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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0546900 |
| Transcript ID | LotjaGi3g1v0546900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Stachyose synthase; TAIR: AT4G01970.1 stachyose synthase; Swiss-Prot: sp|Q93XK2|STSYN_PEA Stachyose synthase; TrEMBL-Plants: tr|I1NBD9|I1NBD9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0546900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:96337556..96343441) extracted from Lotus japonicus Gifu genome v1.2.
GCTGGAGAGGATTTTGGGCCGGAGAGGATCCCAATCCTAATGAACATAACTCGGTGCCTCATATAATTTTCTTCCATTTT AACCGCTTAAATCACAAGTTTCCTCAATTGAATCACTTGTCATATGTTGCATTTTTCGATTACAATCATTCCAGAATCCT CAGCAAAAAACCTTGATTATTTCTTTCCTTTTTCACAGTGATTCAGTTTCTTGCTAACCAAGATTTGTTGAACCACCTGG TTTGTGTATATATACACCACCCCAGATAGCATGTTCTCTACACACTTCTCAAACCAACCTTGAAAATTTCCCTTCTTTTG AACCCTTTCACTCCCATTTCCAATGGCTCCTCCCAATGAACCAGTTAACCCCACCCTCAGTTCTGAGCCTTTGGAACAGA TTTTCCATTTGTCTGATGGAAAATTCACTGTGAAAACTGTTCCTTTGCTGTCTCAGGTTCCTCAGAATGTCTCTTTCACT CCCTTTTCCTCTGTTGAATCTGATGCCCCACCTTCCATTCTTCACCGTGTCCTTGCTAGTTCCCACAAAGGTGGATTCTT TGGGTTTTCCCAGGAAACCCCATCTGACAGATTGATGAATTCCTTGGGTAGTTTCAGTGGGAGGGACTTCCTTAGCATTT TCAGGTTCAAAACATGGTGGTCTACTCAGTGGGTGGGGAATTCTGGTTCTGATCTTCAAATGGAAACTCAGTGGGTTCTC ATTGATGTTCCTGAGATTAAGTCCTATGTGATCATCATTCCCATCATTGAAGGGAGTTTCAGGTCTGCTCTCTTTCCTGG CTCTGATGGGAATGTTATGATTGGTGCTGAGAGTGGTTCCACACAAGTGAAAGCTTCAAGGTTTCATTCCATTGCCTATG TTCATGTCTCTGAAAACCCTTACAATTTGATGAGAGAGGCCTATAGTGCTCTCAGGGTTCATCTCAACACTTTCAGGCTC TTGGAAGAGAAAACTTTACCAAGCATGGTTGATAAGTTTGGTTGGTGCACTTGGGATGCTTTCTATTTAACTGTGGACCC TGTTGGAATCTGGCATGGTCTTAAGGATTTTGCTGAAGCCGGTTTCGCACCGAGGTTTTTGATTGTTGATGATGGATGGC AGAGTATCAATTTGGATGGTGATGACCCCCATGAAGATGCAAAGGGTCTTATTCTTTGTGGTGGCCAAATGTCTGCAAGG CTTCACAGGCTAGATGAGTGTGAAAAGTTCAGAAATTACCAACCTGGTCTCATGTTGGGCCCGGATGCTCCTCCTTTCAA TCCAAAACCGAGAAAGGACTTGATTGCAAAGGCATTTGATCGCGAGCATTTGGAGATCCAACGCGACGAAGCTATCGAAT CTGGAAGTTCCAATGTGGCTGAGATTGAAACTAAGCTCCAGCAGGTGGTAAAGGAAATCAATGATATCCTTGGGGGAATC CAATTGCTAAGCAAAAGAGAATGTGGAACAAGTGGTAGGTTGAAGGCTTTCACCAAGGACTTGAGGACTTGTTTCAAGGG TTTGGATGATATTTATATGTGGCATGCAGTTTGTGGTGCCTGGGGTGGTGTGAAGCCAGGAGCTACACATTTGAACTCAA AATTAGCCCCTTGCATAGTCTCACCTGGCCTTGATGGGACAATGCCTGATCTTGCTGTGGTTAGAATAGTCAATGGTTCA ATTGGGCTTGTTCATCCTGAACAAGCCAATGACTTGTACAACTCCATGCACTCTTACCTTGCTGAATCTGGTGTCACTGG AGTCAAAGTTGATGTCATGCAAGTGAGTTTTCTATTCCTTATAACATCTAGAGAATCACTTCTAGTTCTTAACATAGTAA ACATGCATTCGATTTTACCAAACATGCAATTCATGTGAGTTTTCTTGTCCTTACAACATGGTGAAACGCCCGAGAATCAC TTCTATCTAGAAGCTACAACAAGTCTTAACTTATTGGTTAACATACATTTGATTTTACCAAATATGCTATAGTATTCTGT GTATGATTTAAACAATTATTGGCATACTTTGGTTGTTTATTACTTTTTTCATAATGCAGTCTATTGAATATGTAAGTGAG GAATATGGAGGCAGGGTCGAGCTTGCAAAGGCTTACTATGATGGGTTGACAGACTCCATCATCAAGAATTTCAATGGAAA TGGAATCATTGCCAGCATGCAGCAGTGCAACGACTTTTTCTTCCTGGGAACTAAGCAAGTTTCCATGGCAAGAGCTGGTA AGCACTAAGCAGTATACATAGGCATATTCATATGAAATTGAAGAAAAAGAATTTTGAGAATATGAAATAATTATTCTAAA TGAATCTATGACACATTGATGCTATTTATTTCAGTAACTAATCAAACTACTCTAACTAACTTGTAACCATCTAATGATTA CAGTCTAACAGATTTAGCTATCATTAACTAACTCTAATTAAACTGTTATTATGTGTATTGAGCTTTATTTTTTTTATAAT TTAGTCACATTGTTGGGGTCAAAATCTTTAATTAACCAAAATCTGTTTCAGGGGATGACTTTTGGGTCCAGGGTCCCAAT GAAGACCCAATGGGAGTTTTTTGGCTACAAGGTGTGCACATGATTCATTGTTCCTACAACAGCTTGTGGATGGGGCAAAT GATTCAACCTGATTGGGACATGTTTCAATCAGATCATGTGTGTGCCAAGTATCATGCAGGTTCAAGGGCTATTAGTGGTG GTCCAGTCTATTTCAGTGACCATGTAGGTTCCCATGACTTTGATCTGATTAGGAAGCTTGTGTTCCCTGATGGGTCCGTG CCCAAATGCATACATTTCCCCCTTCCAACCAGAGATTGCCTTTTCAAGAATCCTCTATTCGACCAAGAAACTGTTCTCAA ACTTTGGAACTTCAACAAGGTACCTATCTTAATCTTACTGCCATACATGTTTTGCACAAAACCTCTATTATAGTATGTTG TATTAAATTGCCTTTTTAGTTTTCATCTTTTGTGTTTGTATAAAACTAGAGTGGTACAAAATTGGATTAGGGTTACCTGC AGTGAGGGCAATCAAGATTTAATGTATGTACGATTCTATCAAGGAATCCTACTTAGTACGAAATTACTGTTAGAGAGTTC CGTCAACTTTTCTCTTACAACGCATGTCAATTAAAAATGACATGAGTAGTGCACTTACTTACAAACTTAATATTTAATTG AGATTTCAAAATTTGAATTTTATTGTTGGGAGATAGAATGTGTGTTTGGGGTCAGAAGATTTCAACCGTTTTGAAACATA ACCTAGTAGTTATTTGGTTGATTATGATATGTTATGTAACAGCAAATTTTTTCATTCAATTACAGTATGGAGGAGTGATT GGTGCTTTCAACTGTCAAGGAGCTGGATGGGACCCTAAGGTGCAAAAAATAAGGGGTTTCCCTGAGAGTTACAAGCCACT GTCTGGTTCTGTGCATGTAACTGAGATTGAATGGGATCAGAAAAAAGAAGCATCCCACATGGGTAAGGCGGAGGAGTACA TAGTCTACCTCAATCAAGCTGAAGAACTCTTTTTGATGACCCCCAAGTCTGAACCAATTCAAATCACCATCCAACCTTCA ACCTTTGAACTCTACAGCTTTGTCCCAGTCACAAAGGTAGGTGGTGGCAGCATCAAATTTGCACCAATTGGGCTGACAAA CATGTTCAACAGTGGAGGTACAATCCTAGAGTTGGAATGTGTTGACCTTGGTGCTAAGCTTAAGGTTAAAGGTGGTGGGA ACTTCCTTGCTTACTCAAGTGAATCTCCAAAGAAGCTCCAATTGAATGGTTCTGAGGTCACTTTTGAGTGGCTGCCAAAT GGAAAATTGTCTCTCAACCTTCCTTGGATCGAAGAGAATGGAGGGGTTTCTGATTTGGCATTTTTCTTCTAGATATATTT TGTTTTGGTTCTTACTTTAAAACAATTTTGGGACTTGGTTTGTTTTTTCCATTACCAAGTAGCGATTGGGAATGGTTTTA TGTAATGGATTTTACCATTCTCTAGTATATCGCTTTTTCTTTTTGCTGAAGTTTTTCGTGGTAAACTTTTGTTGAAGTTT TAATAAACTATAAATCCTTTTGGTTTGCTATTTCATTATTACAATAATAATGCGGGTTTGTTGCTTACAAGCCAAGAAAA CTAAGCAATTTACCTGTTTTTCAGATGTGTCTTTGTTAATTGGCACCGATTTATTGCAGTCTCAATAAGAGTGAGAAGGA GAACATTAATTGTGGCCTAGCTAGCCATGGCTATTAACTTCTTGTCTAGATTATGTTTTCTGTTGATGAAGACCATAGGA TTCAATTTAGTATTAATTATAGTTGCAATTATTTCTATTATTTTCTACTATTCCTCTCCTCAAACTGTTCGAACAAATGG ACAACACTCCTGATATGAAAGTATGAACTACGTGCTTCAAATCCTGATATGAAAGTTGAAGCTAAAGGTTCAACATAGGT TTGAATTATTGTATTTTAGATCTACTTTCAGCATTTTTCTTTGTGTCCATACCCATGTCTTTCCTCTGTCTTTATTTAGT CTCATAATACATTTAGTGAGCTTGCAGATTGTGCTTACTATTTTCTAATTATGTGTTTCTTGCATGTGGGGTTGGGCTTT GGAAATGGGGTAGTTGATGATGTTTTCTTTGTCCCTGGATGTAGTATCAGAGGGTTTGTTTTTGCTCAGGGGTAATCTTT GTTGAAGGGTTGTCTTATTTAATAATTCACTTTGTTTCTGAAATTGCTATATTATGACTTTCTTGGTGGAATTATTATGT TATTAGTGAAGAGATCCATTTATGTCTGTGAGGTATATAACAAAGAATAAAATCTTGTTTGCCCTGAGTCCCTGACTGAG TCATCTATAAACAGAATTTCTTTCCCAGAGTATTATAGTCATCATGTTTATAGTTTGTGCATTGATCAACCTCCAACATC AATTTTCTTAGTTTTCAAGATTCTCCGAACTTCACCCTTGACATGCATACTGCAATTAGTCACCCTTTGTTATGATCATA TGAAATTTCACTTGTATGTATGTTTACTTGTTGATATTCATGTCTCCTATCTGCTTCTATGCTCATATAATAATTCCTCT TTTTTGTTGATTGAGCTTTTGTCATTCTTCTCTGCATGAATTTTTTTATGATCATATGATGCTATAGAACTCATTCCTTC TGATCTATTATCTTTGAGTGGTTAAAGTAGTTATAAAAACAATTCAGTATCTGCAACAATTCAGTGCTACAGGCTTAGTC ACTCTCTTGTCTGGCCAAACCAAAGAAGTAGTTTCAGTTGAGGAAACTGTGACAGATTCCTCTTGAGAGGGCTACTGCCT GATACTGTCTAAGCTGTCAAAGTAGCTAAAAGGGATGTTATGGGGTGTTTAGACTCAATTTGATCGATATGCAGAGTTCC GTAATGAAGTTTTTACTTGCTTATAGACTCAATAGGCATTGTTCGTTTATTTCATAACCAATGACAAGTTTGGTGCCTAA GGAATAGTTCATTTGAACTCATCTTATATTATAAACACTTAAGCTGGTGTTTGACAAACTTATGACCTAATTATGAGTTT TGTTGATTATTTTAATAGACATCTCATACTAGATCATGGATAGGAGTACTTATGTATAAATTTTTTGAAAGTTTATTGCA ATAAGCTTCTTAGACATAAGCAGTTAATTAAAACTTTTATCCAATTGCTGTTATTTATACACGATACAGTAGCCATTAGG TAATATGAGTTTATTATGTGAAAAGGGGAAGGAATTGCAGTCCAAGTAAGCATGTGATTCTTTTCCAAGTATTACATAAA AAGAGAAAGAAAGTTCTTTTTTAAGTATCTGGCAATTTAATTTGAT
CDS sequence (LotjaGi3g1v0546900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCCTCCCAATGAACCAGTTAACCCCACCCTCAGTTCTGAGCCTTTGGAACAGATTTTCCATTTGTCTGATGGAAA ATTCACTGTGAAAACTGTTCCTTTGCTGTCTCAGGTTCCTCAGAATGTCTCTTTCACTCCCTTTTCCTCTGTTGAATCTG ATGCCCCACCTTCCATTCTTCACCGTGTCCTTGCTAGTTCCCACAAAGGTGGATTCTTTGGGTTTTCCCAGGAAACCCCA TCTGACAGATTGATGAATTCCTTGGGTAGTTTCAGTGGGAGGGACTTCCTTAGCATTTTCAGGTTCAAAACATGGTGGTC TACTCAGTGGGTGGGGAATTCTGGTTCTGATCTTCAAATGGAAACTCAGTGGGTTCTCATTGATGTTCCTGAGATTAAGT CCTATGTGATCATCATTCCCATCATTGAAGGGAGTTTCAGGTCTGCTCTCTTTCCTGGCTCTGATGGGAATGTTATGATT GGTGCTGAGAGTGGTTCCACACAAGTGAAAGCTTCAAGGTTTCATTCCATTGCCTATGTTCATGTCTCTGAAAACCCTTA CAATTTGATGAGAGAGGCCTATAGTGCTCTCAGGGTTCATCTCAACACTTTCAGGCTCTTGGAAGAGAAAACTTTACCAA GCATGGTTGATAAGTTTGGTTGGTGCACTTGGGATGCTTTCTATTTAACTGTGGACCCTGTTGGAATCTGGCATGGTCTT AAGGATTTTGCTGAAGCCGGTTTCGCACCGAGGTTTTTGATTGTTGATGATGGATGGCAGAGTATCAATTTGGATGGTGA TGACCCCCATGAAGATGCAAAGGGTCTTATTCTTTGTGGTGGCCAAATGTCTGCAAGGCTTCACAGGCTAGATGAGTGTG AAAAGTTCAGAAATTACCAACCTGGTCTCATGTTGGGCCCGGATGCTCCTCCTTTCAATCCAAAACCGAGAAAGGACTTG ATTGCAAAGGCATTTGATCGCGAGCATTTGGAGATCCAACGCGACGAAGCTATCGAATCTGGAAGTTCCAATGTGGCTGA GATTGAAACTAAGCTCCAGCAGGTGGTAAAGGAAATCAATGATATCCTTGGGGGAATCCAATTGCTAAGCAAAAGAGAAT GTGGAACAAGTGGTAGGTTGAAGGCTTTCACCAAGGACTTGAGGACTTGTTTCAAGGGTTTGGATGATATTTATATGTGG CATGCAGTTTGTGGTGCCTGGGGTGGTGTGAAGCCAGGAGCTACACATTTGAACTCAAAATTAGCCCCTTGCATAGTCTC ACCTGGCCTTGATGGGACAATGCCTGATCTTGCTGTGGTTAGAATAGTCAATGGTTCAATTGGGCTTGTTCATCCTGAAC AAGCCAATGACTTGTACAACTCCATGCACTCTTACCTTGCTGAATCTGGTGTCACTGGAGTCAAAGTTGATGTCATGCAA TCTATTGAATATGTAAGTGAGGAATATGGAGGCAGGGTCGAGCTTGCAAAGGCTTACTATGATGGGTTGACAGACTCCAT CATCAAGAATTTCAATGGAAATGGAATCATTGCCAGCATGCAGCAGTGCAACGACTTTTTCTTCCTGGGAACTAAGCAAG TTTCCATGGCAAGAGCTGGGGATGACTTTTGGGTCCAGGGTCCCAATGAAGACCCAATGGGAGTTTTTTGGCTACAAGGT GTGCACATGATTCATTGTTCCTACAACAGCTTGTGGATGGGGCAAATGATTCAACCTGATTGGGACATGTTTCAATCAGA TCATGTGTGTGCCAAGTATCATGCAGGTTCAAGGGCTATTAGTGGTGGTCCAGTCTATTTCAGTGACCATGTAGGTTCCC ATGACTTTGATCTGATTAGGAAGCTTGTGTTCCCTGATGGGTCCGTGCCCAAATGCATACATTTCCCCCTTCCAACCAGA GATTGCCTTTTCAAGAATCCTCTATTCGACCAAGAAACTGTTCTCAAACTTTGGAACTTCAACAAGTATGGAGGAGTGAT TGGTGCTTTCAACTGTCAAGGAGCTGGATGGGACCCTAAGGTGCAAAAAATAAGGGGTTTCCCTGAGAGTTACAAGCCAC TGTCTGGTTCTGTGCATGTAACTGAGATTGAATGGGATCAGAAAAAAGAAGCATCCCACATGGGTAAGGCGGAGGAGTAC ATAGTCTACCTCAATCAAGCTGAAGAACTCTTTTTGATGACCCCCAAGTCTGAACCAATTCAAATCACCATCCAACCTTC AACCTTTGAACTCTACAGCTTTGTCCCAGTCACAAAGGTAGGTGGTGGCAGCATCAAATTTGCACCAATTGGGCTGACAA ACATGTTCAACAGTGGAGGTACAATCCTAGAGTTGGAATGTGTTGACCTTGGTGCTAAGCTTAAGGTTAAAGGTGGTGGG AACTTCCTTGCTTACTCAAGTGAATCTCCAAAGAAGCTCCAATTGAATGGTTCTGAGGTCACTTTTGAGTGGCTGCCAAA TGGAAAATTGTCTCTCAACCTTCCTTGGATCGAAGAGAATGGAGGGGTTTCTGATTTGGCATTTTTCTTCTAG
Protein sequence (LotjaGi3g1v0546900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPPNEPVNPTLSSEPLEQIFHLSDGKFTVKTVPLLSQVPQNVSFTPFSSVESDAPPSILHRVLASSHKGGFFGFSQETP SDRLMNSLGSFSGRDFLSIFRFKTWWSTQWVGNSGSDLQMETQWVLIDVPEIKSYVIIIPIIEGSFRSALFPGSDGNVMI GAESGSTQVKASRFHSIAYVHVSENPYNLMREAYSALRVHLNTFRLLEEKTLPSMVDKFGWCTWDAFYLTVDPVGIWHGL KDFAEAGFAPRFLIVDDGWQSINLDGDDPHEDAKGLILCGGQMSARLHRLDECEKFRNYQPGLMLGPDAPPFNPKPRKDL IAKAFDREHLEIQRDEAIESGSSNVAEIETKLQQVVKEINDILGGIQLLSKRECGTSGRLKAFTKDLRTCFKGLDDIYMW HAVCGAWGGVKPGATHLNSKLAPCIVSPGLDGTMPDLAVVRIVNGSIGLVHPEQANDLYNSMHSYLAESGVTGVKVDVMQ SIEYVSEEYGGRVELAKAYYDGLTDSIIKNFNGNGIIASMQQCNDFFFLGTKQVSMARAGDDFWVQGPNEDPMGVFWLQG VHMIHCSYNSLWMGQMIQPDWDMFQSDHVCAKYHAGSRAISGGPVYFSDHVGSHDFDLIRKLVFPDGSVPKCIHFPLPTR DCLFKNPLFDQETVLKLWNFNKYGGVIGAFNCQGAGWDPKVQKIRGFPESYKPLSGSVHVTEIEWDQKKEASHMGKAEEY IVYLNQAEELFLMTPKSEPIQITIQPSTFELYSFVPVTKVGGGSIKFAPIGLTNMFNSGGTILELECVDLGAKLKVKGGG NFLAYSSESPKKLQLNGSEVTFEWLPNGKLSLNLPWIEENGGVSDLAFFF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 850 | 850 | 0.0 | – | |
| PANTHER | 1 | 850 | 850 | 0.0 | ||
| Pfam | 21 | 833 | 813 | 0.0 | ||
| SUPERFAMILY | 214 | 267 | 54 | 9.48E-8 | ||
| SUPERFAMILY | 380 | 621 | 242 | 8.43E-33 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0546900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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