAGCATTTATCCAAATCTTTCAAAGCTTGCTTTAGCTCTTGAAAAGGTATGCTTCATTGCATGGCTGGTGT ATAGCTGTTCAAATTAGTAATTGTGAGAATTAATAACAATGAAAATCCTGTAGTTTGATTAGGATTGTCTCATGTGAATC CCAGAAAAAAAATTATTTATTTTTATTAACAGTACAGTACTTCAATTATAGATAGTTTGTTTGAACATTTGCTTGACTTA TGCCTGGTGTTTTCCTCTGTAGAACTTGTTAGTTACATCTACACTGGCAATCTCCACTGATCCATGCCCACAAGTTACAG TACAAGAGACAAATGAGCAGGAGAATGCCAGCGAGAAGCAGGAGCACCAATGTGAAAAGCAGGAGCACCAATGTGAAAAG CAGGAGCACCAATCCGATAGTGCCCAAAATGGCATTGAGCCTTCGGTAGCCACCGACAAGGATGAAGTAATGGCTGAGGC TGAGGCTGATACGCGGGATGATATGACCGTTGACACAGAAGCTTTTGAAGATGCTAAACCACCAGAAACAATTTCTGAGC CCAATTCTGAGACAAATTCTAATAGTGCATGAGTTTTGTGGTTACTGTAAACTCTGATGAGCATAGACTCAGATGTTTTC TCTTGGTGAGCTTCCAGTGCTGTGGATGGAACTTGGTCGTTGTTTCATGGTGCTTTCATCACTGACATGGTAATCCTTGG TGCTTAGAATTTAGCAACTCTTGAAATCAGGACGAGGTTTCTGTCTGTGTTGACACTGCTTGTATTGGTGGCATGAGCTT GAAATACTACACTGTAGATCTGTTTATTTAATCTGTGCTCTGAAGTTAAATTCACAAACTTATTTTGAACTTTCCAATCC TTGCCATCATTCCCTCTGCGGTGACTATAGTAGTTGTTACCTCTTGTGTTGGTTGGCTTTAGCCTTTAGTAACTAAAGAG ATCATCGTATCTACTTGTGACATCTTGCGCCAACAAATGTGCTTCATTTTTTGTACGTTTTAAACTTTAAAAATTGAAGT CTCTAGAATTAATGACGAGGGGCGCACATCGGCCTAGGAATAGCTACCCCAATGAGGGGGAGGTTCCAATTCAAGAGTAG TGGAGGTGTGGGCTCTATCACCTCATGGATTATTTTATTCTTTCTAAATCTCAAAGTATAACTTCTAGCCATTCCTCTCC ATTTAAAAATCATGACTTCATAAGAGTAATAGCAACATAGTTTGGTCTTTTTATTTCACTATTAAAATTCAAAAATCGCA TAAAACTTTTATTTTTCATTGGAAAGCAAGTATGTATACTACTATAAGTTCACAA
CDS sequence (LotjaGi3g1v0538200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGCAATCCTTCATTTTCTACTGTAGTTATCATGGAGCAACCACACCATGATTCGCCTCCTCCCGCCGCCGCCGCGAT GCCAGTTTCCGAAAATGATGCGGTGGCTGTGGCTGTGGCTGATGATGCTGATGCTGATGCTTCCAACCACAAAGACGTTG AACAGAAATTCGATGTTCCGAGGGAACAAGTTACACAGATTCTGCAAGCTATTGCATCCACTGGGAAATTCTGGCATGAG TGGGATAATTTGAAGAGCATGCTATCGTTTCAGCTGAAGCAGGTGTTGTCAGAGTACCCTGAGGCAAAAGTTACTACTGA GGAGCAATATGCTTCATTAGGAGAATCCTACTTTGAGTTAGTCCACAAATTGGATGAAGAACTTACATGTTTTATTGATG GCCCACCATTCACGTTGCAAAGGCTTTGTGAGATCTTATTGGACGCAAAAAGCATTTATCCAAATCTTTCAAAGCTTGCT TTAGCTCTTGAAAAGAACTTGTTAGTTACATCTACACTGGCAATCTCCACTGATCCATGCCCACAAGTTACAGTACAAGA GACAAATGAGCAGGAGAATGCCAGCGAGAAGCAGGAGCACCAATGTGAAAAGCAGGAGCACCAATGTGAAAAGCAGGAGC ACCAATCCGATAGTGCCCAAAATGGCATTGAGCCTTCGGTAGCCACCGACAAGGATGAAGTAATGGCTGAGGCTGAGGCT GATACGCGGGATGATATGACCGTTGACACAGAAGCTTTTGAAGATGCTAAACCACCAGAAACAATTTCTGAGCCCAATTC TGAGACAAATTCTAATAGTGCATGA
Protein sequence (LotjaGi3g1v0538200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCNPSFSTVVIMEQPHHDSPPPAAAAMPVSENDAVAVAVADDADADASNHKDVEQKFDVPREQVTQILQAIASTGKFWHE WDNLKSMLSFQLKQVLSEYPEAKVTTEEQYASLGESYFELVHKLDEELTCFIDGPPFTLQRLCEILLDAKSIYPNLSKLA LALEKNLLVTSTLAISTDPCPQVTVQETNEQENASEKQEHQCEKQEHQCEKQEHQSDSAQNGIEPSVATDKDEVMAEAEA DTRDDMTVDTEAFEDAKPPETISEPNSETNSNSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 45 | 271 | 227 | 2.0E-56 | ||
| Pfam | 63 | 269 | 207 | 2.4E-16 | ||
| MobiDBLite | 187 | 274 | 88 | - | – | |
| Coils | 188 | 217 | 30 | - | – | |
| MobiDBLite | 192 | 214 | 23 | - | – | |
| MobiDBLite | 230 | 258 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein phosphatase regulator activity | Modulates the activity of a protein phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a protein substrate molecule. | ||
| Cellular component | Protein phosphatase 4 complex | A protein serine/threonine phosphatase complex formed by the catalytic subunit of protein phosphatase 4 plus one or more regulatory subunits. |
Expression pattern of LotjaGi3g1v0538200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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