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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0019100 |
| Transcript ID | LotjaGi4g1v0019100.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor; TAIR: AT2G31220.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q84TK1|BH010_ARATH Transcription factor bHLH10; TrEMBL-Plants: tr|C0JP25|C0JP25_LOTJA Putative basic helix-loop-helix protein BHLH14; Found in the gene: LotjaGi4g1v0019100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:2399767..2406691) extracted from Lotus japonicus Gifu genome v1.2.
TATTAAAATGCATTTCTCATTATTTAATCTGATTCATTTGCATGCATTGTCAAACAATGAGAATTTTTCATAATGTTGAA AAATATTGTTAAGAAAGTTCAGTAAACAAAAGTGTGATATAAGCAATTAATTAAGCATGGTTGAAAATTGTACACAGTCC GGATTTTTAACTCATATTGTCACTATTGATGTGGACATCTGTTGTAAATTTGTATTCAATCAATACATATCCATGAATTC TTGTAATATAGTCCTTGGCTTATAAACCATTTCATTGCAAGCCAAGTTGAGCAACATATATAAAATGTCATGGCACAAAA TATTGGGTCACATGCATGAGAAAACAAGAGCTTTCTATATTGGTACAGTAGCTTTCTTGCTGGTGTGGAGGATCACAACA AGTGCCGTTAATGGTAGATTTTAGAATCCAAACTAATGCGTTTTCTTCTGCAATCACGTTTTGTGTGAACCATACATAAT ATTGTTTTCTTTTATTTTTTTAACACTTTCTTGCACCTCGTCCTATGTCTTAAATTAGTCTCAATTTCCCTTTTTAAGAT ATGATATCAAGGAAATTATTAAAAAAAACTCATCATCAAAATTGTTACTATTTTCTTATACTTTACTTGTTTGAAAAAAA AAAATAGGTAGAGTATTTTTTATCATCTAAAAACAATGCAAAAACTATATTGATTATTTGTGCAAATATAGTCACTAGAT TGTATTGTATAATGAGTTTTATAAAGTATTATTTTTTAAGCTATAAGTATAATAAATATAAAAGTTATTCATATTGATAA CCTTGATAAAAATATTTTAAAAAATCAATATCAACAAGGATTATGGTTACATCACCCACGAAACTACACAATTGTTCACC ATAAACTGTTTCACTTTTTCTTTACATAAATCTTCGACAATCACATAATTCGTGCTTCAAAAACTACATTTCGAACATCT AGATTAATTTTGGAAGATGTTGTTATAGTTAACCAACAACTAGTAAATCAAGGCTTTGGATTTCAAGCTATATAGTCGAA TGCTGAGGAACCTAGGGGGCCTCATAGATCCACCAAATATGAATTTTGATGCTTTCAGAAAACACTTTGGAGTTCAGCTC CGACCAATAGAAAGACCTATCTACCAGAAGCTATATCATGAATGGATGAGAAAGAATGAGATCAAACACGAAGCAATAGG TGAGAAAGGATGAGATAAAAAATGGAGCTAGTTCCCAACGTATGCTATCAACATGGTTTTTTATAGGATAACCATCACCT GCAAAGCAATGGGTGAGAAAGGATGAGATCAAACATGAAGTAAATGAGTACTTCAAAGAAAGGAATAAAAGAACTAAAAC AATGTTATAGTAACAGATCAACTCAGAAGCAGAGTTTGCAATTGCCAATCAACTCTTTCTAAAACACTTCCAATCTATTA ACACACCACGTTCCATCCTTTCATAGTGTCCCACCCCCTGTGATCCCAAACCCGCATCTATGCAGATAAGCCCCTCTAGT CTACAACCCTCTTACTGCCACCAAATTCTAAGTCACTAATTCAGCTGGTTTTGAGGCATACCACCGGGTTGCTGCACCAT TCATAAACTGAGTAATGAAAACCCTGCGATTTTGCGGACAACCAGCACCACGATCTGACCTGAATTAGCTCGAAGGTCCT GAAAATTTCAGCTGGCTCACCCCTGAAAATCAAATTATTCCTCGCATTCCAATTGGCCACACAACAGCAAGGCACACCGC CCTCCAACTGATGGAGTGTATTGCTCATATTATTGTGATTATTTCGGAAAAATTCCCATGAGCTTGAGCATGTGGGCCAC TGGAAGAGGAAATATGGCTGAATTGCTTGTAACTGAACGACCCCATTTTCTTCCAATTCCTATGCCTAAAAGATTAAGCT ATGCTTTCTGAGATATTTGCCTTTTTTAGTACCCAACGTTCGTAACTCCCTCCACGGCTCTACCTTTTCTTTCTTTCTTT CTCACCACAAACTGTCTCTTAGAGTTTGTTGGACTCACACACCAAGAAGAGGGAATTCCAAATCCCTCTGTCTCAAAATT TCCATCATAAACTGTTGGAGTTTCTTTTCCTTATAGTATAGGTAATTCACAACTACAATGACAATTACTTTCTTCCTTAT TTAAGGTCCTCAAATTTCTAACTGTGTGCTAGAACCACCTTCAACAAACAAGATTCAAATGATCAAACCTCAAATATTAT TCTGAATGTTCAAAAAGCATGCCTGCTTCTCCTGGTTGATTTGTGGTGTTTAACTAATTATTCTGTCTTTTCTTGATTTC TATTTTTTCTGGTGGGTATTTTCTGTTGTGATATTTTTCTATGCACACATATAGTGTGTCAGTTTCTTTAATTTTGAATT CCTGATTCTGTTATTTTGTGCCAACTATTGCAGGTAAAGAATAACGAGTGCAGGAGACAAGCAAAAAATGCATGAGCAAA CTGGTTGCTTTGATCCCAACACAATGGCAGAAGGTGTAAGCTCTCAAAAAGATAGCTTTCCTCAAACTCTTCTTGACCCA CAACCACAATCACTTATGGTTACAGAGAACACCACAAACAGCAACAACATCATGGATAACCATTTGGTGCAAGAGGTCAT TGATGCCCCTCTCTATCAGCAATCCACTTGGGACCCTAATGTTCAAGAAGTACAAGATATGAGCTATGCTAACCATCCAG AACAACAATTTCAGCATATTGATGCACAAAACTACTGCCAAAGCTACACTCCTTCCATACTAGACCCTTCTTACCCTTCA CCAGATCTCCTAAACTTTCTCCACTTGCCCACATGCTCAGCTTCATCTTTACTCACCAATCCACCCAACATTTGCATCTC AAACCCAACTCAGAGGACACCCAATTTCCAGAACTCAATGACCTTTCTAGGAGACCTTCCAATGGGACCAGACAACACAA GTGCATCCTCAGTTCTGTATGATCCTCTATTTCATTTGAACCTGCCTCCACAGCCTCCAGCCCTCAGAGAGCTGTTCCAA TCTCTCCCCCGTGGCTACAGGTTGCCAACCAGCTCCAGGGACGATTCGCTTTTCGGTGGAGGGGATGAGATGGAGGGAGA TGGGAGCCAGCTTGACATGGGAGTGCTGGATTTCAATAGGGGCACAGCTTCTGTTGGCAAAGGAAGGGAAGGAAAAGGTG CCAAACCTTTTGCAACTGAGAAAGACAGAAGAGAGCAATTGAATGGAAAATACAAAATCTTGAGGAGTCTTATCCCTAAC CCCACCAAGGTACACAGAATCTATGCATTATCTAAATAATCTGTTTCATGTTTTTCTATGAATCAAAGCTAATAGGTTGG GTTCTGTTTAAGCCTGATAGAGCCTCTGTTGTTGGTGATGCCATTGAGTATATAAGAGAGCTGATTAGAACAGTCAATGA GCTCAAACTATTGGTGGAGAAGAAAAGACATGAGAGGGAGAGGTGCAAGAGGCCAAAAAACGAAGAGGATGCTGAGGAAA GCTGTAACATTAAGCCTTTTGGGGATCCAGATGGATACATAAGGACCTCATGGCTCCAGAGGAAATCCAAAGACAGTGAG GTTGATGTCCGAATCATCGATGATGATGTCACAATCAAATTCTTCCAGAGGAAGAAGATTAACTGCCTGCTATTTGTGTC AAAGGTTCTGGATGAACTTCAGTTGGAACTTCACCATCTTGCAGGTGGACATGTTGGTGAATATTGGAGTTTCTTGTTCA ATAGCAAGGTTGGTGTTTTTCTAGACCCAATACCCATAGAGTGATTAAAAGCTTTTTGAATAGAATTATCATATTGTCAT AATTGCATATTCAACAGCGACCTGTTTCACTGACGCAGGTAATTGAAGGTTCATCAGTCTATGCAAGTGCCATAGCCAAC AGGGTGATTGATGTTTTGGACAGTCAATACGCTGCAGCAGTTCCACAGACAAGTAGCTATTAGAGCCGTGGAAGATAGTG TCAATATCAGGAACAAAAGACATGCATGAAACTATAACATATACTGGTAGTAATAATAATAGTAGTAACAAGTTCCTGAG GACACTCAGGTGATAGTGAGATTATAAAGTTTAACAGTTTCTGACTTTCTGGTTCAAAATATAGTTTCTTCAAGTAGTAC CAAGTCCTTTTTGGGATTATGCCATCTACCATTTGTCCTCTTTTCTTTCTTTTTACATACATTTTCCATTGCTATTTTAG TTTGGTTTAGCAGGCATTATGCCAGAACAAGGACATGAAGGCATTATTTTTCTCCTCTAGTTTGGGTCATACTTTGCTGT TTCGATTTCCATGAGCAGTTTGTCATTAATATGAAATCTCAAAGCAGCAAAAATACAACTTATATGGAAATCATTATTAA GAACAAAGTAGTTTTAACTTTTAACTAGTTGTCACTTCTATTCTAATTTCTAATTTGGGCAGGGCAGCAGTTCCAAAAAA CTGCTTCTCTTGGACAACATAGAATTAAATTATTTGAAGCATCATCATCTTAGAATGAAGCTATTATCATAATTTTTGTG TTGTTAACCAAACCAATGCAAAAACATTTCTGATGTAGGCCACTGGCAGCAAAAAAGATACTGGAACAGCTATTATGCTT AAACCAAAAAAGACATACAATATAAATAATTTAAAAAAGAAAACTTGAAGGAACAAATGGGTGGCCTGCTATCTTCTCAT TATTATACCCAGGCATACTTTATCATCCACCAAGTACTGCTAAATTTAACTACAAGATGTATTGGCAAATCAAACACCTT ACCTACACTTGGTGTTGGCAAGTATCTCCTGTCACAAGAGAAGAATGATAAGGTTCCAGCCAATCCAGTTACTAATATCT TGCGGTTTGTTGGTGAGACCTAATCACTTTGACAATGAAAGAAGAGGTTTTAAGGGAGATAGTCTCTTACAAGATAACCA GAAAATGGTTGCAAAATGAGTCTGTAAACTTACCAAGCTGAACATTGAGAAAAAAATATTTAACCCTATGATTGTCAAGA CAGCAAATATCATCTCCACGACTTCCAGGCTTTGCTAACTTTCTTCGCAAGATATCTGGTAGCATTCACCCCACCAGCGG CAAGCAGACCAGATATGGCCTGCCTTGCACTTGAAACCATAACTCTCCGCCTCAGAACTCTCCGCAAGCAATTTGCAGCC TCTTCTCTTGAGCTGATTATAGTATCATGTACGATTCTACCTGAAATCATAACCCTTTTTTCCTCAAAATATGACATGCA TCCCTCGTCAGAGGTGTAATCTCCTGTTATCAAGTACCATCTAAAGATTCAAAAGAGCTAATTAAATTAATCAATTTCAG TTCATTCATAATATGACTCTTTTTATAATTCTCAATCCCCTAGGCTGATTTGACTTCAGGAACATTAACAACCGAAGCAA TAATTCAGAAACAATTCCTTGACATACTATAAATATAAGCATACCAGTTTCACTTAATTTCATCTTCTGTTCTTGCTTCA TGCTCATCTGGCTTCTGACTGATGGAGGAAGGGAAGAAACTAGAGAGCAAGCAACTGACAAGTCACAATCCTGTTTTAAA ACGTAAAAGAAGTTTCTTTACTTGGTATATCAACTCTGAAGATGCAACATTGCATCATATACAACTAGATTCAAAGGAAA CTTTTCTGTTGAGCAGTACAAATACATGACGCAGAGTACCAGAAATTATCCATAAAATGAGCTGGACGGATATTTAGAAG TAATCATTTTCAAGACCAGCAAAAAAGATATAATGTATTCATAATATATAAAACCTTAAAAATGCCACCCACAATTAAAT AGAAACCAAAGGTGGAAACTAGAAAATCCAGAAGGAGATTCAAAGCACAAAATAGCAGGAAAACATTGCTTATATTTTTT ACTTCTTAACAGACACAAAGGATAGGAAAAAATATTGCAAATATTGCATTCTCATTACAACATTAAGGGCTCTAATTCCT CTAAATTACATGTTGGACCAAGATAGAAGGAAGGAATCACAAGTTGATGCATCACACCTCACAGGTTAATCTTCATAGTG CTCATTCAGTTATATAGTAAGATAAAAAGCATATATTTATTAATACTGAAAAATAAACAAACATTAATCTCTCTTCATAA TACAAAACTTTATTTCTGATATCTAAAGACCTGAACGACCCATTTGGTGATTGGCATTTGATGAAAGTATTAAAAAATTA TTATCATTTAGCTTTTGATGTTATAACTTTGAAAGACATAGTTGCAATAACAATTATTGTATTTGAGCCACTAAGAATGC TCAAACCAGTGAAATGTTTAAGGTCTAATAAATAAAGAAATTACAAGTTTGTCTGCAATAGTTCATTGGTTAATACTTCA CTAAAGAGTCTAAAGAGCAACAAAGCTAAATTCCTTGAAATGCGTGATAAGAAATGGGATAATTGGTATTCAGGGCTCAG TTAACATATCTCTAATTTAGGATGAATTAACCAAAAGAATGGCTAATCAGTCGACATTTACTATATATGGGGAAGTTGTT CACCACTTTTGTGATTAATCAGTGTCCAGAAATTATGTTGATAAAATATCCTAAATTCTGATTCTCCTAAAGAAATTAGT AGGAAAAAAAAAACCTGAGAGACTTGTATTGGGCGATTGGCAGTTGATGAAAGTCTCAATAACTTCTTAGCCTCATATTC TTCAAGAAATGGCTTATAGATTGAGTGGAATAGATCAAACTGCCCACTTACAATATTCTTCACCTGGACAGATTGTGGAC AAAGGAAACTCGGTCAAAAACCAAGGCAAATAGGATCCATATATGATTAATATGTCTTCCTTCGCAAAGAACCACAAAAT CAAACAGTTTTCCAACAGAGAAACACCAGTCAGTTAATAATTGGA
CDS sequence (LotjaGi4g1v0019100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTTCTATGAATCAAAGCTAATAGGTTGGGTTCTGTTTAAGCCTGATAGAGCCTCTGTTGTTGGTGATGCCATTGA GTATATAAGAGAGCTGATTAGAACAGTCAATGAGCTCAAACTATTGGTGGAGAAGAAAAGACATGAGAGGGAGAGGTGCA AGAGGCCAAAAAACGAAGAGGATGCTGAGGAAAGCTGTAACATTAAGCCTTTTGGGGATCCAGATGGATACATAAGGACC TCATGGCTCCAGAGGAAATCCAAAGACAGTGAGGTTGATGTCCGAATCATCGATGATGATGTCACAATCAAATTCTTCCA GAGGAAGAAGATTAACTGCCTGCTATTTGTGTCAAAGGTTCTGGATGAACTTCAGTTGGAACTTCACCATCTTGCAGGTG GACATGTTGGTGAATATTGGAGTTTCTTGTTCAATAGCAAGGTAATTGAAGGTTCATCAGTCTATGCAAGTGCCATAGCC AACAGGGTGATTGATGTTTTGGACAGTCAATACGCTGCAGCAGTTCCACAGACAAGTAGCTATTAG
Protein sequence (LotjaGi4g1v0019100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFFYESKLIGWVLFKPDRASVVGDAIEYIRELIRTVNELKLLVEKKRHERERCKRPKNEEDAEESCNIKPFGDPDGYIRT SWLQRKSKDSEVDVRIIDDDVTIKFFQRKKINCLLFVSKVLDELQLELHHLAGGHVGEYWSFLFNSKVIEGSSVYASAIA NRVIDVLDSQYAAAVPQTSSY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 178 | 164 | 3.8E-89 | – | |
| Coils | 29 | 49 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0019100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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