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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0041800 |
| Transcript ID | LotjaGi4g1v0041800.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Elongation factor 2; TAIR: AT5G09580.1 heat shock protein; Swiss-Prot: sp|Q54M18|ARG56_DICDI Bifunctional protein argC, mitochondrial; TrEMBL-Plants: tr|A0A0B2SHP9|A0A0B2SHP9_GLYSO Heat shock 70 kDa protein, mitochondrial; Found in the gene: LotjaGi4g1v0041800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4929953..4934069) extracted from Lotus japonicus Gifu genome v1.2.
CAATTACCCTTCATTTTCTGGAGCATTTTCCGCTCTCTTTGCTCACCTCTTCCACACTCGTCACAATCTCCCTTGCCTCA TATTGCCCTTCTCTTCGGTCCCCTTTCTCGCTTTAAGGTTCATTTCTGACACCCCATCTACTTCAACTTCTTAAATTTCC TTGCTTTTTGTAATGGGGTGCTGTGTTTTTTGTCTTGGAGCATTTCAGGTCCTCATTCCTGTGCTTCACTTGATTTTGTG TTTGAAATTTTGTAATGGGTGAAATGGGGTGATGGAAACTTGTTGTTTTTCAATGATACCTGGATATACTAATGTATTTG TTAAAACAGGGTTGAAGATTTGTGCATTGAAGGCCTTGAGACATGCTATCTACTTGACTTTCTTCCTCCAAAGGAATTCC TTTTTAAACTTTCCCATCAATCAAAATGCAAGTAAGTTAATATTCATGTCCTACTATATTATTATCAATTTTTTTCTTCA GCTGCCCTTTATGTTGTTTGATGAATGATGATGATGTTATTTTGTTTCATTTCTCTTGTGGTTTTGATTGCATATTGATT TAATTATTATTATCTGTCTAAGGGTTATTGGGTTCGATCATCGGAAAGCAGTACTTAGACATATTCCCTCTGCCGGTGAG TGCCATGAGAATGTTGTGATTAATGTAAACCTTGAGAAGAGTAGCTCTAGTGCTGTTTATGAATACTTTGCAAGCAAACT CGAGGATACTAAAGTTTCTTCTGTAAGTAAGAATTTGAATTGTTGTATGTCTTCTAGTTCAATGGCTTCTGATATGATAT GACAATGTCGTGAGATAAAAAAAAATGCCTGAATTTTGTAAAGGGTGTGGTTCCAAGTTTGGTGGACTCAAAAGACAAAG GCCGTGTGGAGCTGATGCTAAAGTATATTGAGGATGGGGATCTTCAGCGATGGAGCTTGCCTGGTATTAAGGCCTTTAAC ACCGGACTGCATGAATGGCGGGAAAGGTTTAATTGTTTATCTAATCCATATATGTATAAGCAGGTATGAATGATTTTCTC TTAAACTAGTTTCTTTGTCTTATTATTGTTGTTGCTTAATGAAAATTTAGATTTTACTTAAATTCATATAAAAAAATGGA TTAAGAAACAAGTTTATGCATCGTTGTATCTATAGCATTTTCTTTTTTCTTGATAGTGTTTAGTTTACTAGAAGTCAAAT AGCTTAAATAAGGATTCATCTTAGAATGATTGTGTTTCGTTAGCAACTGTGGAGGGTAGAATTATTTGTTTTTGTAAGAC AGCAACATGAGGTTGTAGAATTATTTGTTCGGTTCCAGATCGGGAAGAGAAAAAACCAATTTGATGGTTTAGTGGTTGTT TGAAGTGAGCATGACTAATACAAATTCCTATTCTTTGTATTACACTTTCATACACTAATATTGCAACTCTTCAGGCCATA GCACCATCTATTTTGTTGCTTACTTGCATTTACATGTCTGAATATGTAATATTTCAAAAAGCAAAAACATTTGTCCTTAC TATTTTATTGCTTACTTGCATTTATATTGCAGTGGTTATTGCTGAATATCCTTTCCTTTACAAAATCTTCATTGCAGTTG CTGGAACTGAGCGCTGAAGAGTTAATTGCTAAAGGAAATTCATATTTTTCAGCTCGCCAGAATGCTGCAAGTAAATTGCT GCAAAAAGTTTTCAGGATTCGGCTTGGTAGAGGATTTTATGGAGAGTGCCTGGTAATATTTCAGATATATAACAATCTGA ATTTGTATTTTTGTTAAATGCTATATATTTTTTACTAAGTACGTGTTTGGATTACCATTTTGAAATTTAATTTTTTGACA CTTCGTGGGGAAGCTTTTGGTAAATAGATTCATAACCAAACATGCACTACAAGTTTGTTCTATTTTTACTTAAATAATTA TGTATGAAATTCAAATACTGCCAAGAACTTTCTCTGCTGCTTTTGTAGTGTTTAATTTATAACTAATTCTTGCCAGTTTG ATTGATTTTAATCACATCATACAATTGTGATGTTGTGCCCCCACCCCTGATTTTTTGATTGAAATTTTCAATCAAGCTTT GTTGCCGTAAATGTTGATAGGGAGTCCGAGCAGATGGGAACCCTAACTTGAGTGATGAAATTGGCAAGCTTCTTAGTGCA AAAAGTGCTGCTGCTGGTCTGAGGTGGGTTGATTTATTTAGAAGAAATTTTTATTCACTTTATGTCTATCTTTGTTAGAA AAATGATGTTTCCTGAGGTTTTCTGACAGCAAGAAAAGTTCAATTAAAGCTTGACTATAACTCTTCAGATTTTCATGAGC ATGGTGATTGGAATGATAATTATATATGGAAGTTCTTGCCTGAACTACAAAGGCAGCAGTTTTTGTAATGATAGAAATAT CATCTTGGGCAATGGGCTAGCAATATATTATGATCAAAAGCTCCATTGTGGCATAATGGCATTAGTGTAGGCTTTCTCAT TTATATTCACCTGGTTTTTTGTCCCAAAAAACAAATAGCAAATTCTTATATCCAGGCCCTTAAATATAAAAGTCCTTAAA AGTGATATCCATTCCAGTGTCTCTGGTACATTACACTGAAATTTGTGAACACTGGATACCTGCTTTCCATTGAACTTGAG TCAGGATCTTGGGTTAGTGCTTCATTAAGAAGAACGCAGGTGGTTAATACTTATCACTTGCAGCATGTTAACTTTTCCTG TCATATTAATGTGAAATTCAATGGACATACTTATATGGAGACTTTATTATCTTGAAAATAAGCATTTGGAGCTTGATTAT TGCTCGGACCCTGTTAGATCCTATGTTGGTTCCAAATATTCATCGATTTTTCCTCTGATAGTAACTGTTGGAAGATTCCC AGTATCTTTATTTGATTCAGGTTCTTAGGGGTTAAGTGAAGAATCTCAACAATGTTCTTTTAACAAGCATCTTATTGATA TGATTGCTTGCCGCCACCATAACCTATTTTTAAGTTGTATTGAAGAATTTTTACTTATATAACCTGATCCATTAGATGTA TTCATCATTGACAGGCCCATAGGTGCTGTGATATTCATGCAACGGAATAATCTCAAAATGTGCTTGCGCAGCACTGATAG TGCCACTGATACCTCTGAAGTTGCAAAGGTGTGCCTTGCTTGGTTCTATGTTCTTTTTCTTATCTTTTGATTGTTTAATA TTTGGACACACTTTAATGAGTTCTCTTCTCTGGGAACTGGAAGGCATATGGCGGAGGAGGTTCTCCAAGTTCAAGCTCCT TCATAATAAGAATGGACGAGTATAATCAATGGATTTCAATGAAGTCATCATGACGATTTCTTGGTTTGAATAACTAATCC TGGCCTTTTCTTTAATATTTATGGTAGTGTATCTTATTCTATTACTAGACAAGCTTTCGCATCCTCAAATTTCATGTTGA GATTTGAGACTGTATAATTAGTATTTTTTTGTGGTAATAATACTAGATTATAGAATTGTGTGAATGGCCACATTTTTGTT TTAATTTTTTACCAACCTAGAATGGTTTCTTTTGGAGCAAATGTTCTTGACGAGTTATTGATTTCAATTTTTTTCTTGTT GTCATATTCTACGTCATGGAGATTGTGTGCCTATGTGCTGTCACACAAACAAGATGATTTGATAAATTTACACACTACCT TTAGAGATTTGAAATCATCAAAGTTACAATGTAATGGCTTGCTAAGGAAGAGACAGATGATGTGATGACTGTAGAACCCT TGCATTCTCGATTGGATGTCCAAGATGATGGCTGTGTTATCATGTCGTGTAGACTTTGCTGCCTGATACTGATGCAGCAC ATAATGAGGTGGGTGGGAGAATGAAAGTAGAGCTTGAGCAAGAAGGAAGCATTTATATTGGAAGTAAACAAGCCATTATT GAGGTTGGCTTCAAGGACAAAGAAGTGGAATGTAATATTCCAATTGAGAAGAAAAACATTTCTGATGCTGCCATTGTTTC TTACAGTCAGCTGTGGCAAACTTTACAGCTTTTAGTTGGATTTTCCTCCACCATTGTTTTGTGCATTATTTTATCATTTT CATCCAGTACCTGAAAATAACAATATTTAAGTAGGAT
CDS sequence (LotjaGi4g1v0041800.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTAAAGTATATTGAGGATGGGGATCTTCAGCGATGGAGCTTGCCTGGTATTAAGGCCTTTAACACCGGACTGCATGA ATGGCGGGAAAGGTTTAATTGTTTATCTAATCCATATATGTATAAGCAGTTGCTGGAACTGAGCGCTGAAGAGTTAATTG CTAAAGGAAATTCATATTTTTCAGCTCGCCAGAATGCTGCAAGTAAATTGCTGCAAAAAGTTTTCAGGATTCGGCTTGGT AGAGGATTTTATGGAGAGTGCCTGGGAGTCCGAGCAGATGGGAACCCTAACTTGAGTGATGAAATTGGCAAGCTTCTTAG TGCAAAAAGTGCTGCTGCTGGTCTGAGGCCCATAGGTGCTGTGATATTCATGCAACGGAATAATCTCAAAATGTGCTTGC GCAGCACTGATAGTGCCACTGATACCTCTGAAGTTGCAAAGGCATATGGCGGAGGAGGTTCTCCAAGTTCAAGCTCCTTC ATAATAAGAATGGACGAGTATAATCAATGGATTTCAATGAAGTCATCATGA
Protein sequence (LotjaGi4g1v0041800.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLKYIEDGDLQRWSLPGIKAFNTGLHEWRERFNCLSNPYMYKQLLELSAEELIAKGNSYFSARQNAASKLLQKVFRIRLG RGFYGECLGVRADGNPNLSDEIGKLLSAKSAAAGLRPIGAVIFMQRNNLKMCLRSTDSATDTSEVAKAYGGGGSPSSSSF IIRMDEYNQWISMKSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 175 | 175 | 8.7E-103 | – | |
| PANTHER | 1 | 175 | 175 | 8.7E-103 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0041800.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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