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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0541500 |
| Transcript ID | LotjaGi3g1v0541500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WEB family protein, chloroplastic; TAIR: AT5G16730.1 weak chloroplast movement under blue light protein (DUF827); Swiss-Prot: sp|Q9LFE4|Y5673_ARATH WEB family protein At5g16730, chloroplastic; TrEMBL-Plants: tr|V7AHF4|V7AHF4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0541500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:95838419..95842927) extracted from Lotus japonicus Gifu genome v1.2.
CAATTCTTTCAACCGTTTCTCAAACAAACAAGTGTAAATCCAAACAAAAATTGGAGAGAATTTGCTCTACCTCTAAAAAA GTTACTTGGGGAGTGGTGTGCCATTGACAAACTAAGAAAAAAAATCCACATGTTAGGGTTAGTTTTGTCCTTTCATGATT GCACCTGAAAATACACACATCCATCATCCATGATGCATGAGAGTTGAGAAGGAAAGGGTTGAGAATAAGACAGAGAAAAT TGATAGTGAGAGAGAGAAGAGAGAGAGAGAGAAAAAAGTAGTGTGGCCACTCTGGAGACACACAAAAACCAACTCAATTT TCTGGTTTCTGCTCTGTAAAATTCCCTCTCTGCTTCTTCAACCCCCATCTTCTCCTTTCAACAAAGCTTGAATCTTTTCA CTCACTCTCATCCAAAAATCCTTCTGGGGTTTCTTCTTTCAATGTCACAACTCTAGCATTCCCAATTCTGCAACTGCAAC TCACCCTTTCACCAAAGGCATCACCTTTGAAGATCAGAGACAACTTCTGCTACCATGGCGTCAAAATCCAGGTCAGTGAA GCTTGATTGATTATCCTGTGAAGATCTGATTTGGGTTCTCTAGCAGTTACTTTTCGTCTACTGCACTACTTTGTTTTTTT CTTTCATTTTTGGTCTGTGTGAATTTTTTCTGTTTGATAGGGTTTGATCTGGTAATTATGATATGCTATATTGAGAATTT TGCCTAAATTTTATACCTTTCCAATTCATGTGTTGAAATTCAAAATTGGGTTTCACTTCTTTATCATATTTAGTTATTTA CTTCTTATTCTGTCTTGATTCTGTAGAATTATGCTACTTCAGGTTTGTTATACTTTATTGATTGTATCACTGGCTGCTTT TGATTCTGATTAGTAGATTATAGTTGAAGTTATGATTCTTATTATGCTGAATTTGACATAAGAGTTGTTTTCTTGTGGCT TAGATCCATTTATTTGATTGGGTACAACTGTTGCACTTTGTTTTGTTATGTTTTACTGCATGTTTCACTTAATGTATGAT TGTTCTGGTATTGACATTATGAATTTGATAGATCCAATCTATCTGAAAATCCCAACAAAGCATCACTGGCAACGCCGAGA GTCAGTAAAGTTAGAAAGGTAGTGTCAAAATCACAATCTGATTCACCATCACCTCTGCAAAATTCACGCCCTTCTGTGGA ACGGTCGCCGCGATCTGTGAACTCAAAGCCCACTGTTGAGCGGAAATCACCAAGACCTCCATCCACCCCACCTGATGTAA GTTATACAGTGCACTTAGTGTCCTCTCTTTCTTTGAGATTCAGTCTTGTTTTTATTTATGGCCATTTTTTTGTTCATACC AAATTGCTGCACTTGAGTTGTTGTTTTCTTCATTTCCATTGCTATTTTTGGTATGAAGCATTTGAACTTCCTTACATCTC AAGTCCCCTGATAAGTATAAGGGAACATATGATTGTGTAAGGATGCGCAATGTATTATCCAGTCAGCTAGAGCTAATTAT CTGACATTTTTATTGGGACTTAAAATTTTAGATAATGCATTAATTCTTAACCTTTATTCTTAGGTCTTGACTATTTAGTT GCAAACTGCTGCAAATAATTCTTTCATTATTCTTGATAGTTGATCTAGCAGAATATTTTATTTAGTCATGATTTCCTTTA AAGGGTATCTGCACTCTGATCTGTGCATATGATGATCTATTCCTTGGTTTTTCAGAAACAAGCCCCAAAAGCAGAAAAGG GTTTAGAATTGCAGAACCAGTTGAATCTTCTTCAAGAAGATCTAAAGAAAGCAAAGGAGCAGCTCCTTCAGGCTGAGAAG GAGAAGGTAAAAGCTACTGATGAGTTGAAAGAAGCACAGAGAGTGGTTGAGGAAGCAAATGAGAAACACAGGGAAGCATT GGTGGCTCAAAAGCGGGCTGAGGAGAATTCTGAGATTGAAAAATTCCGAGCTGTTGAATTAGAACAGGCTGGAATTGAAA CTGTGAAAAAGAAGGAGGATGAATGGCAGAAAGAGCTTGAAAGTGTGAGGAACCAGCATGCTTTGGATGTGGCAGCTCTT CTCTCCACCACTCAGGAGCTTCAGCAGGTTAAACAAGAACTCGCCACGACTTGTGATGCAAAGAACCAAGCATTGAACCA TGCTGATGATGCGACTAAAATTGCTGAAACTCATGCAGAGAAAGCAGATCTTCTCTCAGCTGAAGTAACGCGGCTGAAGG CCTTACTAGATTCAAAAATGGAAACAGAGGCTAGTGAAAATGAGGTTATATTGAAGCTGAAAACAGAGATAGAAGCTCTC AAGCAAGAACTTGAACAGGCCAGGGTTTATGATGAGAAGCTGACAGAGAAAGAGACTTCTATCGAACAGCTCAATGTTGA GCTTGAAGCTGCAAAGATGGCTGAATCTTATGCACATAGTCTGCTAGAGGAGTGGAAGAAGAAGTTTGAGGAACTTGAAA TGAGGGTTGAAGAAACAAACAAGTTGGAGAGATCTGCATCAGAATCTTTGGAATCTGTAATGAAACAACTAGAAGGAAGC AATGATTTGTTGGATGATGCAGAATCTGAAATTTCAACTCTTAAGGAGAAGGTGGGATTGTTAGAAATGACAACTGGGAG GCAGAGAACAGAACTTGAGGATTCACAACACCGACTTCTTATGGCTAAGGAAGAAAATCTTGAATTGACAAAGAAGGTTG AGTCTCTCAAATCTGAACTTGAGACTGTTAAGGAAGAGAGAGATCAGGCTTTGAACAATGAACACCTTGCAGCTTCTAGT GTCCAGACCCTATTAGAAGAGAAAAACAAACTTATCAATGAATTGGAGAATTCTAGGGATGAAGAAGAAAAGAGCAAAAA GGCAATGGAAAGTTTAGCTTCTGCATTACATGAAGTATCTGCAGAAGCTAGAGAAACCAAAGAAAATATACTAAGTAGCC AAGCTGAAAAGGACAGCTATGAGAACCAGATTGAAGATTTAAAGTTAGTCTTAAAAGGTACTAATGAAAAATATGAGTCA ATGCTGGATGACGCACGGCACGAGATTGATGTTCTTATATGCAGTATTGAAAATTCTAAGAATGCCTATGAGAACTCCAA AGCTGAGTGGGAGCAGAGAGAATTTCATCTAGTCAGCAGTTTAAAGAAAAATGAAGAAGAGAACGTGTTCCTCGAAAAAG AAATAAATAGATTGGTTCATTTGCTTAAAGAAACTGAGGAAGAAGCTAGTGCTAACAGGGAGGAAGAAGCTCAGTTGAAG GAAAATCTGAAGGAAGTTGAGGGTGAGGCAATCCAGCTGCAGGAAGCTCTTAAGGAAGTGACGGCTGAGAACATGAAACT GAAGGAGAATTTATTGGATAAAGAAAATGAGATGCAGAGTATTTTTCAAGAAAACGATGAACTCCGATTTAGGGAGGCTG AATCTGTTAAGAAGGTGGAGGAGTTGTCTAAGTTGCTGGAAGAAGTTACAACCACAAACCACACTGACGAAAATGGGGAT CTTACAGACAGTGAGAAGGACTATGATTTGCTTCCTAAAGTGGTTGAATTTTCTGAAGAGAATGGGCATGGAGGAGAAGA CATTTCAAAGGTAGAGCTTCCAGCCAATCAGGAGGAACTCCAACATAGCTTACTAGAAGAAAGTATCTTGAATGACAAGA ATGAAGAGATTGAATTTCCCAAGCTTGAAGATGTGAATGGGAAAGTGAAGGAAGATGAGAGCAAAGAAAAAGATGACCCG GTAGAAGTTGAATTTAAAATGTGGGAGAGCTGCAAGATAGAGAAAAAGGAGTTCTCACCAGAGAGAGAACCAGAGCCTGA ATCATTTGAAGAGGACATTGAGTCGAAGATAGAAGAAGGCAGTGAGAGCTTTGACAAGATAAATGGCACCTCTGTAACAG AGAATATTGATGATGCATCAAAACAACAATTGAAGAAGAAGAAGAAAGCTCTGCTTGGCAAGTTTGGAAGCCTGCTCAAG AAAAAGAGTACTAGCAACCAGAGATAGAACAATATTCAAATTTGGAAGTTATATTGAACATTCAATTGTTTGTGTTTGCT TTATGTTTGTTGCTTCTCAGAATGTAATTTTTAAGGAATGAAGAGGCTTGTACTATTGTTCAAAATTTTAAGCCATTGCT TCTTTTGGGTTGTAGTTCTCTATGTTGTTTATGCAAAGTGTATGTGATGCAAATGCAACAGTTTTTCCCTCTTGCCCCCC ATATCTGTATCTTTATGTAATCCCAATTCAAATGAAAGTATAGACAGAAGAAATTCAGTGTTCAAGTGACGAGGATGGCA ATATACTTTTTGACACATTATTTCCATATATTTACTGAATGTATAGTATATGAGTCTCATTTACTAAGTGAGTTTAAGTT ACCATGTAATCAAATATATAATAATATAGGAAAACCAAAATTACAGCCAATTACAACTATTTTGGTCAACACAATTGATC TATGTTTATTTTTATCATAGAGAACCTGA
CDS sequence (LotjaGi3g1v0541500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTCAAAATCCAGATCCAATCTATCTGAAAATCCCAACAAAGCATCACTGGCAACGCCGAGAGTCAGTAAAGTTAG AAAGGTAGTGTCAAAATCACAATCTGATTCACCATCACCTCTGCAAAATTCACGCCCTTCTGTGGAACGGTCGCCGCGAT CTGTGAACTCAAAGCCCACTGTTGAGCGGAAATCACCAAGACCTCCATCCACCCCACCTGATAAACAAGCCCCAAAAGCA GAAAAGGGTTTAGAATTGCAGAACCAGTTGAATCTTCTTCAAGAAGATCTAAAGAAAGCAAAGGAGCAGCTCCTTCAGGC TGAGAAGGAGAAGGTAAAAGCTACTGATGAGTTGAAAGAAGCACAGAGAGTGGTTGAGGAAGCAAATGAGAAACACAGGG AAGCATTGGTGGCTCAAAAGCGGGCTGAGGAGAATTCTGAGATTGAAAAATTCCGAGCTGTTGAATTAGAACAGGCTGGA ATTGAAACTGTGAAAAAGAAGGAGGATGAATGGCAGAAAGAGCTTGAAAGTGTGAGGAACCAGCATGCTTTGGATGTGGC AGCTCTTCTCTCCACCACTCAGGAGCTTCAGCAGGTTAAACAAGAACTCGCCACGACTTGTGATGCAAAGAACCAAGCAT TGAACCATGCTGATGATGCGACTAAAATTGCTGAAACTCATGCAGAGAAAGCAGATCTTCTCTCAGCTGAAGTAACGCGG CTGAAGGCCTTACTAGATTCAAAAATGGAAACAGAGGCTAGTGAAAATGAGGTTATATTGAAGCTGAAAACAGAGATAGA AGCTCTCAAGCAAGAACTTGAACAGGCCAGGGTTTATGATGAGAAGCTGACAGAGAAAGAGACTTCTATCGAACAGCTCA ATGTTGAGCTTGAAGCTGCAAAGATGGCTGAATCTTATGCACATAGTCTGCTAGAGGAGTGGAAGAAGAAGTTTGAGGAA CTTGAAATGAGGGTTGAAGAAACAAACAAGTTGGAGAGATCTGCATCAGAATCTTTGGAATCTGTAATGAAACAACTAGA AGGAAGCAATGATTTGTTGGATGATGCAGAATCTGAAATTTCAACTCTTAAGGAGAAGGTGGGATTGTTAGAAATGACAA CTGGGAGGCAGAGAACAGAACTTGAGGATTCACAACACCGACTTCTTATGGCTAAGGAAGAAAATCTTGAATTGACAAAG AAGGTTGAGTCTCTCAAATCTGAACTTGAGACTGTTAAGGAAGAGAGAGATCAGGCTTTGAACAATGAACACCTTGCAGC TTCTAGTGTCCAGACCCTATTAGAAGAGAAAAACAAACTTATCAATGAATTGGAGAATTCTAGGGATGAAGAAGAAAAGA GCAAAAAGGCAATGGAAAGTTTAGCTTCTGCATTACATGAAGTATCTGCAGAAGCTAGAGAAACCAAAGAAAATATACTA AGTAGCCAAGCTGAAAAGGACAGCTATGAGAACCAGATTGAAGATTTAAAGTTAGTCTTAAAAGGTACTAATGAAAAATA TGAGTCAATGCTGGATGACGCACGGCACGAGATTGATGTTCTTATATGCAGTATTGAAAATTCTAAGAATGCCTATGAGA ACTCCAAAGCTGAGTGGGAGCAGAGAGAATTTCATCTAGTCAGCAGTTTAAAGAAAAATGAAGAAGAGAACGTGTTCCTC GAAAAAGAAATAAATAGATTGGTTCATTTGCTTAAAGAAACTGAGGAAGAAGCTAGTGCTAACAGGGAGGAAGAAGCTCA GTTGAAGGAAAATCTGAAGGAAGTTGAGGGTGAGGCAATCCAGCTGCAGGAAGCTCTTAAGGAAGTGACGGCTGAGAACA TGAAACTGAAGGAGAATTTATTGGATAAAGAAAATGAGATGCAGAGTATTTTTCAAGAAAACGATGAACTCCGATTTAGG GAGGCTGAATCTGTTAAGAAGGTGGAGGAGTTGTCTAAGTTGCTGGAAGAAGTTACAACCACAAACCACACTGACGAAAA TGGGGATCTTACAGACAGTGAGAAGGACTATGATTTGCTTCCTAAAGTGGTTGAATTTTCTGAAGAGAATGGGCATGGAG GAGAAGACATTTCAAAGGTAGAGCTTCCAGCCAATCAGGAGGAACTCCAACATAGCTTACTAGAAGAAAGTATCTTGAAT GACAAGAATGAAGAGATTGAATTTCCCAAGCTTGAAGATGTGAATGGGAAAGTGAAGGAAGATGAGAGCAAAGAAAAAGA TGACCCGGTAGAAGTTGAATTTAAAATGTGGGAGAGCTGCAAGATAGAGAAAAAGGAGTTCTCACCAGAGAGAGAACCAG AGCCTGAATCATTTGAAGAGGACATTGAGTCGAAGATAGAAGAAGGCAGTGAGAGCTTTGACAAGATAAATGGCACCTCT GTAACAGAGAATATTGATGATGCATCAAAACAACAATTGAAGAAGAAGAAGAAAGCTCTGCTTGGCAAGTTTGGAAGCCT GCTCAAGAAAAAGAGTACTAGCAACCAGAGATAG
Protein sequence (LotjaGi3g1v0541500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASKSRSNLSENPNKASLATPRVSKVRKVVSKSQSDSPSPLQNSRPSVERSPRSVNSKPTVERKSPRPPSTPPDKQAPKA EKGLELQNQLNLLQEDLKKAKEQLLQAEKEKVKATDELKEAQRVVEEANEKHREALVAQKRAEENSEIEKFRAVELEQAG IETVKKKEDEWQKELESVRNQHALDVAALLSTTQELQQVKQELATTCDAKNQALNHADDATKIAETHAEKADLLSAEVTR LKALLDSKMETEASENEVILKLKTEIEALKQELEQARVYDEKLTEKETSIEQLNVELEAAKMAESYAHSLLEEWKKKFEE LEMRVEETNKLERSASESLESVMKQLEGSNDLLDDAESEISTLKEKVGLLEMTTGRQRTELEDSQHRLLMAKEENLELTK KVESLKSELETVKEERDQALNNEHLAASSVQTLLEEKNKLINELENSRDEEEKSKKAMESLASALHEVSAEARETKENIL SSQAEKDSYENQIEDLKLVLKGTNEKYESMLDDARHEIDVLICSIENSKNAYENSKAEWEQREFHLVSSLKKNEEENVFL EKEINRLVHLLKETEEEASANREEEAQLKENLKEVEGEAIQLQEALKEVTAENMKLKENLLDKENEMQSIFQENDELRFR EAESVKKVEELSKLLEEVTTTNHTDENGDLTDSEKDYDLLPKVVEFSEENGHGGEDISKVELPANQEELQHSLLEESILN DKNEEIEFPKLEDVNGKVKEDESKEKDDPVEVEFKMWESCKIEKKEFSPEREPEPESFEEDIESKIEEGSESFDKINGTS VTENIDDASKQQLKKKKKALLGKFGSLLKKKSTSNQR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 19 | 19 | - | – | |
| MobiDBLite | 1 | 83 | 83 | - | – | |
| PANTHER | 11 | 836 | 826 | 0.0 | – | |
| PANTHER | 11 | 836 | 826 | 0.0 | – | |
| MobiDBLite | 27 | 64 | 38 | - | – | |
| Pfam | 80 | 644 | 565 | 3.2E-9 | ||
| Coils | 83 | 145 | 63 | - | – | |
| Coils | 161 | 181 | 21 | - | – | |
| Coils | 252 | 303 | 52 | - | – | |
| Coils | 311 | 331 | 21 | - | – | |
| Coils | 339 | 373 | 35 | - | – | |
| Coils | 381 | 422 | 42 | - | – | |
| Coils | 427 | 506 | 80 | - | – | |
| Coils | 550 | 633 | 84 | - | – | |
| MobiDBLite | 657 | 676 | 20 | - | – | |
| MobiDBLite | 764 | 812 | 49 | - | – | |
| MobiDBLite | 773 | 787 | 15 | - | – | |
| MobiDBLite | 793 | 807 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0541500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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