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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0019400 |
| Transcript ID | LotjaGi4g1v0019400.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NAD(P)-binding Rossmann-fold superfamily protein; TAIR: AT2G39080.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|P0AD13|YEEZ_ECO57 Protein YeeZ; TrEMBL-Plants: tr|I1K383|I1K383_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0019400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:2434176..2437338) extracted from Lotus japonicus Gifu genome v1.2.
TCTACAATCTACACAGACACTCTCACCTCCCTCTGCAACATGGCATTTCAATCCAGAAAGTGAGACCAACTCAACTGTGT TGTTATCTTCCATTTCCACCCCACTCAAATCCTCATGACAGGAACCACATGTTTCACAGCTTCAAATGTTGTTCTCAATC CTCAGACTTTCTCAAACCTCTCCAACAACGCTCTGTATCTGGGATTCATCGGTCCTAAGCCTACCCATCTGCAATTCTCT CACTCCAAATTGGAAAGCAGAGTAAAGTTGACATCTTTTCCAATGTCTAAGACAACCCATTTGCGAGTTTCACAAGATGC ATTCACACCCACTGAGGAATCACCATCTTCCCCTCCTCGTGTAATCGGAGAACATGACTTGCTCATTGTGGGTCCCGGTG TTCTTGGTCGTTTGGTTGCTCAGAAATGGCAAGAGGTACTGTTTCATTTTTCTTTCTGTCTCTTAAATGTTGTTCCTTGT ATAAGAACATGTGTGGAATCAATGTTGAGAGTTTTCTAATTTTTTGTTCTTTCTTATAATTTTGTTATGATTTATTGGCA TTGTGATTTTTCAGTGTTGAGTAGCTTCTAATGATATGTATATGCATTTAGGAAATTCCGGGGTGTCAAGTTTATGGACA GACAATGACCACTGATCATCACAATGAATTGATTGAAATGGGTGTTAATCCGTCTTTGAAGTGGACAGAAGCTACTCATA AGTTTCCAAATGTTTTATATTGTGCTCCACCTTCCAAGTCTCCAGACTATGCTGGTAATGTTAGGTGAGAAATCATAGGA GTTAATTCCTTAATTTTGTGTTTGGAAGTAAAAGGCCAAAAGGGTATGGCAACATGGTAGTGAATTGGTTCCAAGACTTG GTTATGGGTGGAGTGTTATAGACTTATAGCTTGTATGGATCAGCTTCTATCTCCTCATAATCAATTCTGACAAGCGGAAG CTACTCACAGAAGCTTCTTCCTGAATTGATTTTGCCTTTAGAATAGTTGTAGAAGGATTTCCCGACATGCACTTAAGCTG GTTATATCTCATAAGTTATTATGTTCAAAAGTCGCATCCAAGGAACAATGTATTATATAGTAATTGGACTCACGGACAAG GGCATCCAATTTCATTTTCCACCATTTGAATGTTCTGCTTTGATTCCTAACATCACTTCATGTTCTTGTAGCAATATTGA AGTTGTTGGTCTGATCAACTTGGATGTTCTTCATTTATACAATTTAGTTAGAGAAAAATCATATTACCTTAGTGAAAGCA AATTTTGCAGTAATGTAGTAGTTGTCTTCTTATCTATTGATGTGGATTTTCAATGAATCAGGCTAGCTGCATTAAGCTGG AATGGTGAAGGTTCTTTCGTTTTCACATCAAGCAGTGCTCCATACGATTGTAATGATAATGGACCATGTGATGAGGTGGG TCATACATCCAAATTCCAAACTGTCATATTCTTTTGCTGTTAAAGGCCAATTTTTCTCTTTTGATTTAAATTGAGGAGAT AATTCCAATCTACATTGAGATATAGGTTTTTTTTCCAAATAAGTACAGTATGCGAATTGATTTTGTTGTTGTGCTATTGT ATTACACTATTACTGCTATTACTATGCATCTTGTTCCCTTTATGCGGTTCTTATATTTGTTGGTTTATCCTAATGAAGTA TACTTCATTTTAGGATACTCCAGTTGTACCAATTGGGAGGAGCCCCAGGGTTGACGTCCTTCTAAAAGCCGAAAATGTGG TCCTGGAATTCGGTGGTTGTGTTCTAAGATTGGCAGGACTTTATATATCCTTTATAGGATTCAAATTATTAAGATGGCTA GAAATTTGTTGAATCTGAGTTTCCTTTTTGTTATGCTTTTTATCTCATGGCAACCCTTGACCTATTCCACAAAGCAGAAA GAGGTGCACACAATTATTACTTAGAAAAGGGCAGCGTTGATAGTCGTCCTGATCACATCCTGAATCTTATACATTATGAG GTCAGAACGCCATTTCATGTCTAGTTATTTCTTTATTTTCAAGGCAATTAAATTGACTTTCATGAAATGAACCAAATGAA AGTGCGTTAAAAATAGTGTGTTGCTAGTATTCCTCGTCTATTCGTTAGCAGTAACAGTAATGATTGTGATTGGTTTAAAA ATTGTGCTCATTTTGACATGCTTGCACACCAGGATGCAGCTTCCCTTGCAGTTGCAATATTGAAGAAAAAATTCCGTAGA CAGATTTTCTTGGGCTGTGATAATCATCCCTTGTCTAGGTTAGGCACTTTCTCTCTTGTCAAATGGCACTTTCTCTATTC GATATTTTGATCTGTTTCTTTGTAGAGAAAAATCTTACAATGCTCATATGTTTGCAGGCAAGAAATGATGGATCTGGTTA ATGAAAGTGGGAAGTTCAGCAAAAAGTTTGATAAATTTACTGGTAAGTACTATATTTGATGGTGAAACATACATCTTGAA CAGCTGATACTGTCATTTCCTTATCATGAGTTGAGTTGATTTTAGCCGTTATCATGTTTACCATTCTCACGTATATATTA CTTTTGATTCGAAAAACATATTTACTTTTTATCTTCCTTTACAGTAACTGATGGCCCTCTAGGTAAGAGATTAAACAACT CAAGAACCCGCAAGGAAGTTGGCTGGGAGCCGAAGTACCCCAGCTTCGCTCGATTTCTTGCAAGCCTATGACTGACTCCT GAGTGTATCTTTGTGTTTGGATACACATTGACTCACGTTATTTCAGTTTCCAAGACAAGAAAAACGTAAAACACTATTTT CGTAGCAGTTAACGTGAAAGCTTCACTTTCCCTCCGTTAGCATTAAAGTACTTTTGACTTGTATTGCAGCTGAAACCCAA ACATGCTTAGATGTTGATTCTAATGAATGTGGAAAGTACAATACAGAGGTGCCTTTGAGAATTCTTGCAGCAAATGTGAA GTTCATACCCACCTGATATATCATATCAGTTGTTGAATTGTATTAAAACTGGGTGATTTGATCACTTTCATATTGCATGT GTACTTTAGAAGTAAAGTTAGTAGTCATTCTTTTCGTATGATAAATTCTTGGGCAGAAACTTCCTTTCTAAGGCATTTAA CTTTTGATGTGTTCTGTGGACTGTGAGTGATGCATGTCTTAAA
CDS sequence (LotjaGi4g1v0019400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAGGAACCACATGTTTCACAGCTTCAAATGTTGTTCTCAATCCTCAGACTTTCTCAAACCTCTCCAACAACGCTCT GTATCTGGGATTCATCGGTCCTAAGCCTACCCATCTGCAATTCTCTCACTCCAAATTGGAAAGCAGAGTAAAGTTGACAT CTTTTCCAATGTCTAAGACAACCCATTTGCGAGTTTCACAAGATGCATTCACACCCACTGAGGAATCACCATCTTCCCCT CCTCGTGTAATCGGAGAACATGACTTGCTCATTGTGGGTCCCGGTGTTCTTGGTCGTTTGGTTGCTCAGAAATGGCAAGA GGAAATTCCGGGGTGTCAAGTTTATGGACAGACAATGACCACTGATCATCACAATGAATTGATTGAAATGGGTGTTAATC CGTCTTTGAAGTGGACAGAAGCTACTCATAAGTTTCCAAATGTTTTATATTGTGCTCCACCTTCCAAGTCTCCAGACTAT GCTGGTAATGTTAGGCTAGCTGCATTAAGCTGGAATGGTGAAGGTTCTTTCGTTTTCACATCAAGCAGTGCTCCATACGA TTGTAATGATAATGGACCATGTGATGAGGATACTCCAGTTGTACCAATTGGGAGGAGCCCCAGGGTTGACGTCCTTCTAA AAGCCGAAAATGTGGTCCTGGAATTCGGTGGTTGTGTTCTAAGATTGGCAGGACTTTATAAAGCAGAAAGAGGTGCACAC AATTATTACTTAGAAAAGGGCAGCGTTGATAGTCGTCCTGATCACATCCTGAATCTTATACATTATGAGGATGCAGCTTC CCTTGCAGTTGCAATATTGAAGAAAAAATTCCGTAGACAGATTTTCTTGGGCTGTGATAATCATCCCTTGTCTAGGCAAG AAATGATGGATCTGGTTAATGAAAGTGGGAAGTTCAGCAAAAAGTTTGATAAATTTACTGTAACTGATGGCCCTCTAGGT AAGAGATTAAACAACTCAAGAACCCGCAAGGAAGTTGGCTGGGAGCCGAAGTACCCCAGCTTCGCTCGATTTCTTGCAAG CCTATGA
Protein sequence (LotjaGi4g1v0019400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTGTTCFTASNVVLNPQTFSNLSNNALYLGFIGPKPTHLQFSHSKLESRVKLTSFPMSKTTHLRVSQDAFTPTEESPSSP PRVIGEHDLLIVGPGVLGRLVAQKWQEEIPGCQVYGQTMTTDHHNELIEMGVNPSLKWTEATHKFPNVLYCAPPSKSPDY AGNVRLAALSWNGEGSFVFTSSSAPYDCNDNGPCDEDTPVVPIGRSPRVDVLLKAENVVLEFGGCVLRLAGLYKAERGAH NYYLEKGSVDSRPDHILNLIHYEDAASLAVAILKKKFRRQIFLGCDNHPLSRQEMMDLVNESGKFSKKFDKFTVTDGPLG KRLNNSRTRKEVGWEPKYPSFARFLASL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 48 | 346 | 299 | 1.9E-154 | – | |
| PANTHER | 48 | 346 | 299 | 1.9E-154 | – | |
| Gene3D | 84 | 348 | 265 | 9.5E-42 | – | |
| SUPERFAMILY | 94 | 342 | 249 | 3.09E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0019400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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