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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0051500 |
| Transcript ID | LotjaGi4g1v0051500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP synthase delta-subunit; TAIR: AT5G13450.1 delta subunit of Mt ATP synthase; Swiss-Prot: sp|P22778|ATPO_IPOBA ATP synthase subunit O, mitochondrial; TrEMBL-Plants: tr|I3S1K1|I3S1K1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0051500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:6216116..6221531) extracted from Lotus japonicus Gifu genome v1.2.
GGGCCGAAGTAGTATATGAATACTAGCATATTCAATTTAACACTCTTTTGTTAAAAAAAAGCCTGCATTGCCAGAAAAAA AAAAGAGAACGTGTAATTCGCTTGCATAAAAAAAAAAGAACGTGTTGGAAGCTACAGCACTAGCTCTCTCTCACTATTGA GAAGCAAAGCATCGGTTTCATTTCACGCCACTGTGTCTGTGACTTGAATCTTCTGAAAATTAGGGTTTCGCAATTCGCAT CGCAGAAATGGCAGCATTGTGCAACCGAGTTAGATCGGGGATCGCTCTCTCCAACAAATTAGGGTTCCTCACTTCCCACA GATCCTCCACCCTTGTTGCCCCTCTGGTAAAATCTCGCGATCATTTCCGTTCTATTGATTGATTGATCGATAACACTTTT TGCTAGATCGTTCAAGTTTCGAAATTTACAGTTTTTTTGTTTACCCAATTGCCGATTTGTTTGTTTAACGATAGAGGGTG TCAGTGTATGGAGGAGGAAATGGTGATTAGCTTAGAGAGAGAGAGGAAAAAATTGGAAATGGTGAGTTAGGAACAGTGGT GTGTGTTTTCATGGGGGTTTGACTAGAAACTATGGTGGTTGTTGGTGAAGGCGAAGGCATGTATGGTTGAGGTCGCTTAT GTGGCTACACCGTGGAGATTTCAACAGAAATGGCCACTGGTTGTTGATGATGGAATCGGGGTTGTTTTGTGAAGAAGAAG AATAAGAGGAAGATGAGCCGCTGTTCAGGTTCTAGAATCAGGGTCTCTTTTGGAGCCTTTGCTCACTGTTAAGAGGGGGG GATTGATGATTGGTTTATATGTATGGAAGTTTAGGTTTTTTGGAGGATGGTTCTCTCATGGAGCTCGGGATTGGAGCTTT TTATGGCTAATAGGATGCTATCCCCCCTCTGATCAATACATAGCAGTTTTGGTTATCAATTAAGTGGTCAAACGAGTTAG AACGTTTTTGTTACAATTGCTTACCCATTTTCTATGTGTTTTAGTCAATTGGCCCCTTATATGTATACGACTTGATCACC TTTTTTTGTCAAAATGTTTACCGAATTTTTTGTTGTTTGTATTAAGCCATTTTGTTGGAAGTTTAAGAATCTGCATTCTT GTCTTGTGCCTTTTGACAACTTATACTGTGTTGACAGTTTTGAGGTTTGGGTGTGATATAGACTCTCAACGCAGTTTCCT GCATCATGTTTCTGTCTTTCTTTATGCTGGCTGCCTTTTATTTGTTGTGAGAATAATTTGTTCCCTTCTCATCTTATGCT TGAGCAGGCCTCCAGAAATTATTCCACCCATGTGCCAGGGCAAAAGGATACCAAAATTAAGGTAATCAATTTATTGGCCT TGAATTGCTCTTTCTTACCTGTCATGGATTGAAGAAGAATACAGAATATAGGAAAAAAATTACCAGTCCAGTTAGTTGAA TAAAACTGCAAGGAATTCAATGCTTTTTCAGCTCCATAGTTCTTTAACTGAAGTTTTGTATTATTGCTTCATCATATATA TTCTATTTCATTTGGGTCTGGTACTCTGTCGAATACTCGAATGTTTGTGATAAGTATTTCGTTCTCTGAAGTGTTTGGTT TGTTGTTATTGGTGGATGGTATTGACTTGTTTTCTCCCTGTCTTATTCCTTCTGCATTCGTTTTTAGGTTCCTTTGGCAA TGTTTGGAGGTTCAGGAAACTATGCCTCTGCTTTGTATATTGCAGCAGTGAAAGCTAAAGCAGTGGAGAAGGTTGACTCT GAGCTTCATCAATTTGTTGAGGCGGTAAAGAACAGTTCCCTAGTTTCACAGTTTGTAAAGGACATATCTGTGGCTAAGGA TGTTAGAGTCAAGGCCATCGAGGAGATTTCTCGTGAAGCTAAGTTTGCAGAGGTTACAAAGAATTTCCTTGGTACGACAG GCTTTCTTAATGTTTAAAAAGTTTATATTTTTGTATACAATGTTTGCAATGAGGTTGAAACCTATGAGCTCATGCAAACT ACCCGAACCCCTCACCACAAGTCCAATCCTACCATTTCATTTATCTTGCTAAAGGAAATTTAGGTATTTGATCTTGATGG TTTTAAAATCTTGAGTCAGATATTATTACCTTCTTATTATCCTCAGTAAAAAAGAGAACAAAAGTTGATTTGAACTTTGA AGTAATAATTTCCAGGTTTTATATATATACACTATATAGACATGTTTTAAATAATAATGTTACTTTTCCATTGGATTTCA TTGACAAATGCAGCAGCAGCTCAGTAATTGGCTTTAGAGGATGATAAAAAATGATTGTTTACTTCTTTAATTCCCCTGAG GCTAGAGAAGAACCAAAATAGATTAACTATCTGGTTATAGATCTCCACTCTAAGCATCCAACCAATCAAAATCACAAAAG ACCTGTGAGTTGCAGGAGAAAAAAGCCTAGACTAGGAGGATTTGATTTTTTAGTATCCAAGAGGCAACCTTATAGTGAAC ATTTGTTGAACCTGCTAAAAAAGGATTCAACTGTTAGGTAGCAATAGCTTGGTAGAATGCCTTGTAGGCAGTTGTGTTTT AAATGCAATATGTTTGTGGTGCTGGATTCGGGAAAGAGGTTGAGCTATTAGGGTGAGAATTGATATTATGTTAGGGAACG GTTTGTAGGACAGGTGTGGAGGTGGGTAGGCAAAGGTATCAGAATTAGGGGTAGAATCAGAAGTATTGTGAGCTGAATGA AAAGAAATAATAGTGCCTTAGTTTCACAGTTTGTAAAGGACATATCTGTGGCTAAGGATATTAGAGTCAAGGCCATTGAG GAGCTTTCTCGTGAAGCCAAGTTTCAGATGTAACTAAGAATTTCCTTGGTACGATAGGCTTCCTTATTGTTGTATGATAT TTACGAAGTGTTTTATTTTTTGGACTTTGTTATTCAATAGTTGCAATGAGGTCATGCCTTAACGGAATACCATTGGAGAT AATAGATGAAAGGGTGCTAGTGTGTACCCGAAATAGGATCCCTTTGAATGTATCATGATAGCATTCAATATTAATATGAT GTTAGATAACAAGTAGAAATATAATGGTAATGTAGGATGTTTTAGTTTTGCTATCTTGGAACTGTCACTATTGCTGCTGG TATCATTTATCTCCAACCAATTATATGCTATATTATTTTTCTGATACTATGATTCATTTTTTGTTGTAAAGTTGTTGTCG CTGAGAATGGGAGGCTTAAAAACATAGACACCATTGCAAAGAGGTTTGGTGAGTTGGCAATGGCATATAAGGGAGAAGTG AAAGCGACTGTGACCACTGTCTTTGTAAGTGTTACTTCATTGATGGTCAACTTATTTTTATCCTGTAGTGTAGCATATTA CATATTTATACTTTTTTATTGCACAATTCAGTTCCATGATTTTTGCAGAGGGATGATTGCATTCTAAATTGTTATGTGAA TTAACTTTGGTAGATTTAGTGTCCTATCTTCGCATCTTCCATTAATTAGTAAAGACAAGGAGACTCACTATTCCATATGC AGAGTTTGTGCGGAATACTTCAGAATAACTTTATCTCAATTATATTTTTATTTAAAAACAATTGAAGTTAGGCTTATAAA CGTGATTTAAAAATAATTCAACAAAAAATCATTTTGAGACTAGAATAACCAGTTACTATCTGTCATTCTCACCATTCTAC CATAATCTTTATGGTTTCCTTACTTACTATCTTATTATCTCTCCTCCTCTTTCTCTCTACACAGGCACACATTTGTATGA GTGTGTTCTTTTCTATTTCTAAATTTACTGCTGCTTACACATAATTGCTGTCAAAATTTACTGCTGCTTATTTTCTATAG TAAGCTGTCTAAAAGCTCATGCTTATCATGATGGTTTTTGGATTATATGAGCATTGTCTTTTGAATGATTGGTGGGACAT GTGATAAGATGTTATCTCATCAAACAGCAGTGATAGTTACTCCATTACCTAACTTTCTATAATTTTCTACCAGCCTCTCC CCCCTGAAGAGGAGAAGGCACTGAAGGAGACTGTTCAGGAAATCATAGGTTCTGGGGCTAAGGTTTCACTTGAACAGAAG GTATTCTTTCCCTTACCCTGATATATGAATTGAACATTCATTAAATAATCTAGAAAAGAAAGGATGAAAAAAGTGCTTAC TAGTTTTTTTGAAATATTGAGTTCTGATGTAAAGAAAAAAGTTACTATCATATAAATCATATAAATGTGCTATTTTCACT AATCTGAAGTTATTTAATATTATTTATATATGTCAAGGATCACATAAATACTCACAAAAGCTTCTTTCCAAAATTGATTT TGCTTTAGAATCAATTATAGAAGGATTTTTAAACATGCACATAGTGAAACTTCTGCTCTCTCTTTATATGTTTATTTGTG TGAGCACCTGCGCTATTCGGTTGACTTTGCTTTTCATTTTGGGTTTCCTAGATTGATCCAAGCATCCTTGGTGGCCTGGT GCTGGAATTTAGCCAAAAGGTCTTTGACATGTCAATTAGGACCAGGGCACAACAGATGGAGAGGATCCTCCGAGAGCCCA TAAATATTTCCAACATCTAGATGAAAATTTTCTCCTGACAACCTATTTCATCATGGTATAAGGAAAACAAATATTACATT CTTGTTTATTGTGAGCTTTATGAATTTGGATTTATATGGGATGGAATGCCATCATTTTGCAAATAAAAAGCTAACTCTTT CCAACTTGTTCTTGGAAATCTTCAAGTCTGATTTTTATTTTGATTTAGTCTTTTGTGGTCTAAATTTAGCTCCTGTTATC CAATAATATGAATTTACTCACTCTAAGGTTGTTTGTCTCATTATCTGGATACTTAAATGCGAATGATGCTTCCTACTACA AGAAAAAGGAAAATGGGCCTGTATGTAGCTGTTGGATGACGACTATTTATCTGTTCAATAGTTAATTTTTGCTATTATGA AGTCCAGGATTTATTTTTTTGGCAATTCTGTTTTCTTAAGGTTCTAACGGTTCATAGTGTGAGGTGGACTTTCTAGCGGT AGTTTAAACTTAAAAAGCATTAAATATTTTGTTTTTTAAATAACCACAAACCCTCCTAGCCACCACCACCACTTCTCCTC TCCTCTCCTGGACGGACCTCACGAGCCATCGCCATTGCCACCACTAACACTTCTTTCTTCTCGAGGTCTGTAAGTGTAAC TTCTCACCCACGGCGTACATTTGCTTGATCATCGAGTTCACCCTCTGTATTTCGGTCCCTTGTGCCTCCTCCACATGCTT GACCAATGAGGCCAAGTCTTAACTTTCTTTCATTTGTCACTATCATCTCATTATCAAGGTCGTAGAAACTAGGACAAAGG ACAAAGGGTTTTTTAATCTTTTGTTGAGATTTTTACTCGAGCTTTTAGAATTGGTT
CDS sequence (LotjaGi4g1v0051500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGCATTGTGCAACCGAGTTAGATCGGGGATCGCTCTCTCCAACAAATTAGGGTTCCTCACTTCCCACAGATCCTC CACCCTTGTTGCCCCTCTGGCCTCCAGAAATTATTCCACCCATGTGCCAGGGCAAAAGGATACCAAAATTAAGGTTCCTT TGGCAATGTTTGGAGGTTCAGGAAACTATGCCTCTGCTTTGTATATTGCAGCAGTGAAAGCTAAAGCAGTGGAGAAGGTT GACTCTGAGCTTCATCAATTTGTTGAGGCGGTAAAGAACAGTTCCCTAGTTTCACAGTTTGTAAAGGACATATCTGTGGC TAAGGATGTTAGAGTCAAGGCCATCGAGGAGATTTCTCGTGAAGCTAAGTTTGCAGAGGTTACAAAGAATTTCCTTGTTG TTGTCGCTGAGAATGGGAGGCTTAAAAACATAGACACCATTGCAAAGAGGTTTGGTGAGTTGGCAATGGCATATAAGGGA GAAGTGAAAGCGACTGTGACCACTGTCTTTCCTCTCCCCCCTGAAGAGGAGAAGGCACTGAAGGAGACTGTTCAGGAAAT CATAGGTTCTGGGGCTAAGGTTTCACTTGAACAGAAGATTGATCCAAGCATCCTTGGTGGCCTGGTGCTGGAATTTAGCC AAAAGGTCTTTGACATGTCAATTAGGACCAGGGCACAACAGATGGAGAGGATCCTCCGAGAGCCCATAAATATTTCCAAC ATCTAG
Protein sequence (LotjaGi4g1v0051500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAALCNRVRSGIALSNKLGFLTSHRSSTLVAPLASRNYSTHVPGQKDTKIKVPLAMFGGSGNYASALYIAAVKAKAVEKV DSELHQFVEAVKNSSLVSQFVKDISVAKDVRVKAIEEISREAKFAEVTKNFLVVVAENGRLKNIDTIAKRFGELAMAYKG EVKATVTTVFPLPPEEEKALKETVQEIIGSGAKVSLEQKIDPSILGGLVLEFSQKVFDMSIRTRAQQMERILREPINISN I
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 33 | 236 | 204 | 7.0E-76 | – | |
| PANTHER | 33 | 236 | 204 | 7.0E-76 | ||
| Hamap | 55 | 234 | 180 | 16.235 | ||
| Gene3D | 58 | 152 | 95 | 1.1E-23 | ||
| PRINTS | 59 | 78 | 20 | 4.3E-21 | ||
| SUPERFAMILY | 60 | 160 | 101 | 1.83E-18 | ||
| Pfam | 61 | 232 | 172 | 4.6E-40 | ||
| TIGRFAM | 62 | 232 | 171 | 1.3E-27 | ||
| PRINTS | 129 | 140 | 12 | 4.3E-21 | ||
| PRINTS | 140 | 154 | 15 | 4.3E-21 | ||
| PRINTS | 192 | 207 | 16 | 4.3E-21 | ||
| ProSitePatterns | 194 | 213 | 20 | - | ||
| PRINTS | 207 | 225 | 19 | 4.3E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | ATP synthesis coupled proton transport | The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Proton-transporting ATP synthase activity, rotational mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism. |
Expression pattern of LotjaGi4g1v0051500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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