Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0041600 |
| Transcript ID | LotjaGi4g1v0041600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MADS-box transcription factor; TAIR: AT2G14210.2 AGAMOUS-like 44; Swiss-Prot: sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27; TrEMBL-Plants: tr|A0A0R0FWL7|A0A0R0FWL7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0041600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4875051..4884829) extracted from Lotus japonicus Gifu genome v1.2.
CACAAAGTTCCTTGTTTCGTCTCCTCCATCTTCTTCAATCTTTGCTTTCAGCTCCAATATTTTTCAAGCAAGTTACTTTC ACTATTCATTATTTTGTTGCACTTATAATTATTTATTAACATGTTATCCCCTTTCCCCCATTCATATGTGTGCACCAATC GTTCAGATTTAATTTCCTTTCAATTCATGTTGATTTTCTTCATTAGCATTCGATGTTTCAGGTTTAATTTGTTGATTGAT ATACCAAAAGCAATTTATGAAAGAACCCTAGTGAGTTTTGACTTTTGATCGACGAGAGATCGCGATGGGGAGAGGAAAGA TTATCATTCGCAGGATTGATGATACATCTAGCAGGCAAGTGACTTTCTCAAAGAGAAGAAAAGGGTTGTTGAAGAAAGCA AGAGAACTTTCTATTCTCTGTGATGCTCAAGTTGGACTCATGGTGTTCTCCAGCACTGGAAAGCTTTATGACTATGCAAG CACCAGGTAGGATCCAATTTCTTGTTTGTTCCCTTTGGTCTCTTTTTTTTCACTTGGTGATTAAAATTCACAACTCTTCT TTCAGGTTGAATAATTAATCTTCTAAATTTACATACAAGACTTTGAATCTCATATACTTTATGGTTGCTTCTTAATTTGC ATTTTATTAATCTCAGGTGTAAGTTTATAATAATAAAGGACAGTTATATTGGTATTTGAAACATGCCAGGAAAACACCAC ATGATGAGGTAAGGGATGCATTATTGGGGAATCTATCCTTTGCCTTCCCCCCTCTTATAAGTTATAAGTTAATCTCATAT GTTAATTTAGATAAGCTCAAAATATATTATAGATAAATATAAATATACTTATTAATTAGTTAATCTGAGTAACCTATAAA AATAAGTTCAAAATAAATTACACATAAATCATAAATTATTTTCATAAGCAAACTCATACTTTCATATAAGTATTTTACAC TTCAAGAAGTTCAGTTAATCTCTTCTAAATACGGCCTAAGTCAATCAATCTGTCATTTTATTTTTAGAAAGGTCATGAAA TGAGTTTTTATATGAATATTGGAGGTGCATGTTGCAACTCAGTGTCCTATATATGTGCCTTTATCTGAACCCAATCAATT TCCCACAGTGATGCTTATGGGTTGAGGTATAACAAAAACTGAACTGATTATATTTAATTGATTTGGTTCGAGTTTTTAAA ATTTTATCTACTAATCCTAACCAAACTGATCCATTTAAAATCAAGTGTCACCAAGTTGAGATATAGAAAATAAATCATTA TTTTTTTAAGTTTTTATCTGCATATATTTTCATTTCTTATATATAAAAATTTGAATTGCATGATATTATATTACAAGTAA ACAAATATATGGTCTCTGAAGAATAACTCAAGTGATAAGAGTTGACGGACAAATGAGTTGGAAAGGGAGGTAAAAAATCA ACCATGGCTCAATGTATCTTTCCTTGCATATCCTCTTCGACAACTAAGGTCTAAGGTTGAAAAATGCAATGCTAGGACGC TAAGGGTGCAGACACATGCCCCAAACAAAAACAAACCTCAAAAACTTTATAAAAAAAAAGCTCCTAAAATCAGAAAATAA GCAACCAAAACAAAAACCTATTCTAGGACGCTAAGAAGAGAATATCGTCCTAAGTTCTTTCTCCAAGCCACATATAGCTT GGAGGTCACTGCTTGAGTACTCAAGACCCAAAGCTTTTCTGATAAGTCATACATTTTAAGTTCTAGTACAATATCTTCTA GCAGAAACCGCATCTGAAGGTGCAGACTCTAACACCTCTACAGAAATAGGAGCGTAAAACAAGCCACCTCCTCCTACAAA TCCAAAGGTACAACATCCTCAAAGGGAAACCCCCACAGACTGAGAAGACCGCCCTCTCTTTTTATTCTTAGGACGCCCAC GAGGCCTTGTAGAAAATGACTGAATCATGTCCCTCCTCTGCCGAGTCATCGTCTTCAAGACAACCTTCATTCACCTGAAC AAGATCTAGAACCCCAAAAAGATATCCGGAAGAGAGTCTCTACTGGAATGTTTGCCTCCAAATCACAAAGAATTTTTTTT ATCCTCAGCCATATTCTCATCAATCGGCGAGCCGCGTAACAATCCGTTTAGAACCACCATAATCCTTTTCAACAGCCTGA CCCTTCTTCATGATAATAACCTCATTAGAAGAGAGTGGGCTAGCCAAGCATCCTCAAGATCAAACGATCTCACCGCACTA GTGGTCAACCCAAACATAAAAAAGGATCTACTCCCACAGCCGAAATGTGGTATACGAAGCCACAAGACCTCTAAGCTTCT CTCCGCCACCACCAAGTCACCGAAAACGACTGAATCTTGTCCCTCCTCTACCAAGTCGTCGTCTTCAGGACAACCTTCAT TAACCTTAACAAGATCTCTAGAACCCCAAAAAGATATATCCGGAAGAGAGTCTCTGCTGGAATCTTTGCCTCCAAATCAC AAAGGCAATTTTTATCCTCAACCATCCTCTCATCAATCAGCGAGCCCTGTAGCAATCCCTTTAGAACCACCATAATCCTT TTGAACAGCCTGACCCTTCTTCACGATAATAACCTCATTAGAAGAGAGTGGGGTAGCCAAGCATCCTCAAGATAAGACGA TCTCACTGCATTAGTGGTCAACCCAAACATAAAAAGGGTCTACTCCCAAAATCAAAAGGTTGTATAGGAATCCCCAAGAC CTCTAAGTTTTTCTCTGCCACCGCCAAATCGCTTCATACGACTGAATTATGTCCCTCATGTCTCTATTGGAATCTTTGCC TCCAAATCACAAAGACAATTTTTATTCTCAACCATCCTCTCATTGATCAGCAAGCCACGTGGTACCATCGACTTCCCAAC TTGACAATTCCTCCAAGATGAAAATCTCAAATAAGCCCCATTCACTTGCCTTCCCTACATCCATTAACTCCCCAACATCT TCCCCCGAAGCCGAGAACCAGCGCCCACCTTTGTAGGAGCCGCACCGGGAATACCAAAGAAGGTTACTAGCTAGCTAGGA TGAAAATACTTATTCCAAGAGGCTTGTTAATCATGCCTCTGCTTCTTTAGGGTGGTTCTATGGTTGGGTGTTCGTCCTAC TTGAGATGGTAGCTGTAAAGTTTTATTACTTTACTAATAATTATTTTTCTTTCGAAAAACATAATTTATTCCTATGACTC ACATTCTCATCATATAATCCTTGAATTACACTGTTAAAATTAGATTTTGATTAAAATGTTTTCTGAGAAATACATTTTCT GAGAAATACATTTTCAACCAAAGTTTTGTCATACTATTTTGAAAATATTATACATCACGGGAAATATATACGCACTAAAT AAAATGTACACTCTTGTGATAACCATTTAAATTTAATTTACTCGTAGTATAGAACTTCATATTTTTTGGTAAATATAGAA CTTCATATAATACAATACGCTTTGAGAATATTCAAATTATGCAGATAAAAGTAGTGTTTCTTTGGATGTATGAAAATATC ATTTTTCATCTCCCTAATATGGATATCTACATTTGTGGCAGCATGGAGTCAATCATTGAGCATTATAACAAACTAAAAGA GGACCATCCTCAACTAATGAGTTTTGCGTCAGAAATCAAGGTAACACATCTCCTATTCTACTTATGCATTATTAAAGCAT CATTGTTTGCATGTATAACCATGTCTGACTTAGGAAATTTTTTTGAGAATTTCTAACGAATCTAACTCTAACCAAATGAG GATTATCTAAGTTTTTATTTATCTACTTTTACCAAAAATAGCATTTTTATTTAACAAGAAAAATAGGAGCCCAAAGAGTG GTTAATACCCCCACAATTTGCCCAAAGGGCTACCAACATGCACATCATTTTAGCTAAATTATCCACAAAGTGATTCAGCT CTCTAAAGACAAAAACAGTTTATGACCTTCCAATAGCTAGTAATCATTCAAATGTAGAGTATTCTGAAGCTTCTATATAT GGCCTGTTCCTTCCAACTTTGACTCAATCCACAGCTAGAGAGAATCGCTTTCAAGGATGATATTCTTAATATCAAATTCG TGATAGAACATAAAGCATTATAGATCTCATAACTTTCGCTTCAAAAGCTCATGCCCTCTCAATAGACTTTGAAAAGAAGC CAAGAACTTCGCCTTTATGATTCCTTAGAATCCACCAATACCACTAGGTCCCGAATTACTCAAGAAGTGCCATCCTCCTT ATCCAATTGAATATTTGGAATGTGCAGTTTGTAAGACTAACAAATGTAATTAATAAAAGTATTCTAGGGTAGTCGCTTCT TCTTCTTGAAAAGTAGCCAAGAACTTCTCCTTTGTGATTCCTTAGAGCCTACTCCTCCTCCTCCGTCATATGCTCCATTG AATCAAAGAATCCAGGTGGAAATATTCTCTTTACTTTATATATGATTATTGAGATTTTTTTCTCCAGCCTATATAACTCT TCCTTCCTTAATCTATTTGAACACAATTCTTTAAAAAATGACTTAACTCTATAAGTGGATTCCTCACATCAATTGGAAAT GAGGTATAAGAAAGAGGGAGTAAAAACTGCAAAAAAAAATGCTAGTAGTGATATCATATGTGAGGACACTAGTAATTCGT AACTCTTGAAACTCATCAATTAAGCGATTCAGAAAATTAACAGTAAGTACATTTGGTTTGGACGACGCTAGAGTACGACA ATTCAAAAACATGAAACGTCTAGATATGCATATTTTAGGTGAAAGGTTGTATGTAACGATGACAAGCTTACATGAGCATG GTTTAATTTGTGTTCCCTTGAATATAAGGTGTTAAACCATAAGAACATAAACTTTTTCTCACATTTCTAGGCTCACTCGC AAAGTCTGGATAATTTCATCAAAATGCAACCAAGCATCAACATCACAACATACCTTGAACACAACAGTTAATCTTTTGAG CCTTCAATCCTAGAACATGTACCAACTTCTTTGCTTGAATTTTTTGGTATTAACTTAATCCTTAGGCTACGTCTAAAAGC ATACTTGCAAAAATAATTGAGACACTACTGAGACACTCTCTAGTTAGATTTAGCAGCCAAACAACCACACTCATTGATAA TTTTGACACAAAATCTCCTTCGTATATGGGTTGGTTGGATAGTCCTGGCAAATAAAAAAAATATTGAGTTTATTTAGGCA GTGGCTCAAACTCTAGCCTAAAAGCATCGTGCAACATATGTTGCATAGCTATAAAACTGTCTTCACCAACCTTATTTACA CAACTACTTGAATGCTCTTCACCATGATGGGTCCAAATCTATGCCTATGTTTAAACCCAACCTTACATAAGTGATACTTC ACTCCAGTGCTTAGCTATATCTTCTTACATCTACCCCTATATGGATCTATAATCTCTCCCTCACTTGAATAAGATGTTGC TATTTAACAAATATCACAAATTCATAAAACCCTTATAGTAGAACTTAGACTTTATCTTATCATACACTTAAATACGATTA CTTGGGGGGTAACATAGCACATTTTTTATGTTAAGGTCATAAAACTGTAAGTCTCTTAAGTGTGGAGTTTTTTTAACAAA GCTCTAGTACGATTTAATATTATGGTTTCATAGGAAAATAGGCAAATTTTTAAATGACTTTAGTGCTTGACTGTATCTTC TTACTCTTTCAAAAAAAAAGACCATATCTTCTTACACCTACCCCTATCATATGGATATCTAACTCTCCCTCACTTTAGTG ATTGTATGTCACTGAATTTTGAAAAAAAAATGACTCATGTACAAAATAATACTATTCAAATTTTTTTCTTCAAAATTACT AAAATACTTTAAGATAGCATAATTGAGAGTAAACTATGCCCTAGGTTTTTTATACTTAGCTATTTCAACCTCACTTGTAA GTTCTCTTTTAGGACTTAAGCACCTTAATGTGGAGAGAATATTTTAAAATGTGAAAATTATGTCTATTTCACCTCTCTAT TAGTATCATTTAGCCTATAATTGATTTGTGTCATAAACATCTTATGTTTTCTTACATCTTGCTAGTTTTGGCAAAGAGAA GCGGCAAGCTTGAGGCAACAACTACAACATTTGCTTGAATGCCACAGGTAAAAGGTTAAAAACCCAACAATTTCATAGGT ATAATCTTTTTCGTGAGGAAAATTTATTGAACAGGAATCCAAGCGATATTCCAACCATAAACTGGAAAGACAAAGTTTTA CAACTTCTAATCGACTAAATGAGCAACACATTCAACCATATTAATACACTCTGCAGCAGATGAAACTAGTTTCCTTAGGA TAAAACCAAGAACAAGACATAAATGTAGTTCAATCTAGAAAGCCAAAGGAATTAAAGGACTGATTCCTAAGTTTTCTCCT TTTATGCAAAAGTGAAAAAGGTTAAACTATGACATGTCATAAGTAATGAAAAGCACATGCCATAACTTATCTCTGATATT TGAGGGGCTAATATTGGAGTAGTAAACCAACCATGCATCCATATTAGCCTAAATCCTAGTGAGAAGAACTATGTTAGATC AGTAAATGGGGTGTATTTTCATGTTGATTGGAATATAAAACACAAGTCTACTTGTTGAGATGAGAGAACATTCCTTTTAG AAAAAAATCCTTTGTTAGGACTCCATCCATTAAAACACCTATGATGTTTGATGAGTCAAATATTTTAAAAGTTATTTATA GCTTGTAGTTTGATGATAGAACTGACTAATGTAGGCTACTATAGCAGAAAGAAATCAAAAATACAAGATATTGAGGAAAT TTGAATGACCTCCTTTGATTTCCACCATCTAGTGAATAAAGCTAGTGAATTATTGCCTGATAGTTATAATTTACTACTAG CTTGATCCCAACTAACTATCTACCAATTAGTATAATTGTCTAACTACTAACAGGTTTGTTAAGAAAATCCAGAATTCTCC CCCAATGTCACTTCCCTCTGCTATCCTATGCTGCTTCTTATGATAAACCTTAGTAACAGGAGGTATCGTCACCCTATCAA TTCCCTCCCATTCAAATTCAGCCTTATCCTAAAGGTGGGAGATGGAAAGTGTCTTGCACTAACTGAGCATTATCCAAAAT ATTTCTCAATAGAGGAAATTGAAATCATTGGAAAGAAACCCCCACTCCCTAGTTGTGTTTTAAACTTTCAAGTATCTACT CTGGTTGGATTTGGATAAAGTGGTCCTTTTTAATAATTGGAGGAAAAGGATGAGGTTTGTTGTGGGGCTAATACTGATTC TTAACTGAATTTCACATTAGTCACGTAAAATATGCAAAAGATGTGGCATAAAATTTCAAAAGTTTTAATGCTTGGATTAC CAACTGCACCTAATGCAGAGAAAAAGTGCAATAGAGAAGGTCCCTAGTATTATTAGGAAAAAGAACAAATTTGTCTGACA ATTTGGTATAGGACAAGAAAAAATTCAGGTAACAAGCTATGTGAGATGCGGCCCCAGAATCTAAAATCCAAGAATGAAAA CGAACTCAGGTAAGGAAGATGATGTGGAAGAAAAAAAGCATACAATCTTGGACACCAAAAGACTGATAGATAGAAGGTGA TGTTGCTTGCGAAAGGTGAGGTTGCAGCATTTGTAATAATTGTTGATACTGTTGAGAAGTAAAAGGCAAAGTAGAGGAAG ATGACTTGGAATCATCTTCAACAGAAACATGATTTACATTGGACAAAGGCTGTGATTTCTTGTAATGTGGTGGATAGTCA TGAAGTCTGAAGCATTGATCCACTGGAATACAATGAGACAGCAATGTGAGCAGAAACCGAGAAATCTCATCTGGTACCAT ATTGAACTAGAGGTTTGGGCAGAAAATGAATATCTGCTTTCAATTGATCAGCTAAAGAACTATATACAACAGTTTGTTGC TTACATGACTAACAGAATAACTGAATTGAGCTGAAACTAATTCAATTTCTAACTAAGTAACTACCAAGAATTAATTAACT GATTCACTAACCAATTCACAACCTCCTAACTAACTAAAAGACTAGCTAGTATCTCATAAACATCGAATCTGAACATAGAT CCACTGCACAATTTTTGAAATCAATCCCCTTCTTGTATAGCAATACCCTCAATAGTCATTAGTCAATACACTATGCTTTC CAAGATATTCAAACATTTTGCATAGAAATTAGAACAAACAAACACTCTCAGAGGATCCTCTGCACCGCTACCGCTTAGTA TTGAACAAATCTAACACAAACTAGAATTCCGTTTTTTTTGTTTTCGGTAATGCAGGCAATTGATGGGTCAAGAAGTTTCT GGTTTGGGTTTTAATGAGCTACGGCATCTAGAAAATCAACTGGAAATCAGCTTGAAGAACATTCGCATGAGAAAGGTACC TTTATGGTTTGATTCGATTACTTTTTAGTAAAACAAAATTTTAATTCAAACATGCTAGAATTAAGATACATTTTATAATG TATGCATAAAAATCTTACACGATCATTTATTTGCCTGCAGGGTCAAATTTTTAGTGATGATATCAAAGATTTACACCAAA AGGTTTTAGGAATCAAATTTTGTTCCTTTTGATAATTCACAGGTTTTCCCCACAAATTTTTTACCCATTTCGGTTGATTC ATGCCATTGTAGGGAAGCCTCAGTCATCAAGAAAATGAAGAACTTTATAAGAAGATAGACCTCATCAATAAGGAAAATGC AGAACTCAGGAAGGTAATCCAGTCAAGAAGACATATCAATACTTAAGAAAATGTCATTTTCGCATACTTGATTACTCATA GTTTGTCAAATATTATGACAAAGTGGGACTGAAATCTTATGTACTCAATTGGTGTCTCATTTTCTGGTCTCACCAATTCA ATAGTTTCATGTCAGTAAACCACCTCATGGAACTGTATCAGGTGTCTTCTTAATTGGCATGTCAAAATCTAAATGGTGTG ACTGAAAATGCGAAACGAATTGGAAACAGAAGATTTTCATCTGACAAAGTGACACATGCTCAATGAAAAAGGCTACACAC ACAAGCACTACAAAAGATATGGTTTAATTTCAAAGTTTCAAAAGATTTCTTTCATATACTGAGCAAGAGCTATTTCTGTA GAAGCTAATTAAAGACTAAGTTTAGTTTAACTAACCCTAACTAAAAGCTTTGGATCTTAGGTTATAGAAGCAAGGCATGG AGAAGAAGAAAATGCACCATCCATTAATCATTCATATACTATCAGCAATGGATCAGATATACTTGAGCCAATCAGTCTCC AGCTAAGGCAGCTACAACCCCAATACAATGAACCAGCAACCAAAACAATGAATCTGGGGTAGTGCCTCAAACTATAATAT AAATCATAGAGCTTTGTCCATGACTTACTATCCTTAATTTTCACTATAAACTACTTTTCTAAATCCTGCATTAGAATATA GCAATATTAATAAAATCTTCTTCATAATCAGGTTGGCTTTTCATTTGTGACAAGGCATCAACAACTAACAGCATGTTTGG ATATCAGTTGGTTGAACTTTAAAAGCAAATTTCCCTCTTTCCAATACAAAAAAGCCAAGGGATGCAGTGAGAGGGAATGT GCTTTTACTTCTGTTCAACTTTTAAGCAAATATGAGATGATCTATCTAGAAGCTTTTATATACACTAGCTGTCAACAATA AACTCTGAAATTACCTCTGTAATATGCAATAAAGATACCATCATTGTGCTGGTATTGTTTTATAATTTCTAAGAGTTTGT ATATGAGCTTGTATAGGAG
CDS sequence (LotjaGi4g1v0041600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAGAGGAAAGATTATCATTCGCAGGATTGATGATACATCTAGCAGGCAAGTGACTTTCTCAAAGAGAAGAAAAGG GTTGTTGAAGAAAGCAAGAGAACTTTCTATTCTCTGTGATGCTCAAGTTGGACTCATGGTGTTCTCCAGCACTGGAAAGC TTTATGACTATGCAAGCACCAGCATGGAGTCAATCATTGAGCATTATAACAAACTAAAAGAGGACCATCCTCAACTAATG AGTTTTGCGTCAGAAATCAAGTTTTGGCAAAGAGAAGCGGCAAGCTTGAGGCAACAACTACAACATTTGCTTGAATGCCA CAGGCAATTGATGGGTCAAGAAGTTTCTGGTTTGGGTTTTAATGAGCTACGGCATCTAGAAAATCAACTGGAAATCAGCT TGAAGAACATTCGCATGAGAAAGGGTCAAATTTTTAGTGATGATATCAAAGATTTACACCAAAAGGGAAGCCTCAGTCAT CAAGAAAATGAAGAACTTTATAAGAAGATAGACCTCATCAATAAGGAAAATGCAGAACTCAGGAAGGTTATAGAAGCAAG GCATGGAGAAGAAGAAAATGCACCATCCATTAATCATTCATATACTATCAGCAATGGATCAGATATACTTGAGCCAATCA GTCTCCAGCTAAGGCAGCTACAACCCCAATACAATGAACCAGCAACCAAAACAATGAATCTGGGGTTGGCTTTTCATTTG TGA
Protein sequence (LotjaGi4g1v0041600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRGKIIIRRIDDTSSRQVTFSKRRKGLLKKARELSILCDAQVGLMVFSSTGKLYDYASTSMESIIEHYNKLKEDHPQLM SFASEIKFWQREAASLRQQLQHLLECHRQLMGQEVSGLGFNELRHLENQLEISLKNIRMRKGQIFSDDIKDLHQKGSLSH QENEELYKKIDLINKENAELRKVIEARHGEEENAPSINHSYTISNGSDILEPISLQLRQLQPQYNEPATKTMNLGLAFHL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 61 | 61 | 30.726 | ||
| SMART | 1 | 60 | 60 | 6.8E-38 | ||
| PANTHER | 2 | 201 | 200 | 6.5E-83 | – | |
| PANTHER | 2 | 201 | 200 | 6.5E-83 | – | |
| SUPERFAMILY | 2 | 86 | 85 | 5.23E-30 | ||
| CDD | 2 | 76 | 75 | 1.87039E-42 | ||
| ProSitePatterns | 3 | 57 | 55 | - | ||
| PRINTS | 3 | 23 | 21 | 1.8E-26 | ||
| Pfam | 10 | 57 | 48 | 3.5E-24 | ||
| Gene3D | 13 | 78 | 66 | 1.1E-28 | ||
| PRINTS | 23 | 38 | 16 | 1.8E-26 | ||
| PRINTS | 38 | 59 | 22 | 1.8E-26 | ||
| Coils | 79 | 106 | 28 | - | – | |
| Pfam | 85 | 170 | 86 | 5.9E-24 | ||
| ProSiteProfiles | 86 | 176 | 91 | 14.223 | ||
| Coils | 163 | 183 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA polymerase II regulatory region sequence-specific DNA binding | Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Positive regulation of transcription by RNA polymerase II | Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi4g1v0041600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…