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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0042900 |
| Transcript ID | LotjaGi4g1v0042900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | L-galactose dehydrogenase; TAIR: AT4G33670.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|O81884|GALDH_ARATH L-galactose dehydrogenase; TrEMBL-Plants: tr|G7JTZ5|G7JTZ5_MEDTR Aldo/keto reductase family oxidoreductase; Found in the gene: LotjaGi4g1v0042900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:5074240..5078213) extracted from Lotus japonicus Gifu genome v1.2.
TAATCATCATCATCATCATATATCCAAAGAAGATGTAAGAAAACAAAACCCAACAAACAAACAAACCAGAAAAATGGAGC TTCGTGAACTCGGAAGAACCGGACTGAAGCTCAGCACAGTCGGGTTCGGAGCCTCCCCTCTCGGCAACGTCTTCGGCACC GTCCCCGAAGAACAAGCCATCGCCTCCGTTCGCTTCGCCTTCCAATCCGGCATCAACTTCTTCGACACTTCACCGTAACT CAAACTTCATCATCACTTCCTCATTTCTCTCGTTTTCAATTTTCTGATACAAATTTTGATTCATTCGTTTTTCCATTTGA AGATTCTACGGTGGAACACTATCAGAAACAGTGCTGGGAAAAGCACTGAAAGCGTTGAATGTTCCGCGAAGCGATTACAT TGTAGCAACGAAATGCGGAAGGTACAAAGAGGGGTTCGATTTCAGCGCAGAAAGGGTCACCAAAAGTGTCGAAGAAAGCT TGGAGAGGTTGCAGCTTGATTATGTTGACATTCTTCAATGCCATGACATTGAATTCGGATCGTTGAACCAGGTTTGAACT TTGAAGTTTGAAATCAGAAATGTTATGCATTTTTCTCTATTTCATTGTTATTGTTAGAGTCCCACATTGGCTAGAGATAT GGTCAATCAAGTGCTTATAAAGGGTAGAACAACCCTCAACTCTGGAGCTAGCTTTTGGCTTGAGTTAGGTTTCCCTAATT CTAATAGTTATTGTTGAATTTGCGAAACCCTAAATGACGGTAACTCATTGTTGTTTAGATTGTTGAGGAGACGATTCCGG CGCTGCAGAAATTGAAGGAAGCTGGGAAGACTAGGTTCATTGGCATTACTGGGCTTCCTTTGGAGATTTACAGTTATGTG CTGGATAGGGTTCCGCCGGGAACCCTGGATGTGGTGTTGTCGTATTGTCATCATTGTATAAACGACACGACGTTGGAGGA TTTAGTGCCGTATCTGAAGTCCAAAGGTGTTGGTGTTATCAATGCTTCTCCTCTGGCAATGGGCCTGCTAACTGAGGCTG GGCCTCCCGAGTGGCATCCGGCTTCGGCAGAACTCAAGGTGGTTTACCTGTCTAGTCAATATTTTTCGCGTAAAAGTCAA TTAAATAAGAACTGATTCTGTTATTATGTGCCTGCAATTATTTTAGATGTAGTTTGATTTCGTATTAGGTAGCAAACATG AATCAATAACCTTAGTTTAGAAGTTATGATTTCTGTTTGTTTACTTATGGAGTGGTAGTTCATATTTCATCAAATCTAAA TTGCTTTTGCTTTTATGTGTTTTGTGTTGAGAGTTTTGACATTGATTAGAGATATTGCTGAATAGGTTTATAGATAGGGT AGAGAGTTTTAAGCCTAATCTGAATTTTAAGATGTTTTGGAAATTTGCAGTCTGCGTGTCAAGCTGCTGCAACCCATTGT AAAGAGAAGGGAAAGAACATTTCAAAGTTAGCACTGCAGTACAGCTTGGTAAATAAGGATATCACATCGGTGCTTGTTGG CATGAGATCTGTTGAACAGGTTCTGTTTCATAATCTTCCTGAATTGGCATATTTGATTTATATGTCTAATATATGCTCTG ATAAATCTATTATCTGGTCGATAATGCATGAACCTCTGTCCTTTATTGTTTTCATTGTGTCACTTTTTTTTTGGAAAGCT TCATTGTGTCACTTGATCAATCAAATAGTTACCTCTTTCCTTTATTGTTTTCATTGAAGCATGTATGAGCATTTTCCTTG GTTAAATATGTGTATGTTGCTCCTTCTGTTTTTTCATGCATATTAATTTAACAAAGGAGCAGTAACAAGCATAAAAAAAG GTATGTGGTATATGCTAATGCAATGTTTGTTGATCTGAGGCCATAAGTTAGTGCACAGCACACTGTCATTAAATTAATTA CAAACTACAAAGAAGATTTCTAGGCTCTAATTGATGGTAGTACTCTGAAGTTTTTCTGTATGTTTTTTTACTGTTGCTTG CAGCACTCTTGTTAATGTGATTATATGTCTGTATTATCATGTAAGACCACATTGTCTATCTTTGTGTATTGATGTACTTC ATAGAAGGCCTTTAAACTTTAAAGACTTGATTTTTCTAAGCTATGTAAACTGAAGTTTTATTAATATCCTGTACGTAGCT ATTCCTACACCAAAAGATCCGGGGTGTTAACATGCAACCATGTTGACTATGAACCTATACTGTGTTCCAGCTTTTTCTTT CATAGTTTAAGTTTCAAGAGAAAGTAAGTTATTTGTTGATGGCCAGTCAGATATAGATGTCTTCTGTTTCTTCTCTATTA ATTTAGGTTGGGACGAAGGGTATTTAGAATTCTTATGTTTATAAACATGGGTTAGGGTGATAATAGATGGCTAAAGATAC TCCCCCCCCACCCCCCCACTTTCCTTTTTTGTCCCTTTATATTGTTTGTATGGCATGGACATGATGTAGCACATATTAAT ATCCAGTAAAGTTAGATGAACTCTTTTGGATTTTTCTCGCAACATCAGCAAATTTTCTATAAACTATTTTTGGTGCCTGC CTGGTGGGTGGATAAAGTGAAGTGTCCAAAGAAAATCTAGAACAAAAAGTTTTGTAGCAGTTAGAACTGAAAGTATACGG TTAGCATGTAAAAGATATTTATAGCAAGGACCTCTCACATAGTTATGAAATTCACTGCCGCTAAATAAATGGTTTTTCAT CTTTTTGAGCTATCCAAGTTATGAGTAAACTCTTTTGCTTTTGCTTGAGATAGAAAATATGAACACCTTCTTGACATTTG TATGCATTGGCTTTCAAAATTTGTGTTATATAGTCATCAGAACATTTTTTTAACATTTCATAAGCAGCAGAAGTTTGTTA CACTCAAATGATTTGCATTAGTTCTGCTATTCATGCTTTATCATCAATGCGCAAAAACAAATGTAACGCCTTCCGAGTAA ACATGGTTGTACACTTTTATCTTGCTCACTCAGTCCAACAGAAGTTTGAAACATGGAACCTTCCTTCCATAGACCTAGTG CACCCCAGTATTATAACAGTTGTACACTTTTATCTCACTCACTCTTTCCAACAGAACTTTAAAAAGTGGAAACTTCCTTC CATAAAGCTATTGCACCCCAGTATTATTGGCACATTATTAATCAATGATTGACTATCACAGTTAATTAATAATTAACTGC TCTAACTAGTGTGTTAATACATTATTGGCTTAGTGTACCCATACTGGGTGCGCTAGGCTTATGCAAGAATTTCTCATATC TCAAATTTGTGGCATGGATCAATCACTGAATAAGGATTATCAGTTCTAAATTGAGTTGTTGTTACAAATTAGGTGGAGGA AAATGTTGCTGCCGCAAGGGAACTTGCAGCTTCTGGAATAGATGAAGAGACTCTATCAGAAGTTGAAAACATTCTAAAGC CTGTTAAAAATCAGTCATGGCCTAGTGGAATCCAGCAGAGCTGACTTTTTTAATTCTACTGCTTTGTATTCCTTATGAAG GAATGCAGTGTGCCCATTTCTGTTAAGAATGTTCTTTACTCAATAAGAGAAGTTACTCTCGAAGCTATTAAGATCTACTA TCCAATTTTATTTTGCTTATCTTGTAGGGTGCATTCAATAAATTTCTTACTCAGTGAAGTTTCAATGTGATAATCTCCAG CTACGTGAGAGACTAAGGGCTCACTAATATTTAACTTTCTCAAAGTTCTGATGTTTATATGAATAAAACTGGAGTCATTG ATTGAATCCATCCATCGAGGTATAATTTAGGTTTTATATCTGTTTATAAATTCCTTGAAATATCACATTATTTAGGAATT AGTTCCTCTTTAATAGCTCAAATAGTAAGAGTTAGGCGACATATGGGTTGGGAGGGGGAGGTCTAGGGATCAATTCCTGG AGGGTGCAATTTATCTTTCCGATTTAGAAAAAAAAAGTATTTTAGCTCTTTAGC
CDS sequence (LotjaGi4g1v0042900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCTTCGTGAACTCGGAAGAACCGGACTGAAGCTCAGCACAGTCGGGTTCGGAGCCTCCCCTCTCGGCAACGTCTT CGGCACCGTCCCCGAAGAACAAGCCATCGCCTCCGTTCGCTTCGCCTTCCAATCCGGCATCAACTTCTTCGACACTTCAC CATTCTACGGTGGAACACTATCAGAAACAGTGCTGGGAAAAGCACTGAAAGCGTTGAATGTTCCGCGAAGCGATTACATT GTAGCAACGAAATGCGGAAGGTACAAAGAGGGGTTCGATTTCAGCGCAGAAAGGGTCACCAAAAGTGTCGAAGAAAGCTT GGAGAGGTTGCAGCTTGATTATGTTGACATTCTTCAATGCCATGACATTGAATTCGGATCGTTGAACCAGATTGTTGAGG AGACGATTCCGGCGCTGCAGAAATTGAAGGAAGCTGGGAAGACTAGGTTCATTGGCATTACTGGGCTTCCTTTGGAGATT TACAGTTATGTGCTGGATAGGGTTCCGCCGGGAACCCTGGATGTGGTGTTGTCGTATTGTCATCATTGTATAAACGACAC GACGTTGGAGGATTTAGTGCCGTATCTGAAGTCCAAAGGTGTTGGTGTTATCAATGCTTCTCCTCTGGCAATGGGCCTGC TAACTGAGGCTGGGCCTCCCGAGTGGCATCCGGCTTCGGCAGAACTCAAGTCTGCGTGTCAAGCTGCTGCAACCCATTGT AAAGAGAAGGGAAAGAACATTTCAAAGTTAGCACTGCAGTACAGCTTGGTAAATAAGGATATCACATCGGTGCTTGTTGG CATGAGATCTGTTGAACAGGTGGAGGAAAATGTTGCTGCCGCAAGGGAACTTGCAGCTTCTGGAATAGATGAAGAGACTC TATCAGAAGTTGAAAACATTCTAAAGCCTGTTAAAAATCAGTCATGGCCTAGTGGAATCCAGCAGAGCTGA
Protein sequence (LotjaGi4g1v0042900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELRELGRTGLKLSTVGFGASPLGNVFGTVPEEQAIASVRFAFQSGINFFDTSPFYGGTLSETVLGKALKALNVPRSDYI VATKCGRYKEGFDFSAERVTKSVEESLERLQLDYVDILQCHDIEFGSLNQIVEETIPALQKLKEAGKTRFIGITGLPLEI YSYVLDRVPPGTLDVVLSYCHHCINDTTLEDLVPYLKSKGVGVINASPLAMGLLTEAGPPEWHPASAELKSACQAAATHC KEKGKNISKLALQYSLVNKDITSVLVGMRSVEQVEENVAAARELAASGIDEETLSEVENILKPVKNQSWPSGIQQS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 315 | 315 | 1.7E-135 | – | |
| Gene3D | 1 | 301 | 301 | 4.6E-75 | ||
| SUPERFAMILY | 1 | 303 | 303 | 1.44E-71 | ||
| CDD | 4 | 300 | 297 | 1.6543E-90 | ||
| Pfam | 16 | 283 | 268 | 1.8E-59 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0042900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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