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LotjaGi3g1v0551600.1

Overview

Field Value
Gene ID LotjaGi3g1v0551600
Transcript ID LotjaGi3g1v0551600.1
Lotus japonicus genome version Gifu v1.2
Description Aldo/keto reductase family protein; TAIR: AT5G62420.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|Q9SQ64|COR2_PAPSO Non-functional NADPH-dependent codeinone reductase 2; TrEMBL-Plants: tr|I1LNU9|I1LNU9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0551600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:96872184..96877253) extracted from Lotus japonicus Gifu genome v1.2.

GTTATCTCTTCCAAAATAAAATGCAATATATTAATCGGACATGAATAAACTATAAAGTAACTAGTATAAACTAACTTCTT GAATCTATAAATAGTCCAATGTTTGAGACTTATTAGCATAGAGGCAAAAGCTAGAAACACACTACACAGAGGGGGGAAAG CTAGAAACATACAAGAAAAGGGATAGAGAGAATGAGAAACAATCATGTGCGTTTGAACTGTGGCATTACAATGCCTCTCA TTGGATTTGGCACTTACTCCTTCCCAAATGATAAGAGGACAACAGAACATGCCATCCACAATGCACTTCAGGTACTAACC AAAATCAATTCTGGGAGCTCATATGATATGAGTAGCTTCTGTGTACTAGTAATGACGTGTTTGGATCAGCTTATTTTTCT TCATAATTAATTCTGGCATCTAGATTTAATTTGACATGCTTTCTATTGTTCTTAATTTTCTTATTATTGATACACTAGCT TGTATTGCAGATGGGTTATAGGCATTTTGATACAGCAAAAATATATGGTTCTGAGCCAGCAGTGGGGAAAGCCTTAAATG AGACAATCTACATGGGAGAAATAGAAAGGGAAGACATTTTCGTGACATCAAAACTGTGGGGGAGTGATCACCATGATCCT GTTTCTGCATTGAAACGAACTCTAGAGTAAGTAAATAGAATTTGTAAGTGTTTCGGAAAGTGTTATTTTCTCATTTTTCA TACTTTCTAAAGATCAATTAAACGGCCTCTATAAATCTAATTTTAATTCTTGAAAAGCTTAAAATGAATGTCTTCTATCT TTCATGGATGAAAATGATAATTTTTATACTTTATGAACTAAATCAATTTAACTTTTTTTTGAAACAATGAAGTAAGCTTG TGGTCCAGGATAAGTATGTCATGCCCTGTAAATAGGGCCGAGAAACATTTATGTGATAGAATCTTTTTAATATCAAAGTT GATTCTGAAGATTGGAATCAAAATCGGTGTTGGAAATCTAATATTGATTTTGTTCATTTTGTTTACTTGAATCAATGCAA AACAGGAATCTGGGCATGGAATATCTTGACATGTATCTAGTGCACTGGCCTGTCAAGTTGAAGCCATGGGTTAACTACCC TGTGCCTAATGAAGATGACTTTGAAAGTTTGGACCTTGAGACCACATGGGCAGGGATGGAGAAGTGCCTAGAAATGGGGT TGTGTAGGTGCATTGGGGTTAGCAATTTCTCTAGCAAGAAAATTGAGTGGCTATTAGATTTTGCTTCTACACCTCCAGCT GTTAACCAGGTAATTAGAACTTGATTTTTTTTATACATCGGGACAGAACTTGATCTTAAGGATCACTTGTAAACTATTTA TTAATGAGTAAACCACAATTTTGGTCCTTTCAAAGATATCAGATTGGCCACTTTAATCCATGAAAGAATGAAATTACATA TTTAATCTCTTAAAGGTGAAAAAGACGATTCATATGGTCATTTGACAACCTTATTTCAACCCTTAAAAATGATTGAATTG ATCATCATCTTTTTCAGTTTCAAAGACAAAAAAATTGTAATTTTTTTTAGTGATTAAATTGACCGACTCGATATCTTTCA GCAGTGAAAACGGTAATTCACTCAACCTATGTATGCAAGATAAAGGAGAAAACTTTTGTTAGGCTTCCGGGGAACCAACA TAAAACTGATATCTTTAATGTGGTCCATATAATCGACTTTGCTTATTGAGATAATGCTTTTTGTTTGTTTGTATGTTTGT TTGCAATATATTAACTCACTGAATCTTGGTTGTCAGGTTGAAATGCATCCAATGTGGAGGCAAGGAAAGCTCAGAGAGAC ATGTGGAGACCACAAGATCCATGTAAGTGCTTACTCACCACTTGGTGGACCAGGGAATGCTTGGGGATCTACAGCAGTGG TTGATCATCCAACCATCAAATCAATTGCCCACAAACACAAAGCAACTCCAGCACAGGTAAAACTAAACCCAAAGCATAAT TTAACCAATACTATTATGCAATTGATATGAATCTTGTCATTAGTAGAACGAAAAGTTGTAGTTTGTGTACATCTTGATGT ATGTTTTAATTGTGGTTTCTGAAGGTTGCATTGAATTGGGGACTATCAATGGGCTCAAGTGTAATTGTGAAAAGCTTCAG TCAAGAAAGAATGAAGGAGAATATAGGAGCATTTGATCTGAAATTGGATGATGAAGATATCTGGGAGATCGAGGAATTGG AGGAATTGAAGATCATGAGAGGGGAATTTCATGTTAATGAAACCACAAGTCCCTACAGAACAATTGAAGAGCTTTGGGAT GATGAAATTTGAAACCCATAGTCATTGTAATTCATTTACTCCAAAAGAGGAGAAGGAGGAAAAATGAATGGGAAAAAAAT CCAAATCATAAAATTGTTGTCATTTCTGTGACTAGATTCTTCATTGCTTAAGAGTGAGAATCCTAATGCTGATTATTTAG AATGAAAAAAAAAATGGAGCACTTATTTTGTACAACAAAACTTTCCTTGCCAGTATCGTCACTGTAACTACATTTTACTC AAGTAGTTATTTAAAGCATTACGTGACTCCAAATCCAACTTACTTGAATGCAGGAGAAACTGAATAAGAGATAGGAAGTA AAAGTGAGTGGAAATGACATGGAAGAGAAAGTGAAAGTGTGAATGAATCAAAACTCAGAAAGAATAGCTAAACCATGCAT ATAAAAGCAATTCGGTCAACGTTTTGGTACAAGGGACATCTACTCAAATCAGAAATTTCCAATTCACATAACCAGTGCAG AACCAAGTGATATTCACAATTATGAAGCTATCACTCTACCAGACGTCAGACTCCATTAGCAAAACAGGATAATTGTTAAA CAAGTACACATTCCACAAGAGGATGAACACATAACAATATGAACATCTTATATAGGCTTGATCTTGAAGTGAAGTGAAAT AAGAGAGAAGACAAAGCACTTCAAATCCTGCAAAAAGTAATTATAATAAGAAAAAAAATACACGCATTAGTGGAGATAAA TCAAATGTGGCAATCAGAAAATTAATGGGAAGGTACTAATATTGACTAAGGACTTGTGCTTCAAAAGAATAGGTTCATAT CCCTTGAATGCAAGGGAACTAAGGAACCGGTCTATGCGCTTCAGTCATCAACACCTTCTACTCATAGATGGAATTCAAAT TTATGTCTTTATCTTTCAAGGATCTATATTTCTTACTTCTTTTTTAACAGTTCAGGATCCAAGTTCCATCTTGGCTCCAC TATAAAGCTTGAGTAGGTTTAATTTAAACTCTTGAACTGAATGTAATCCCAAAATTTATCCGCAAATTATACACAAATCA TAACCTGACACCTTAAACCAAATCTTATCACTCCAGCCAATTTTAAACATGTTAACACGACCTAAGCACCTAAACCAAAT ATAAACATGCACACCACACCAAACCATACATGCAACAAACTGGTACAAACTATACTAGACAATCCGCAAATTATACACAA ATCATAACCTGACAGTATAATGACTTGTGATCCTTGGTTTTACATAATAAAGACCTGACATAGATTCAAACTTTAGTTTC TTTGCCTAGAGTTGCTGATCACAAATCAATTTGAATAACGGATAGAATTAGGATTATCTTGCAAGGTGTGCTACATACTC AATATTGTTCGGCCAACTGTAATGCACAGTACCCTTTTGAACAAGGCTGTTGTTAGAACAAGGAGAACACTGCTGCTGAT TCCTCACAACAAAAAGAAGTTTTCTTACACAGAAGTTTCAGCCTCATAGCTAACTAAATTCATAACAACAATATAAATAG AGAAATGGTAGTCATTCTGAGAGTGAGAGGTTGGGCCAGGTGCTTTCATTTCAAGAACATCATCATAGATTACATAGTAG AGTCAGGAAGGAATGTCACACAAGTTCAGCAAACGCTATCCATATTAGAGTCAGGTGCATTAAGCCAGCTCTACATACTC TAATCCACACCAGAATCCAAAAACACCCTTAGTCATAGCTTCACCCTGATTTAGGGCAGCTTTGAAGAGCTTATTTTAGC TTATCTTGTAGCATAAGCATTTATAAACTTATTTTCACTTAGCTACGCATACACCCTTATACTTATCTATAACATATTCC GAGTTTATTGCAACAAACTTCTCAAATTAGCTACTAATAATCTCCAAATTTATTATGGGAATGGAGCAAGACACAATCCT ATGATTTTCCTTATTCTAGCTCAGACAGAAGAGTTGAAAAAACAAAAGCCATAATGAAAATGAGCTCACCTGAACAAGAT AGTAAAAGATACGAAGCCCTTCAGGATCAGCACTGCTCTGAACATCCACAAGAGAGCCAATCTTGGAGGTGGTGAAGGAG ATGTGCTCATTCCCCATCACAATCTCAAGCTCCTGCCGCCCGACCCGGTCAGGTTCGGGCCAGTTGTTATCATCTTCCTT CATGATCTGAAACAAACACAATGAGAATGAGAACAGGATGGATATACGACGTCGTCGGAGTTAGGGTTTGGCGGTGAGCT CACCTCGCTCTCGGCTATGATACGGCGGCACTCGCGGAGGACGGCGGGGGTTAGGTAAACCTCCTTGCGGATGATGGTGT CGTTTTTGTAGTTGGAGTTGTTGGCGTAACGGAGCTTGCCGTCGGGTCTGAACTCGAACTCCAAGAATTCGTGGCCGAAC TTGCCCTTGTGTCCGACGTAGTATCTCAGGTAGAATTCATTGTTCTCCTCTTCGGTCGCCATGAATGATGCTTGATTTTC ACTGCTACAACCAGCAACAACGATTCTGTGAAGAAGGAGTGATATTAACTACATGGAGAACGATGATTGGGCCGGGTTAC ACAATGACCCAACCCCGGTTTTTTGGGTTTGTTGCCAATGACCCAGTATCCAGACCTAGTCGACTAGTCCGAGTTTTAAA ACACGGCTTGTGGGATTGACGGGGGAGGGTTATATTTCACTTCAAGCGAAAATGAAGCTCATGGATACGCTTTGGAATAA AAGAGAATTCTAAATTAGATTTGTTTATAA 

CDS sequence (LotjaGi3g1v0551600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGAAACAATCATGTGCGTTTGAACTGTGGCATTACAATGCCTCTCATTGGATTTGGCACTTACTCCTTCCCAAATGA TAAGAGGACAACAGAACATGCCATCCACAATGCACTTCAGATGGGTTATAGGCATTTTGATACAGCAAAAATATATGGTT CTGAGCCAGCAGTGGGGAAAGCCTTAAATGAGACAATCTACATGGGAGAAATAGAAAGGGAAGACATTTTCGTGACATCA AAACTGTGGGGGAGTGATCACCATGATCCTGTTTCTGCATTGAAACGAACTCTAGAGAATCTGGGCATGGAATATCTTGA CATGTATCTAGTGCACTGGCCTGTCAAGTTGAAGCCATGGGTTAACTACCCTGTGCCTAATGAAGATGACTTTGAAAGTT TGGACCTTGAGACCACATGGGCAGGGATGGAGAAGTGCCTAGAAATGGGGTTGTGTAGGTGCATTGGGGTTAGCAATTTC TCTAGCAAGAAAATTGAGTGGCTATTAGATTTTGCTTCTACACCTCCAGCTGTTAACCAGGTTGAAATGCATCCAATGTG GAGGCAAGGAAAGCTCAGAGAGACATGTGGAGACCACAAGATCCATGTAAGTGCTTACTCACCACTTGGTGGACCAGGGA ATGCTTGGGGATCTACAGCAGTGGTTGATCATCCAACCATCAAATCAATTGCCCACAAACACAAAGCAACTCCAGCACAG GTTGCATTGAATTGGGGACTATCAATGGGCTCAAGTGTAATTGTGAAAAGCTTCAGTCAAGAAAGAATGAAGGAGAATAT AGGAGCATTTGATCTGAAATTGGATGATGAAGATATCTGGGAGATCGAGGAATTGGAGGAATTGAAGATCATGAGAGGGG AATTTCATGTTAATGAAACCACAAGTCCCTACAGAACAATTGAAGAGCTTTGGGATGATGAAATTTGA 

Protein sequence (LotjaGi3g1v0551600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MRNNHVRLNCGITMPLIGFGTYSFPNDKRTTEHAIHNALQMGYRHFDTAKIYGSEPAVGKALNETIYMGEIEREDIFVTS KLWGSDHHDPVSALKRTLENLGMEYLDMYLVHWPVKLKPWVNYPVPNEDDFESLDLETTWAGMEKCLEMGLCRCIGVSNF SSKKIEWLLDFASTPPAVNQVEMHPMWRQGKLRETCGDHKIHVSAYSPLGGPGNAWGSTAVVDHPTIKSIAHKHKATPAQ VALNWGLSMGSSVIVKSFSQERMKENIGAFDLKLDDEDIWEIEELEELKIMRGEFHVNETTSPYRTIEELWDDEI 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF 1 309 309 4.5E-92
PANTHER 3 313 311 1.2E-170
Gene3D 3 315 313 1.5E-113
PANTHER 3 313 311 1.2E-170
CDD 5 276 272 4.21693E-86
SUPERFAMILY 6 285 280 4.32E-86
Pfam 17 286 270 8.8E-50
PRINTS 38 62 25 1.4E-49
ProSitePatterns 42 59 18 -
PRINTS 96 114 19 1.4E-49
PRINTS 143 160 18 1.4E-49
ProSitePatterns 143 160 18 -
PRINTS 177 206 30 1.4E-49
PRINTS 221 245 25 1.4E-49
ProSitePatterns 254 269 16 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0551600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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