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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0014100 |
| Transcript ID | LotjaGi4g1v0014100.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hexosyltransferase; TAIR: AT1G05170.2 Galactosyltransferase family protein; Swiss-Prot: sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2; TrEMBL-Plants: tr|A0A0L9TTQ4|A0A0L9TTQ4_PHAAN Hexosyltransferase; Found in the gene: LotjaGi4g1v0014100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:1802666..1805042) extracted from Lotus japonicus Gifu genome v1.2.
GCTCCTGAATTTATGCTGAATGGTTCTCCTGTATCAGGAATCTCACAGAAAGTTCAATCTTCTCCAAGAAAAAAATGTTT CATGGTTATAGGTATCAATACAGCATTTAGTAGCCGGAAGCGAAGAGATTCTATTCGTGAAACTTGGATGCCAGGAGGTG ATATAGTTTTTCCTCTCTTAAAAGTTTTCTTGTAACTTTTTAATACAAATCCATATACCGCGTGTTTCTGATCCCTGGTT TCTAATGGAACTTTATCAGCCGAGGAAAGAAAGAAATTGGAGGAAGAAAAGGGCATAATCATACGTTTTGTTATTGGTCA CAGGTCAGACTCAATGTTTCCTGATAGTCACTGTATTTATTGGTGTGCTTACTTATTTATGATTTTTCTGTTGCAGTTAA GTCCTCATATGATCTCTCACTAAAACTTTGTTTTGTGGCCTTACCATCAAATTATTCAAACTGAAACTGTTATTCTCTCA TTTTGATGCAAATTGTGTTAATATCTGTCCAACAAGATTGCTTTGTATTGTGTTGATTGGTGGCAATGTGGCATACATAT TATTTCAGATCACTGTTTTCAAAATCAATGATATAAAGTCATGAAACCTTGCCTCTTCTTCTACAGTTCTACATCTGGTG GCATTCTTGACAGAGCTATTGAAGCAGAGGAGAAGCTTCATGCCGACTTCATGAGGCTGGTAATCTTTCTCTCCTATCTT TTTTTCGTTCATGTGTATAATCCGTTATCCTATATTTATTGACGAAACAAAATACATCCATGTTTAAGCAGGACCACGTT GAGGGCTACCTGGAACTATCAGCTAAGACGAAAACCTATTTTTCCACTGCCCTTGCCTTGTGGGATGCAGAATATTATAT CAAAGTTGATGATGATGTTCATGTGAATTTAGGTAAATGGAATAAATTTTTTATGTTTACAATTAATGTTGATATGTAGA GAATTAGAGGAGAAAGTAACTATGATAAATTTGTATGATACTCCCTCCGTCCCATATTATAAGTCACATTTTCTCAAATT TTTTTGTCCCAAAATATAAGTCACTCTCTAATATCTATGAATCATTAATTAATTTTTTCCATGTTTACCCTCATATGTAT TATGAAAGAGATAGAAGAGATAGTGTGATTTTAATCTTTTTTTAACTTTGAGAGAAAAATTCATGGGTAATCTTGGAAAG TTAATAATTTTTTTACACATTTATTGCTAGTAACTACTTTTCTTAATCTTAGAGGATTAGGTAAATGTGACTTATAAATT GGGACGGAGAGAGTAAATCTTTGTAAGCTTGTTTAGATTGTCAAATGACTGAGTCACAAAGTTATTTTGCAAAGCAATCA TTATTTTTGCTCAATAAACATCCATCACTTTCCTCAATGAGCTATTTTTTTTTTCATCTCAGCCACACTTGGATCCATTC TGACTATGCACCGCCAGAAACCTCGAGTATATATCGGGTGCATGAAATCCGGCCCCGTCCTTGCTCAGAAGTAAGGAAAG ATTTATTTTATTTTTTTCATTTAGTTTGAATCTACTTCCAATTTTAACTCTCTTACCACAGGGGAGTGAAATATCATGAA CCAGAATACTGGAAATTTGGCGAGGTGGGAAATAAGTACTTCCGTCACGCTACAGGACAACTATATGCCATTTCACAAGA TTTGGCTACTTATATATCCATAAATCGGTAAGTTTTGTTTTCGCTACTTAGAGCAATTTAAGCACAGATGTTTGGATGTT AGTGAAATTGAGATTTTCATTATGTAGCAAGAAGTACAGACTAACATTTTTGGGGACTTTGTGTGGCTTTCTTTACTTGT TTATAATTTAATACGATGTTAAGTATAGTTTGATTTTATATTGCCAGGGACGTGTTGCATAAATATGCTAATGAAGATGT TTCACTGGGTGCTTGGTTAATTGGTTTAGATGTGGAACATATTGATGATAGGAGAATGTGTTGTGGTACATCCCCTGGTA TGTTATTTCGAATTTCATCATAGTCTATTAAAAAAGTAAAATCATGTGACAACGACATAATCATCATTGTTCCAATACTT GTGCAGAAGCATTATACATAGAATTGGATGTGTATGTAAAACTTTCTAGGTTCTTAGAACGTATAAATTAATTTGTTGAA ATTATAACTAAATATTAATTAACCTCCTTTGAAGCTTATTTGATACTAGTAGTGCTACCCTTGTGCAGATTGCGAGTGGA AGGCTCAGGCAGGTAATATCTGTGCTGCTTCATTTGATTGGAGATGCAGCGGAATTTGCAGGTCTGTTGAGAGGATGAAG GAGGTTCACCAGCGTTGCGGGGAGGATGAAAATGCACTGGGGGCTGCAACTTTCTGA
CDS sequence (LotjaGi4g1v0014100.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGAATGGTTCTCCTGTATCAGGAATCTCACAGAAAGTTCAATCTTCTCCAAGAAAAAAATGTTTCATGGTTATAGG TATCAATACAGCATTTAGTAGCCGGAAGCGAAGAGATTCTATTCGTGAAACTTGGATGCCAGGAGCCGAGGAAAGAAAGA AATTGGAGGAAGAAAAGGGCATAATCATACGTTTTGTTATTGGTCACAGTTCTACATCTGGTGGCATTCTTGACAGAGCT ATTGAAGCAGAGGAGAAGCTTCATGCCGACTTCATGAGGCTGGACCACGTTGAGGGCTACCTGGAACTATCAGCTAAGAC GAAAACCTATTTTTCCACTGCCCTTGCCTTGTGGGATGCAGAATATTATATCAAAGTTGATGATGATGTTCATGTGAATT TAGCCACACTTGGATCCATTCTGACTATGCACCGCCAGAAACCTCGAGTATATATCGGGTGCATGAAATCCGGCCCCGTC CTTGCTCAGAAGGGAGTGAAATATCATGAACCAGAATACTGGAAATTTGGCGAGGTGGGAAATAAGTACTTCCGTCACGC TACAGGACAACTATATGCCATTTCACAAGATTTGGCTACTTATATATCCATAAATCGGGACGTGTTGCATAAATATGCTA ATGAAGATGTTTCACTGGGTGCTTGGTTAATTGGTTTAGATGTGGAACATATTGATGATAGGAGAATGTGTTGTGGTACA TCCCCTGATTGCGAGTGGAAGGCTCAGGCAGGTAATATCTGTGCTGCTTCATTTGATTGGAGATGCAGCGGAATTTGCAG GTCTGTTGAGAGGATGAAGGAGGTTCACCAGCGTTGCGGGGAGGATGAAAATGCACTGGGGGCTGCAACTTTCTGA
Protein sequence (LotjaGi4g1v0014100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLNGSPVSGISQKVQSSPRKKCFMVIGINTAFSSRKRRDSIRETWMPGAEERKKLEEEKGIIIRFVIGHSSTSGGILDRA IEAEEKLHADFMRLDHVEGYLELSAKTKTYFSTALALWDAEYYIKVDDDVHVNLATLGSILTMHRQKPRVYIGCMKSGPV LAQKGVKYHEPEYWKFGEVGNKYFRHATGQLYAISQDLATYISINRDVLHKYANEDVSLGAWLIGLDVEHIDDRRMCCGT SPDCEWKAQAGNICAASFDWRCSGICRSVERMKEVHQRCGEDENALGAATF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 282 | 280 | 4.2E-169 | – | |
| PANTHER | 3 | 282 | 280 | 4.2E-169 | ||
| Gene3D | 15 | 224 | 210 | 4.9E-7 | – | |
| Pfam | 36 | 233 | 198 | 1.3E-49 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi4g1v0014100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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