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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0032500 |
| Transcript ID | LotjaGi4g1v0032500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier protein; TAIR: AT4G15010.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|Q75AH6|AGC1_ASHGO Mitochondrial aspartate-glutamate transporter AGC1; TrEMBL-Plants: tr|A0A072UNH0|A0A072UNH0_MEDTR Substrate carrier family protein; Found in the gene: LotjaGi4g1v0032500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:3971480..3976746) extracted from Lotus japonicus Gifu genome v1.2.
ACCAAACAGAACAAAGCATATTTGTGAGCCAGAGCCAGGTGGTAGTTGCCTCCTCTGCCTCTCAGTCTCAACTCTCGCCT CCTCAGCGAGTTCCCACCTGCGCCGCTGCTTCCACCGTCACCAGCAGCCTTCATCTCGCCTCTGCTGTTTCACGTCCAGG TAATTTCGCCTCCTCCTCTGTTTTCATCTGAACATGTTTACTTATTTGAATGTGCTTTTTAATTCTCTGCTTGGCTTACC TGATTGGAAATTTGAAATGTGGGTTTTGGGGATTTGAAATCGTTTCTTGTGTAAATTTGGGGTCTTGTGAATTTGCTTTT CAATTTAGGTTGGTACTTGGCAGTGGGGAATACAATCTAATGAACATGATGGTGGTGTGTTTCCATGTTTCTGGGAGCTA ATATTCGCTGCTCTAGTATGGTTCTGTTTTTTGATCGAGCTCAATGGCGTAGTGTAATCCATATAGCCGACCTCACTTAG TAGGATAAGGCCTTTTGTTGTTGTAGTGATGCTGCTCGCTATCACTACCACCTGCAGCAGTGGTTCTTCCATCATAATTA TTTGCTATGACTTGTTTAACCCCACCAACACTGGTGGTTTCCATTTCCCTCTTGAGTCGGAGCCCACATGGTGAGTGGCA AGGGACTACTACCCGTGCCTGCCCCACCCCGTTTGCTATGAAATGTTTCCATTTCCCTCTTTAGTATGCAATTTATAGGT TATGATATATACTATCGGTGATTAAGCGGTTTGACCAATGTCATAGTACCTTGACGGAGTCAATGACCCATCTGAGTTCT ATAACTTTGGTTTAAGGAAGGGATTATTACATTAGGCAGTGATAATCAACGAATTAAAAGCTACATGTAGAGGTTCTCTA AGAATTTTCATTTTTTTTTTCTTTTCTTGTTTAGGTGTTAAGATGGACGACTTGTCCAAGAACCAGATTTTTGCTGTTCA TGGGATTGCTGGTGCTGGGTCAGTGGCTTTAGCCACAGGTTTTACCTATCCTCTGGATACCATTAAAGTCCTCACTCAGG TTCTCCCTTTCAGAACCCCCTTTCTGTTAAATGAGTACAAAAATGATGTTCAAACTAGTCTCTTTTCTTATTTTGCTTTT TTTAAACAAAGGTTGGTTCCAGTGCCGGTAAAGAATTGAATGCTGCTGAGGTTTTAATGAGAGTACTCTCTGTGTCGGGT AATGCAGGTATGCTTTCTTTTGGAAATTAATTTCGTTTGAACTCTCTGGTGGGCTTGGCATACTCGATGATAAGTTGCGT GGAATAACAATACTGAAACTTTTGTTGGTTGCAACTGGGTATAAATGTAAGCACGCATAGAAGACGTGGAATGTTGGGTG ATAGTTATTTGTGTTCTCTTGCTATTTCCATGGATATTGTACTGTTGGAACTGGACCAAAGTATTTTTTTCTCATCCTGT TTTTGAAGGATTAGCTTAAAAACTTGTTAAATAGACGTAATGTACTAAGTAGTTTGTGCACTGGATCAATATAAAGTGAC AGTTGTTTTGGCACTTTGTGGATTTGGTCTGATGTTATAGGTGTTAAGAAACTAACTGCATGTCCCTGCTGGCTCAGCCT ACAAACTTATGCACGCTGTATGTTAACTCGGTATCTTGTTATATTTGGGAATTTCAGGTCTGTTCAGTGGTTATGGCTGG TTGGCTTTTGGAAGGACTTTTGGTTTGGGAGCACGTTTTGGGGTTTATGAAATCCTGGCAGCCTTTTCTAAAGGTAATTC CTTTGTTTTCCTTTTATTCCTTATGTGTGATTAGTATCCTTTTTTTCTTTCATTTTTTTTTTAAATATGCATAAAAGAAA ATGGCGCTACTTTGTTTTAAATTAATGAGACATGTTTCTCTCCACATCAATCATTCAATATTGAAGTTTTGGTTATTATT TCGGTAGATTGCGTAGCAATCTCAGATTTTGAGATGCCTGTTGTTTGTTTGACCAATAGGTCATGGGAGCTTGGGTCTTT TTATTTTTTCTATATCTTCTGGGGTTTTCTATCTGTGAATTACGATCTTACAGTGTTTTATTTTCTAAGTTGAGAGTGTT TGGGTGCTCACGTTTGCTTTTTTGGCAGATGGTCGGGAAGATAATTATGTCTATCCTTCAGAGGCTCTTTTGGCTGGCAT GGCAGCTGGTGCCATAGAGACATTCATAAGCTCTCCATTTGAACTCATTAAGCTTCGTATGCAAGTTAGCTCTGCTTCAT ACATTCCAAGCTCTAACTTTGCTTTGGAAGAGGGGGGCCGCAAACCTTTAGTTGCAAGATTACTTAATGGCTGTCATCCA GAAAAGAGGTCTTTGAACCAATATGTTGATCTCATCTCCACCCTAAAACCCAAAAATGCTAACTTAGAGGGTGCTTTACT GGAGTATCCATGGACCATGACAGGATCTGGGAAGCCACCATCAGTTTGCAATGTGAGAAGGCCATCAGATATTATATCTT TGGAAGGATGGAGTACATTATGGAGAGGTTTCCGTTCTGGACTTGTTCGAGATTCTGTGTTTGGTGGTATATTTTTTTCA AGTTGGCAACTTTTGCACCAAGCCATGCTTGATTGGAAGGCTGTAGGGATGAATCCTCCACCCAGGTTCATCTCTTATTC ATTAATTAAATGAACATTTCTTATCTATCATTCTTTCTTATATTTTGTTTAGTCATCTATGTTTTATGAAGTATACAACA ACAACGAAAGTCTTATCTAAGTGAGGTCGGCTATATGGATCACCCAGCGACATTGCGCTCGGTCAAAAACCAAATTTTGT GAGATATTATTAACCATAGGGTCACTTTTAATAATATCTTTCAATGTCCTTTTTGGCCCCTCTCCACACCCCTTGAAGGA CTAAGAACCATGTTATCAAGTATCAGCCATTCTCAGTGGTGTCTTCTAAGGACTTTCTTTGCACATGTCGAAACCATCTT TACTGATTTTCTGTCATCTCCTCCTCGATAGGTGCCACACAAATATCTCCTCTTTTACAATCATTGCGGTTCCTTTCCTT TATAGTGTGGTTACTCATCCATCTTAACATTCTCCTTTCCGCTACTCCAACTTATTTCTCATGTCCTGTTAAAGCTTTCG TTTTTTGTCATTTCATGTTAATGTTATGATGTATAGCTATGAGAAAAAATTCTGATTTGGGAGATGTCAAACTATAAGCT GATGATGTTTATCATTTGGGAGATTTTCTGCTTTCCTTGTACATAGATTGAGTTGCAACTTGCTATAACCTTTAAGTCTG AAGGCCCTTATTTTTTTTGAGGACCTGTTCAATAAACTATGTAGTATGTATGGGGTTGATGTGCCCCTCTCCCTATTCTG TTTGGTTATTTTTAAGTGGATACGGGATACCTTATCCTCTACAGTTTTCTTCCAATTAAACTAGTGATCTGTAGTTTTTG CACCTAAGGTACTGATTTACATCTGGTGATGGTTTGTATGATTGGATTTTTCATGCGATCCTTGCTAAATTAAGTGTGCC TACCCTGACTCAGGTTAAATGAAGAGGTTGGTCCGTTGTCTCCTTTGGCCGTTAGCCTTGCTGCTGGAGTTTCAGGTTCA GTTGCTGCTGCTGCTTCTCATGGTTTTGATACTGCAAGAAATAGAACACAATGTACTGTTCTTCCAAAGGTATGAACATT AGTATTTTTTTTTGAAAACATCTTGTGAATTATGGTCTTCTTGTTTTGGTTACTCTTACATGACATATAATGCCTTAATC ACAAAAAGGAAAGTTATTTTCTATATAATATTTTTGGCATTCTACAATAATATTCTGAGCACTGCATTGTTTTTTTTTAT TAACTTAAAAATAATTTGTATTTGAAAGATAGAAAGGGTACAAAAGGTTACGGAGGTTAAGATAGTCTCCTTAAACTAAA AGAAAAACAAACACGATTTTATACAGTGTATCTCTTTAAAGTTTTTGACACAAAAAAATCCCTTTAAAGTTTAAATCGCT ACTTTTCAATCCTGGAGCAGTGAACCATCTACTGAAGATGTTGCAAAAACTGTCCTGTCCCAGATTGCCAGGTCAGAACT TGAATCGAAGTTCAAGAACTCAGCCTCCTTTTCACCCTCAAATAAAAGTTTTCTGTTAAATCCCATAGGGTGGAGTCATT TCTTATTTCCAGAGTTGCTCCTTTATTATCCCAATAAGCACCTATAGGATATTTATTATCTCCTGATAGCCATCGAGTTT TATGTTTTCGCACTTGCTGTTTAGAAGTTTAGTACTGATACCTGGCTCGTGAAATAAAACTTTAAAACTGAAGACAGTTG GTTAAAATAGTGTTGCATAATGTCCAATGAACCAAATTAAGCTCACTAGTGGGTTCAGATTATCATAAGTGATCTGTAAT TCAGATTATCATCTCTTTTTCGGATCTAAAGTGAGGGGCACACTTTAGAGGATGAAGTGTGAGGATAACAGTAGATTGAA AATTCGACGGTTAAGGTTATGATAAATACACATATATAACAAACTATGAAATTGTTAAAATCTCAACCATTTTTTTTATC AACATTTGCAGCTGCACTTAACCCTCTAAAGTGCATCTCTCACTTTACATGTTTTCTTGTTCCAGTATGTCTCTATGGAG AGAAAGTTCTTGAAGTGGAAACGGCTGGGAAACAAGTTTGAAAGAATTACTGGGATCCATCCTTCTGACAGAAATGTCTT GTTCCGGGGTGTTGGGTTGCGGATGGCTCGCTCTGGTCTTGCATCATTCATGGTTGTAGGAAGTTATTTCTTTGTTGTTG ACCATCTTGCTTCTAGTTTGACTTAATTGCCACATAATGATACCTCTTTTTGATTAGTGTTTAATGTTTACTACTTTTTT CTCCTAGTGAAGAACAGTCACATAAATTGGTGTGCTGCTCTGTTCTAGTCATTAAAGAAAAATAGAAAAGAGATAGTACT TGATGCTGAATACAGTTGAGTTTGATACTGGTTTAGATCAGTACATTGTAATCCAGAGATTGAAAGAGAGGACAGCATCT GTTCAATACATACGAAAAATCCTTCTGGTTTGGGGGATTTGCAATGGCAATTTGGTTTTCTTATCAAGATTTTGTACCAT CCAATGACTGATTTTTAGCATGTATTATTTCATCCTATTCTTAGAGTTTTGAATACAAAAGTAATTAGCTTTATGAACAA CACACCCACACACACCCGTTTTTCTCCCTGAAGTCTAACGATTCTTGTCTATGAGCTCGTTTGAATA
CDS sequence (LotjaGi4g1v0032500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGACTTGTCCAAGAACCAGATTTTTGCTGTTCATGGGATTGCTGGTGCTGGGTCAGTGGCTTTAGCCACAGGTTT TACCTATCCTCTGGATACCATTAAAGTCCTCACTCAGGTTGGTTCCAGTGCCGGTAAAGAATTGAATGCTGCTGAGGTTT TAATGAGAGTACTCTCTGTGTCGGGTAATGCAGGTCTGTTCAGTGGTTATGGCTGGTTGGCTTTTGGAAGGACTTTTGGT TTGGGAGCACGTTTTGGGGTTTATGAAATCCTGGCAGCCTTTTCTAAAGATGGTCGGGAAGATAATTATGTCTATCCTTC AGAGGCTCTTTTGGCTGGCATGGCAGCTGGTGCCATAGAGACATTCATAAGCTCTCCATTTGAACTCATTAAGCTTCGTA TGCAAGTTAGCTCTGCTTCATACATTCCAAGCTCTAACTTTGCTTTGGAAGAGGGGGGCCGCAAACCTTTAGTTGCAAGA TTACTTAATGGCTGTCATCCAGAAAAGAGGTCTTTGAACCAATATGTTGATCTCATCTCCACCCTAAAACCCAAAAATGC TAACTTAGAGGGTGCTTTACTGGAGTATCCATGGACCATGACAGGATCTGGGAAGCCACCATCAGTTTGCAATGTGAGAA GGCCATCAGATATTATATCTTTGGAAGGATGGAGTACATTATGGAGAGGTTTCCGTTCTGGACTTGTTCGAGATTCTGTG TTTGGTGGTATATTTTTTTCAAGTTGGCAACTTTTGCACCAAGCCATGCTTGATTGGAAGGCTGTAGGGATGAATCCTCC ACCCAGGTTAAATGAAGAGGTTGGTCCGTTGTCTCCTTTGGCCGTTAGCCTTGCTGCTGGAGTTTCAGGTTCAGTTGCTG CTGCTGCTTCTCATGGTTTTGATACTGCAAGAAATAGAACACAATGTACTGTTCTTCCAAAGTATGTCTCTATGGAGAGA AAGTTCTTGAAGTGGAAACGGCTGGGAAACAAGTTTGAAAGAATTACTGGGATCCATCCTTCTGACAGAAATGTCTTGTT CCGGGGTGTTGGGTTGCGGATGGCTCGCTCTGGTCTTGCATCATTCATGGTTGTAGGAAGTTATTTCTTTGTTGTTGACC ATCTTGCTTCTAGTTTGACTTAA
Protein sequence (LotjaGi4g1v0032500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDDLSKNQIFAVHGIAGAGSVALATGFTYPLDTIKVLTQVGSSAGKELNAAEVLMRVLSVSGNAGLFSGYGWLAFGRTFG LGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIETFISSPFELIKLRMQVSSASYIPSSNFALEEGGRKPLVAR LLNGCHPEKRSLNQYVDLISTLKPKNANLEGALLEYPWTMTGSGKPPSVCNVRRPSDIISLEGWSTLWRGFRSGLVRDSV FGGIFFSSWQLLHQAMLDWKAVGMNPPPRLNEEVGPLSPLAVSLAAGVSGSVAAAASHGFDTARNRTQCTVLPKYVSMER KFLKWKRLGNKFERITGIHPSDRNVLFRGVGLRMARSGLASFMVVGSYFFVVDHLASSLT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 378 | 377 | 1.2E-167 | – | |
| PANTHER | 2 | 378 | 377 | 1.2E-167 | – | |
| ProSiteProfiles | 8 | 94 | 87 | 12.473 | ||
| TMHMM | 9 | 31 | 23 | - | – | |
| Pfam | 10 | 93 | 84 | 9.7E-10 | ||
| Gene3D | 10 | 153 | 144 | 1.0E-20 | ||
| SUPERFAMILY | 11 | 366 | 356 | 2.35E-40 | ||
| ProSiteProfiles | 104 | 255 | 152 | 9.148 | ||
| Pfam | 107 | 141 | 35 | 2.3E-6 | ||
| Gene3D | 212 | 380 | 169 | 4.4E-11 | ||
| ProSiteProfiles | 277 | 374 | 98 | 5.908 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0032500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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