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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0012500 |
| Transcript ID | LotjaGi4g1v0012500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Orotidine 5'-phosphate decarboxylase; TAIR: AT1G62250.1 orotidine 5'-phosphate decarboxylase; Swiss-Prot: sp|A8QB25|PMIP_MALGO Mitochondrial intermediate peptidase; TrEMBL-Plants: tr|I1MR44|I1MR44_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0012500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:1533404..1540002) extracted from Lotus japonicus Gifu genome v1.2.
GGCAGAGGCAGGGATCCAGAAATAATGAGATATATTTATGATATTTGAGAGGTGAAAGTGATTCTTGGTACCCACAATAC AAACCATTCATATAACTCGTGGCTCCGCTGATTCCCCGTTTGATTCACTCATTCTTCTTCTCTACTACTAAATCTATTTC TCTCTAAACCCAACTTCTCATTTTGCTGCTTCATCAACTACCCCCAAACAAACAGGTATCACTCTAGCTTCTCAACCCCC CAGTTTTTTTTATATTTAATTTCCGTTTCTTCCATTAATTTTTTTCTTTCTTAACATATTTTTATACATTCATTGGTTAT CTTGAAGGGAACAATATCATATGATGGTCCAAACATGCTAATGGTGTATGCTCCCAGAGCTACTCTAAAGTCCCATTTAT ATCAAGATCATCATTACTCACCCTCCCTGCAACAAACATATCCATACAAGATCAATCATCTTAATTTCTTAAATTGCAAT CCTTCTTCTTTCCATAAACCTTTTGCAAGTCCATGTAGCAATATATTTCATAGTTCTTCTGGGAATTGTGATCTATTCCA TCATGTTGCTACACATAAATGGCTGGTAAGTAAGCATCCACCTTATACCTCTTTGGAAAAGCTAATTTGAGTTTATCTTA TAGCACAAAAGCTTATGTAAGTATGGTTAAGCTAATCAAAGTATCTTATGACTTACCTATAAGTTGTTTTAAGCATATTT TCATAAACTGCTCAAATTAGCTTATGAATAAGCATTTGTACCTACCTAAAAATGTTTTTGAGCTTATTTCAATAAGCTTT TCAAATTAGCTTATGAATAAGTGCATAAGCGCGACTATGGCTGCCTTAAGCACTTAGGTAAGCTGTTTGGTCTATCATTC TTTTCTTGCTGATTGATGTGTTATTGACATCATATCATATGAATTGCAGCAGTGTGGGTTACATGATTCTGTTTCGTCTG AAGATGAGTACCGTTCTTCACGCAACATAGCCATCAGCTTGTATAGGCGATACAGGAATTTCATTGATCGCGGTGGAGGT GACAATCTAAAGGTATATACATCCAGTGGCTTACTACTTTGTAACTGACATTCTTCCTTAATAGATCAACTTTCTTGATC GGTTCTCTCTGTAACCAATTTGTGCGTGTTTTCATTCTCAGGAGTTCATCAGTGCTGGGGTAAATGCTTATGCACTTGGG TGCACTGATGAAGGATTAAGGAGGGAACTTATTGACATCAAGGATTCTGGTATTGAAATTGAAGCGATGCAGAGTTATGG TGGGAGCACGAGTTTAAAGTCCAAGATCATCTCAGAGGAGGTCAGTTGTAAATTGATCCAAGTCTTAACCATTTGGTACA ACTGATTCTAATTCATGGATCATGATCATCACAAGAATTTCTTTGGAGTATTTTAGCTTTAAGAAAATTGTAGAAGCTTA TTCATTGTCTATGCAAAAAGGGTAATTTTACTGATGTTCTCTGTTGGGTCCACTAAATTCACAAAGATATGTTTGGTTCT GTATCTTAGAGTTTAATGGATATGCACTGACAGTGTAAAATAGTTTTACACAGACATCCAATTGAATTCCGCCAAATCAG AAAATATCTTATTCTTTTAATTAAAATTAAAGTCAAATGTAATTATCTCTCCTATGTGGCATGCTTTGATTGGATGACTG TGTAAAACTATTTTACACTGTCAGTGCATATCCATTAAACTCTATTTTTTTTTGGTCAATAATTTGGTTCTGTATCTAAA GATTCCCATCTCAGCCTTTCAAAGCCAAGCCTTTTTGGTTTATCTCTCCTGCATTTCAATAATGAGCATTGAGCACTGTA GAAGCTAACAGGCCACATGGACTCACCAACATCAATTGTTGAGCATGATTTCTTCTAAATCTCAATTGTGTTATTCTGCA TGTTCTGGTCATGCAGGTTGATGAGTGCATTCTCTGGTTAAGCATTATATTCATCACCATCTTGTGCACACCCCAACCAA CTATTGTTAGATGGTCATCTACACCTCCTGTTTCAGATGAAGTGAGACTTCAGTGGAAAGGATTTTGTGCCCTTATAGCA AATGCATATTTTATGAAGGGAATGGCTTGGTAAGATGCTACACTTTTCTTTCCTTTTTTTCATGATTCTACTTGTATGAA CTTTTTTTTAGCTGTCAATTAAGTTTGACTCCTCAATGCAATTTAGAGTATAAAGATTGAAGTAATAGCTGCTAAGTTGT AATAAAGTGAACATCTATAACAAACTACAAAATTATTTAAATTAAGAGAAGGGATCAAGTAACTCCGTTTGCATTGCTTA CCATGTGTTTATTGAAGGCTTCCTGTAAAAACTCTTCAACTAGAGCAAACGGCTGTGATGGGTCAAGCTGAGCAACCGTC AGTTGTTGCTAGTCGAATGCGATTGATATTTAGCACTCTTGAGGTTAGCAATTTACATTTTCTGAACAGTATCTGGAGAA ATTATTGAATTGGGGACTATGATCTCATTTTGCCCAAGGGAACAATCTATTGGACATTCAGTAATGGACATAGTATTGAC TATTCATTAAGATAGCTATAAAACTAAAATATTGTAAATTGGCTGTTGCAGGTTGTGAGTCCACAGTGGCCAAGAGCATA GAGCATGAGATTATTGAACCAACAATTTCACGTTGAGTCTAGCAACATCGTGCCAGATAAAAGATTAAAAGGAAAGAAAA GCAAAAAATTGAATAGCCATGTACACTTTATAATTTGAAAGTGTTGTTGATAAAGGACTTCTGATTTGTACATTTTATTA AGCGTTACGTTATACATGTAATACCTTCATGTCCTTGCCTCATGTATGACACAAAATTAATCACCAGTTGTTCCAAGCAG ACATGTTTCACTTGTTCATAGTTTCATAACATAATACTATTCGTTCATCTTAATCTTATACGATCCACCTTGCAAACATA CATTTTTCCACCGGGAATTGATGATGACTATTTTAAAAGTAACATCACATGATAAGATTACAAAAATAAATAAATAGGGC CTTGGCTCCATTTGTGTATAAGAGTATATTATATGGTACATTCAACATCTTTCTCATTAGCAATAGTTGACATACAGATA AACGGGTGCAACCTCCAGCTTTATGAAGTGATGGAGGAAGCTCCACTCTCACCTTCTCAAGAAGGAAAAACAAATATCAA AACTAGACTAGTAAAAGAAAAGTAGTCAAAATTGAACTCAAATAGCCTTGATAAATTCCGAAACCATCACAAATCTGAGG CACCAATAAATTCACTAGCATCTTTGAGTATTTTTGTTGCACGCCAATAGACAGCAGTAGCCTTTTCTGACGTTCCCATC TGCATAATCAACCCCAAAACATATTGTGATCCATGATCATTTGATTAAAATGATTAACTATCCGATAAGCAAAATTTAAA AAGAAGGTTTACCTTAGTCTCCATGCGATAGTACTCTTGCCACAAGCTGACATTTTGTTCATAAGTTGCAAGTGCAGATT CATATAACTTCCTGGCATTTATGAGACCATTTTTATCTCCAATTGATGCAAGGTTTGTTTCCAGGTCAATGCATTTTCTG TATAATGCTAGGCCGGGATGTGGTAAAGCAAGAAATCTGCAATGAGAATCAATTGAGGAATTATTGTACATACAAGATAG AAAAATAGGTAAACACCCGCTGCGCGATTTCCAGGGAACATACCGTTTATAGATATATCTGGCCTGCTGAATTCCATCTT TCTGAAGTATAAAATTGATGATGGCAGAAGAAAGAGAGAATCCATTTTCACTGCCAGAACCTCCAGCCAAAGAAGCAACA GAAATCTCCACAAGTTTATCAAAATACTGTCTTTGATTTGCATAGAATTTAAGGGCCTGTATTGAGTGACAGTCAGAAAT GAACAGGTTTAATCGTGTGGATTTAGTACTATAAAAACCAGTTCAAGTGAAGGAAAAAGCAATTCAAGCTGAATTGAATA AAGATAAAATGTATGAGAATTTAAAAACACAGAAAATTAGGGATAGATAGAGAACTATTCAGCATTAAGAAGATGCATTC ATCTCCAAAATATAATTTAAATGAAAACAGAGGAAAAAAATTATTCTTACTGAAAAATCATAGTAGGAACAAATCCCAGC TTTGGTTTCAAATGGAAAATACTTCTTTACGAGAACCAAAATCCAACATTAAAAAATGGCATTTAGAGAACAATTTTTGG TGGCAGAATGATTCATTAATTAACAAATGTCCAACAAACATTTAATCTTTCTACAGGAAAAGCAAATGGATACTGTTTTG GAATAAGTCAGGTAACTCAAACTAGGAGATTATTCAAAAATCAAATGATCAGGGAATAAACAATTAAAAAATATTATATA AACTAAACCCGGGAGGCAACAGAAATTTGAGTCAAAATTGATTAGATTGAATTAAATTTTATACGAGGCATGGCTCAATA TAGAAAACAAAAATAAGAAATTGAGGATGACAACAAACCTGTAGCCACAAGTCCTCTGACTCTGAAACAGGAACTTTGGT CAAAATTTGTCTAAGGAGTTCAAAAAGGGATAGCAAATCAGCATCACTAGGTGAAGAACTTCTTGTGATGCATCTAATTT CTATAGTAACCCTTAATCCCCACAACTGTACAGACTTTGCATGTTTTCCATTGCAAAGCCGCTCTGCCAGTTTCCTAGCC TCATCCAATTGTCCTATTTGCAAATGTAAGGTCACAAAAGTGAAAGCAAGATCCTCGGTAATGCACCCCATGCTTTCAGC TCTTTCACATAATGACAAGAGATGTGATATATAGTTTACACCATGACTTGATGACTCAGTTATATTGGTTTCCCCTTCTT TAGGAGCTATAATTTCCATTAGAAAATTTGCATACAAACCAAACATAGTTCCTGAAGGGACACTTAACAAAGCCTCCTCA TAAACCTACAAAACAGAGAAGGACCCCCAAGGTTTCATTTTCATTTGATCAATATAGGCATACAATACAAGAAAACAAAC CATAGCAAGATTTCTCTGGTACTAGTATTATTCTTAGACAAGGGTAGCATAACCCTGATGATTATAATATGCTTACATTT CCTAATTTGGGTTGAGGTTAAAGCATTCATAAATTTCAGCCACGAGAAAACATTTATCCAAATAACAGTTCTCACATATT CATACCTGAATTGCCTTTTGCACCTGAGGAATTAAGTTTTCTTCACTAATCTCCTGCACATTTTCGAGATCACAGTTATG TCTCGCAAGCCAGTCCCAGAACTCAGGTTCTGTGGAAAAATCCCTCTTCATGCCATTCAGTATCTCCTCGCACATGTCTT CGTAATGTGACAAGTTGGTCCCCTCCAATATTTCAAAGAACCGCTTCCTAAGACTGAGACTTGAAGGCATAGCTTCAACT GATCCAGCATAGACAGTTCGAAAAATGTTCATACCATGCTCCTCAAATAATTCAATATTCTTATTTGATTCATCACTTTC AACAACCGGTCCATCATTCTTCTCCTTATCTTCAAGGGACATGAACAACTCTTTGTTTTCATCCCTCCATTGTTCTTCAT CAGCCCTTCTAGGATCACGGGCCAGAGTTCCATCATCCTCACCTAAAGCAACCTTCCGCGCCTTCAACTTGTTAATGTAC GTAAGTTCCATCCGAAGATACTCCACCCAAAGGTCTTCCGAAGTGGGGCAAACTCTAAGACCTTCCTGCATTAACGCACG AGCAGCCGCAACATTCAAGTTATTATCAAATTCCCAAGCTGCAGCATAAATCCAAACCCCAGGAACCTTAGGGTGAAACC TAATAACTTTTGCCAATGCCTGCAACAAGAAAAGAAAATTTCCACAGCCATTAATCCAACAATAATCATAACAGTGTCAT CATCTTTACACAAACAACTATCACAAATCAACTAGCAATTCTCTACAAAAACACATTATCCATTTAGCTATGAAATTCTA ACTATGTTGCATATTTTCTGGAAAATGATAATCAAGAGAGTGAGTAAGAAAAGGGTTACATGCCTTCTTCATTCTGCCAT TTTTCTTCTGTCTGCAGAACTCAAGGTAACGAAACCAGAGATCAATATCACCCTTGTAACGCTTCAAAGCGAGTTCATAA ATCCCCGTGATCCTACGCAAGCCAGCAAAATCGGATTTCGATTTCTTCAGGTTCTTATTGCCTTGCTTCTTCAACTCACG CGCCGCCGCTTTCTTGCGGAGCCGGAGGAGGGCGTCGAGGTGAGACTCGTACTCGACGTAGGCCAAGTAGTCTTGCTTCA GAGGACACGGACGCTTCAGTCTGTACTCGAATTTACGCCGCTGCTTCACGATCTCCGCTATCTCGGGGTGGCTGAAGAGC TCGCGCTGCTCGAGGTCGTCGAGCTCGGGGAGCATGCGCTCCAGCTTGTATTGCACTACGTCCGCCATGGCTTATGGTTC CGACCACCGTGAACGGAGGCGGTAGTGGAGGAGCGGCAAGGGAACAATGGATTCTAAACGAAGGTGAACCTGTGTCTGTG AGGCTGCGGTGGAGTTTGAGGTTGAAGGAGGGTTTTGAC
CDS sequence (LotjaGi4g1v0012500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTAATGGTGTATGCTCCCAGAGCTACTCTAAAGTCCCATTTATATCAAGATCATCATTACTCACCCTCCCTGCAACA AACATATCCATACAAGATCAATCATCTTAATTTCTTAAATTGCAATCCTTCTTCTTTCCATAAACCTTTTGCAAGTCCAT GTAGCAATATATTTCATAGTTCTTCTGGGAATTGTGATCTATTCCATCATGTTGCTACACATAAATGGCTGCAGTGTGGG TTACATGATTCTGTTTCGTCTGAAGATGAGTACCGTTCTTCACGCAACATAGCCATCAGCTTGTATAGGCGATACAGGAA TTTCATTGATCGCGGTGGAGGTGACAATCTAAAGGAGTTCATCAGTGCTGGGGTAAATGCTTATGCACTTGGGTGCACTG ATGAAGGATTAAGGAGGGAACTTATTGACATCAAGGATTCTGGTATTGAAATTGAAGCGATGCAGAGTTATGGTGGGAGC ACGAGTTTAAAGTCCAAGATCATCTCAGAGGAGGTTGATGAGTGCATTCTCTGGTTAAGCATTATATTCATCACCATCTT GTGCACACCCCAACCAACTATTGTTAGATGGTCATCTACACCTCCTGTTTCAGATGAAGTGAGACTTCAGTGGAAAGGAT TTTGTGCCCTTATAGCAAATGCATATTTTATGAAGGGAATGGCTTGGCTTCCTGTAAAAACTCTTCAACTAGAGCAAACG GCTGTGATGGGTCAAGCTGAGCAACCGTCAGTTGTTGCTAGTCGAATGCGATTGATATTTAGCACTCTTGAGGTTGTGAG TCCACAGTGGCCAAGAGCATAG
Protein sequence (LotjaGi4g1v0012500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLMVYAPRATLKSHLYQDHHYSPSLQQTYPYKINHLNFLNCNPSSFHKPFASPCSNIFHSSSGNCDLFHHVATHKWLQCG LHDSVSSEDEYRSSRNIAISLYRRYRNFIDRGGGDNLKEFISAGVNAYALGCTDEGLRRELIDIKDSGIEIEAMQSYGGS TSLKSKIISEEVDECILWLSIIFITILCTPQPTIVRWSSTPPVSDEVRLQWKGFCALIANAYFMKGMAWLPVKTLQLEQT AVMGQAEQPSVVASRMRLIFSTLEVVSPQWPRA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 272 | 272 | 2.0E-134 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0012500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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