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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0045500 |
| Transcript ID | LotjaGi4g1v0045500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphosulfolactate synthase; TAIR: AT4G21320.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|Q8GWL1|HSA32_ARATH Protein HEAT-STRESS-ASSOCIATED 32; TrEMBL-Plants: tr|A0A072UN08|A0A072UN08_MEDTR (2R)-phospho-3-sulfolactate synthase ComA; Found in the gene: LotjaGi4g1v0045500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:5356817..5360033) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGCAAACACTTGTTGCATTACAACATTCTGGAATAGTTGGCGCTTTCTAGAACGAACTCCATCCTTCTCTGTTCTAC GAGAACACAAACCAACTCTGTCATTTCTAAAACGCAACAACGCTTTTCAATTCATTCTTCTCAGTTCTCAGTTCTCAGTT CTCACTCACTCACCCAAAAATGGCAGCATATCCATGGAAAACCTTCGACGAGAACGAAGATCGCCCCTCCAAGCCTCGCC GCTTCGGCCTCACCGAGATGCGAAGCCCCCATTACTCTCTCTTCAGCCACAACGTTCTTCAGGTAACCGTAACCACCCCA CCATTTTCATCAGTTTTCTATGGATTTGACCCTTTGTTTGTGTATTTTTATGTATATATGTGTGTTGTGTTTTGTGCAGG ATATATTTGAATCTATGGGGGAATATGTAGATGGGTTGAAATTTTCAGGGGGGTCTCACAGTTTGATTCCTAAGCCTTTC ATCAAACAGGTCATAGACATGGCTCATCAGCATGATGTGTATGTTAGTACAGGTGATTGGGCTGAACACTTGATTCGCAA AGCTCCTTCAGGTTTCAATGACTATGTTGAGGTAATTTGGTCAAATCATCATCATCACCGTCATGATCATCATTGTTTTG TGATTAGTTTTTGTTCTTGTTGCTAGATGAGTAGGTCTGAAATCAACATGGTTTTGGTTTTTTTATCTTGTGGCAGGAAT GCAAGAAGTTGGGGTTTGACACAATTGAGCTGAATGCGGGTTCACTTGGAGTTCCTGAGGAAACCCTTTTGAGATTTGTT CGCTTGGTTAAAAGTGGTGGCATGAAAGCTAAGCCTCATTTTGAAGTGAAGTTTAACAAGTCTGATATGCCTAAAGGTGG TGATAGGGCTTATGGGGCTTATATTCCCCCAGCACCTAGATCATCCGGTAAGGATACTTAACTCGCTCTCAAGTTCGATC ACTCTAGATCTCTTTAAGGTGGAACTCAATCCCTAATCCCAAGCATAAGCATATTTAGGCTTTTTGACAGATACTGTCTT CTGCATTTGATTAATAAAATATAAAACTAGTAACATGTGATGGTAGAAGAATTGACAGCCATGTATGATTAATCATGTGG CGTCATTTTAAGTTGTAGTATGCAGTTGCAATTGTGGCCGCGATTTTGCAATGTGACAATTTCCGGCAACCATATTGTGA TTGCGATTGCAGCTGTATTTATCCGCAATTTCTCATAATTTCAAGCAATATGATGTAGTCGCTGCAATTTTTAAACCATG GTCCTTGGTGGAGGACATAGATTGATAATATGTTCTTCTTTCCAATGAGTACTACCGTGCTGACATGATTTTCATGAATG ATGTGAAAGGATTCAGTATTCACCTATATGCAAAATATGAACAATGTCCCTCATCTTTGACAAAACTGGTTCCTAGGCCA TGATAAGTAATAGTTGAATAATGTGCTAGGGGTAGGTTTCTGTCTTGAGGGAATGGCAGTGCAGGTAATTTTGATCAAGG GGTTAAATCGTATCCCGAAGCTTGGTTTCTACTGAAATATAGATTGTGTAATGGGAACTTGTTTAGATGCATGTTCGAGT CCCATTTATACTATTTATCAGTTTTTTATGTTTCTTCTATTTAATTACCTTTTTTTCAATTCATTTTGGAGGATGTTCTG TACCCTGTAGTTAAATACTAAATGTTTTTACTTATCACGATAATATAATTTAAAGAATGCTACTCTCTGTATCTTCTTGC CGTATGATCTTTCCTTTTCTAATTGTGTGTAGAAGCATGAAGTTTTGAAGTTCAGAAGTAACATTTCATCAAAACAAAGG AATGCCTAAAGGATTTTTGGTTTTGATTTGGATGAATCGCATAGTCAGATGAATGACGTAGAAGATATGCCTATTGTGGA TTCTTCACCTTTATTCCTTCAAATAGATCTGCTTAAAATTTATGTAGAATCAAATGGTTAGAGGTGAGGATAGGGGTTCA ATACACCAATTGTTGAGGATCAGAGAATGAGCCTGGCAAGAAATAGACAAAGTGAACTAGGCATCACACATGTTCGTCCG AAATCTTAATACTTTATGTTTCTGTTCTATTATTTTATTATATTCTTAAACCAACATGAGATTTTAAATTCACATTTGAA TTTCCAACAACACCTATAATCGATGCTTGAACTACTTTAAGATGCTCATGTTTTCTGCTCTGAATGGTGCTTAAGAAATA CTAAGGCATTACTTACTGGTACTTAAAGTTTCAAATCTTTTCAACTAAAGGTGGATTGTCAAGGAAATATGTAGAATCAA CATAACACATGGTTTGATCTGTTTTGAAACTGTTGCTGCAGAACTAGTTGAAGATGTGGATCTCTTGATCAGAAGGGCTG AGAGATGTTTGGAAGCAGGTGCAGATATGATACTGATTGATGCTGATGATGTCTGCAAACAAGCTGATCATATGCGTGCG GATATTATCGCGAAGATCATAGGGCGCCTTGGTATTGAGAAGACTATGTTTGAAGCATCAAATCAGAAAGCATCTGAGTG GTTTATCAAACAATATGGTCCAAAGGTAAATGTTTCATCTCCCTTCATACCCAATAAGAATAAGAAACCTATCTTACAGC TTTGTTGATATTATGCATCATTGTTCAGGTGAACCTTTTCATTGATCACTCGCACTTGGTGGATGTGGAGTGCCTCAGGG GACGCAACTTAGGCCGAAACAATGCTTCGGTCCTCGGTTCTTCATATTACCTGCTCTGAAGTGATCGGATTTTGTAGAGC ACCCTGTGGGATTGGCTTGTTCATGTGAAAGTCTTGTGCTGTGTATGACAGTGTGTGTTACTTTTTCCTTCAATGGGAAA TAGAGAACATTTAAATGGGGAGATTGTAATAACTAATAAGTCAATGTAATATGATTTAGTCGCTTTGGTAAATTTGTCCG GGATATTCAGAACCATTAGCAATTCATAAAGCATGCAAAAGAAACCATAACAGGCTCGGAATCGGTAAACTCAATGTCCA TCACTGAAAAATTTAATATCTGTTTTGTGTTGAACTTAACAGTGGATTCACCTTGAAGTCAACATGTTAAAATTTCTCTA ATCCATATTAAATTTAATATGGTAAATTTTTTAATTTTCCCGTTTGTCAGCATCCAATTTTGTTTCAGGTATTTTCATGT AACTTCAATTTTTTATA
CDS sequence (LotjaGi4g1v0045500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGCATATCCATGGAAAACCTTCGACGAGAACGAAGATCGCCCCTCCAAGCCTCGCCGCTTCGGCCTCACCGAGAT GCGAAGCCCCCATTACTCTCTCTTCAGCCACAACGTTCTTCAGGATATATTTGAATCTATGGGGGAATATGTAGATGGGT TGAAATTTTCAGGGGGGTCTCACAGTTTGATTCCTAAGCCTTTCATCAAACAGGTCATAGACATGGCTCATCAGCATGAT GTGTATGTTAGTACAGGTGATTGGGCTGAACACTTGATTCGCAAAGCTCCTTCAGGTTTCAATGACTATGTTGAGGAATG CAAGAAGTTGGGGTTTGACACAATTGAGCTGAATGCGGGTTCACTTGGAGTTCCTGAGGAAACCCTTTTGAGATTTGTTC GCTTGGTTAAAAGTGGTGGCATGAAAGCTAAGCCTCATTTTGAAGTGAAGTTTAACAAGTCTGATATGCCTAAAGGTGGT GATAGGGCTTATGGGGCTTATATTCCCCCAGCACCTAGATCATCCGAACTAGTTGAAGATGTGGATCTCTTGATCAGAAG GGCTGAGAGATGTTTGGAAGCAGGTGCAGATATGATACTGATTGATGCTGATGATGTCTGCAAACAAGCTGATCATATGC GTGCGGATATTATCGCGAAGATCATAGGGCGCCTTGGTATTGAGAAGACTATGTTTGAAGCATCAAATCAGAAAGCATCT GAGTGGTTTATCAAACAATATGGTCCAAAGGTGAACCTTTTCATTGATCACTCGCACTTGGTGGATGTGGAGTGCCTCAG GGGACGCAACTTAGGCCGAAACAATGCTTCGGTCCTCGGTTCTTCATATTACCTGCTCTGA
Protein sequence (LotjaGi4g1v0045500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAYPWKTFDENEDRPSKPRRFGLTEMRSPHYSLFSHNVLQDIFESMGEYVDGLKFSGGSHSLIPKPFIKQVIDMAHQHD VYVSTGDWAEHLIRKAPSGFNDYVEECKKLGFDTIELNAGSLGVPEETLLRFVRLVKSGGMKAKPHFEVKFNKSDMPKGG DRAYGAYIPPAPRSSELVEDVDLLIRRAERCLEAGADMILIDADDVCKQADHMRADIIAKIIGRLGIEKTMFEASNQKAS EWFIKQYGPKVNLFIDHSHLVDVECLRGRNLGRNNASVLGSSYYLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| Gene3D | 13 | 275 | 263 | 1.7E-61 | ||
| SUPERFAMILY | 13 | 267 | 255 | 4.71E-72 | ||
| Pfam | 14 | 270 | 257 | 1.3E-79 | ||
| PANTHER | 18 | 184 | 167 | 3.1E-14 | – | |
| PANTHER | 18 | 184 | 167 | 3.1E-14 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi4g1v0045500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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