Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0041800 |
| Transcript ID | LotjaGi4g1v0041800.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | heat shock protein; TAIR: AT5G09580.1 heat shock protein; Swiss-Prot: sp|Q4R3D6|ZMYM5_MACFA Zinc finger MYM-type protein 5; TrEMBL-Plants: tr|A0A0B2SHP9|A0A0B2SHP9_GLYSO Heat shock 70 kDa protein, mitochondrial; Found in the gene: LotjaGi4g1v0041800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4929088..4934077) extracted from Lotus japonicus Gifu genome v1.2.
TCCAGATGACCCTATTTAATTGGACACCACATAAACCCTAAACTAAACCCTGACTTCTCTCTTCTTCCCTCCGATCAGCC ATGGCCGCCGCCACCGCCTTGCTCCGATCCCTCCGCCGTCGCGACCTTGCCCCTTCTACTGTCTCTGCCTTCCGATCGGT ACATACATCACTACACTCTCTTTTGTTCCATTTACATCTTCAGTTTCATTCTATTCGAGATTGTATAATCACTTATGGGA AATAATGATGAAATAACTGATAATGCGTACTACTAGATCTTTGAATCAATATGTGTTGTATGCATTTTATAGGAGATATA ATCACTTTTCAGATTTTGAGCTGCTGATTGATTCTTTGGATCATGTAGTGGCTCAAATTCTTACTGGATTATTTGTGCAA TCGACTTAGTTGTTATGGGATGCTATTGCTTTTTTGGATTCAATTTAATCTGATTTTTCATGATTGAGAATTTCAGAATT TATTGTCTATTTGGGATTTATTAGTTATATGAATAACTGTGCAGCTTATGTAGAATTGTGATTGTTGGACTTGTGTCATA TGTGTGGTGAGACCGAGCATTATTCAGATGATAATTTCCACGTATAATTATAGAAAGATATATTAATTTGGTGCTTTCGG TCTCTCACTGAATTTGCTTTGTCTACAGTTTTGAAACATGATCCTATCAATGAAACAAAAGAATATTGAATTGAAATGAA ATGAAATGGTGTTTGTAAAATGGGGAATGAGAAACCTCACTCACTCCCTGTGCTTTCGGAGTGGGTGTAGGAGTTTGCGT TCTGATGCAGCGTTGGAAGCCATAGCCAAAGCTTCAGAAGACAAAGTTCCCAGTATAGTTCTCTACAATTACCCTTCATT TTCTGGAGCATTTTCCGCTCTCTTTGCTCACCTCTTCCACACTCGTCACAATCTCCCTTGCCTCATATTGCCCTTCTCTT CGGTCCCCTTTCTCGCTTTAAGGTTCATTTCTGACACCCCATCTACTTCAACTTCTTAAATTTCCTTGCTTTTTGTAATG GGGTGCTGTGTTTTTTGTCTTGGAGCATTTCAGGTCCTCATTCCTGTGCTTCACTTGATTTTGTGTTTGAAATTTTGTAA TGGGTGAAATGGGGTGATGGAAACTTGTTGTTTTTCAATGATACCTGGATATACTAATGTATTTGTTAAAACAGGGTTGA AGATTTGTGCATTGAAGGCCTTGAGACATGCTATCTACTTGACTTTCTTCCTCCAAAGGAATTCCTTTTTAAACTTTCCC ATCAATCAAAATGCAAGTAAGTTAATATTCATGTCCTACTATATTATTATCAATTTTTTTCTTCAGCTGCCCTTTATGTT GTTTGATGAATGATGATGATGTTATTTTGTTTCATTTCTCTTGTGGTTTTGATTGCATATTGATTTAATTATTATTATCT GTCTAAGGGTTATTGGGTTCGATCATCGGAAAGCAGTACTTAGACATATTCCCTCTGCCGGTGAGTGCCATGAGAATGTT GTGATTAATGTAAACCTTGAGAAGAGTAGCTCTAGTGCTGTTTATGAATACTTTGCAAGCAAACTCGAGGATACTAAAGT TTCTTCTGTAAGTAAGAATTTGAATTGTTGTATGTCTTCTAGTTCAATGGCTTCTGATATGATATGACAATGTCGTGAGA TAAAAAAAAATGCCTGAATTTTGTAAAGGGTGTGGTTCCAAGTTTGGTGGACTCAAAAGACAAAGGCCGTGTGGAGCTGA TGCTAAAGTATATTGAGGATGGGGATCTTCAGCGATGGAGCTTGCCTGGTATTAAGGCCTTTAACACCGGACTGCATGAA TGGCGGGAAAGGTTTAATTGTTTATCTAATCCATATATGTATAAGCAGGTATGAATGATTTTCTCTTAAACTAGTTTCTT TGTCTTATTATTGTTGTTGCTTAATGAAAATTTAGATTTTACTTAAATTCATATAAAAAAATGGATTAAGAAACAAGTTT ATGCATCGTTGTATCTATAGCATTTTCTTTTTTCTTGATAGTGTTTAGTTTACTAGAAGTCAAATAGCTTAAATAAGGAT TCATCTTAGAATGATTGTGTTTCGTTAGCAACTGTGGAGGGTAGAATTATTTGTTTTTGTAAGACAGCAACATGAGGTTG TAGAATTATTTGTTCGGTTCCAGATCGGGAAGAGAAAAAACCAATTTGATGGTTTAGTGGTTGTTTGAAGTGAGCATGAC TAATACAAATTCCTATTCTTTGTATTACACTTTCATACACTAATATTGCAACTCTTCAGGCCATAGCACCATCTATTTTG TTGCTTACTTGCATTTACATGTCTGAATATGTAATATTTCAAAAAGCAAAAACATTTGTCCTTACTATTTTATTGCTTAC TTGCATTTATATTGCAGTGGTTATTGCTGAATATCCTTTCCTTTACAAAATCTTCATTGCAGTTGCTGGAACTGAGCGCT GAAGAGTTAATTGCTAAAGGAAATTCATATTTTTCAGCTCGCCAGAATGCTGCAAGTAAATTGCTGCAAAAAGTTTTCAG GATTCGGCTTGGTAGAGGATTTTATGGAGAGTGCCTGGTAATATTTCAGATATATAACAATCTGAATTTGTATTTTTGTT AAATGCTATATATTTTTTACTAAGTACGTGTTTGGATTACCATTTTGAAATTTAATTTTTTGACACTTCGTGGGGAAGCT TTTGGTAAATAGATTCATAACCAAACATGCACTACAAGTTTGTTCTATTTTTACTTAAATAATTATGTATGAAATTCAAA TACTGCCAAGAACTTTCTCTGCTGCTTTTGTAGTGTTTAATTTATAACTAATTCTTGCCAGTTTGATTGATTTTAATCAC ATCATACAATTGTGATGTTGTGCCCCCACCCCTGATTTTTTGATTGAAATTTTCAATCAAGCTTTGTTGCCGTAAATGTT GATAGGGAGTCCGAGCAGATGGGAACCCTAACTTGAGTGATGAAATTGGCAAGCTTCTTAGTGCAAAAAGTGCTGCTGCT GGTCTGAGGTGGGTTGATTTATTTAGAAGAAATTTTTATTCACTTTATGTCTATCTTTGTTAGAAAAATGATGTTTCCTG AGGTTTTCTGACAGCAAGAAAAGTTCAATTAAAGCTTGACTATAACTCTTCAGATTTTCATGAGCATGGTGATTGGAATG ATAATTATATATGGAAGTTCTTGCCTGAACTACAAAGGCAGCAGTTTTTGTAATGATAGAAATATCATCTTGGGCAATGG GCTAGCAATATATTATGATCAAAAGCTCCATTGTGGCATAATGGCATTAGTGTAGGCTTTCTCATTTATATTCACCTGGT TTTTTGTCCCAAAAAACAAATAGCAAATTCTTATATCCAGGCCCTTAAATATAAAAGTCCTTAAAAGTGATATCCATTCC AGTGTCTCTGGTACATTACACTGAAATTTGTGAACACTGGATACCTGCTTTCCATTGAACTTGAGTCAGGATCTTGGGTT AGTGCTTCATTAAGAAGAACGCAGGTGGTTAATACTTATCACTTGCAGCATGTTAACTTTTCCTGTCATATTAATGTGAA ATTCAATGGACATACTTATATGGAGACTTTATTATCTTGAAAATAAGCATTTGGAGCTTGATTATTGCTCGGACCCTGTT AGATCCTATGTTGGTTCCAAATATTCATCGATTTTTCCTCTGATAGTAACTGTTGGAAGATTCCCAGTATCTTTATTTGA TTCAGGTTCTTAGGGGTTAAGTGAAGAATCTCAACAATGTTCTTTTAACAAGCATCTTATTGATATGATTGCTTGCCGCC ACCATAACCTATTTTTAAGTTGTATTGAAGAATTTTTACTTATATAACCTGATCCATTAGATGTATTCATCATTGACAGG CCCATAGGTGCTGTGATATTCATGCAACGGAATAATCTCAAAATGTGCTTGCGCAGCACTGATAGTGCCACTGATACCTC TGAAGTTGCAAAGGTGTGCCTTGCTTGGTTCTATGTTCTTTTTCTTATCTTTTGATTGTTTAATATTTGGACACACTTTA ATGAGTTCTCTTCTCTGGGAACTGGAAGGCATATGGCGGAGGAGGTTCTCCAAGTTCAAGCTCCTTCATAATAAGAATGG ACGAGTATAATCAATGGATTTCAATGAAGTCATCATGACGATTTCTTGGTTTGAATAACTAATCCTGGCCTTTTCTTTAA TATTTATGGTAGTGTATCTTATTCTATTACTAGACAAGCTTTCGCATCCTCAAATTTCATGTTGAGATTTGAGACTGTAT AATTAGTATTTTTTTGTGGTAATAATACTAGATTATAGAATTGTGTGAATGGCCACATTTTTGTTTTAATTTTTTACCAA CCTAGAATGGTTTCTTTTGGAGCAAATGTTCTTGACGAGTTATTGATTTCAATTTTTTTCTTGTTGTCATATTCTACGTC ATGGAGATTGTGTGCCTATGTGCTGTCACACAAACAAGATGATTTGATAAATTTACACACTACCTTTAGAGATTTGAAAT CATCAAAGTTACAATGTAATGGCTTGCTAAGGAAGAGACAGATGATGTGATGACTGTAGAACCCTTGCATTCTCGATTGG ATGTCCAAGATGATGGCTGTGTTATCATGTCGTGTAGACTTTGCTGCCTGATACTGATGCAGCACATAATGAGGTGGGTG GGAGAATGAAAGTAGAGCTTGAGCAAGAAGGAAGCATTTATATTGGAAGTAAACAAGCCATTATTGAGGTTGGCTTCAAG GACAAAGAAGTGGAATGTAATATTCCAATTGAGAAGAAAAACATTTCTGATGCTGCCATTGTTTCTTACAGTCAGCTGTG GCAAACTTTACAGCTTTTAGTTGGATTTTCCTCCACCATTGTTTTGTGCATTATTTTATCATTTTCATCCAGTACCTGAA AATAACAATATTTAAGTAGGATTATATAAT
CDS sequence (LotjaGi4g1v0041800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGTTTGTAAAATGGGGAATGAGAAACCTCACTCACTCCCTGTGCTTTCGGAGTGGGTGTAGGAGTTTGCGTTCTGA TGCAGCGTTGGAAGCCATAGCCAAAGCTTCAGAAGACAAAGTTCCCAGTATAGTTCTCTACAATTACCCTTCATTTTCTG GAGCATTTTCCGCTCTCTTTGCTCACCTCTTCCACACTCGTCACAATCTCCCTTGCCTCATATTGCCCTTCTCTTCGGTC CCCTTTCTCGCTTTAAGGGTTGAAGATTTGTGCATTGAAGGCCTTGAGACATGCTATCTACTTGACTTTCTTCCTCCAAA GGAATTCCTTTTTAAACTTTCCCATCAATCAAAATGCAAGGTTATTGGGTTCGATCATCGGAAAGCAGTACTTAGACATA TTCCCTCTGCCGGTGAGTGCCATGAGAATGTTGTGATTAATGTAAACCTTGAGAAGAGTAGCTCTAGTGCTGTTTATGAA TACTTTGCAAGCAAACTCGAGGATACTAAAGTTTCTTCTGGTGTGGTTCCAAGTTTGGTGGACTCAAAAGACAAAGGCCG TGTGGAGCTGATGCTAAAGTATATTGAGGATGGGGATCTTCAGCGATGGAGCTTGCCTGGTATTAAGGCCTTTAACACCG GACTGCATGAATGGCGGGAAAGGTTTAATTGTTTATCTAATCCATATATGTATAAGCAGTTGCTGGAACTGAGCGCTGAA GAGTTAATTGCTAAAGGAAATTCATATTTTTCAGCTCGCCAGAATGCTGCAAGTAAATTGCTGCAAAAAGTTTTCAGGAT TCGGCTTGGTAGAGGATTTTATGGAGAGTGCCTGGGAGTCCGAGCAGATGGGAACCCTAACTTGAGTGATGAAATTGGCA AGCTTCTTAGTGCAAAAAGTGCTGCTGCTGGTCTGAGGCCCATAGGTGCTGTGATATTCATGCAACGGAATAATCTCAAA ATGTGCTTGCGCAGCACTGATAGTGCCACTGATACCTCTGAAGTTGCAAAGGCATATGGCGGAGGAGGTTCTCCAAGTTC AAGCTCCTTCATAATAAGAATGGACGAGTATAATCAATGGATTTCAATGAAGTCATCATGA
Protein sequence (LotjaGi4g1v0041800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVFVKWGMRNLTHSLCFRSGCRSLRSDAALEAIAKASEDKVPSIVLYNYPSFSGAFSALFAHLFHTRHNLPCLILPFSSV PFLALRVEDLCIEGLETCYLLDFLPPKEFLFKLSHQSKCKVIGFDHRKAVLRHIPSAGECHENVVINVNLEKSSSSAVYE YFASKLEDTKVSSGVVPSLVDSKDKGRVELMLKYIEDGDLQRWSLPGIKAFNTGLHEWRERFNCLSNPYMYKQLLELSAE ELIAKGNSYFSARQNAASKLLQKVFRIRLGRGFYGECLGVRADGNPNLSDEIGKLLSAKSAAAGLRPIGAVIFMQRNNLK MCLRSTDSATDTSEVAKAYGGGGSPSSSSFIIRMDEYNQWISMKSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 365 | 362 | 1.1E-177 | – | |
| PANTHER | 4 | 365 | 362 | 1.1E-177 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0041800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…