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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0064300 |
| Transcript ID | LotjaGi4g1v0064300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 28 kDa heat-and acid-stable phosphoprotein-like protein; TAIR: AT5G46020.1 28 kDa heat/acid-stable phosphoprotein-like protein; Swiss-Prot: sp|Q13442|HAP28_HUMAN 28 kDa heat- and acid-stable phosphoprotein; TrEMBL-Plants: tr|G7IFI0|G7IFI0_MEDTR 28 kDa heat-and acid-stable phosphoprotein-like protein; Found in the gene: LotjaGi4g1v0064300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:8054469..8058089) extracted from Lotus japonicus Gifu genome v1.2.
TCCAAAATTTTCTAAGGTCTAATTTGTCAATTCAATTTAAGTAAGAAAAAGCCAAACTCTCCAATTGATGACACAAACTT GTTCTCTCTCACTCCCAAGTTGAAAAACATCAGAGTATTAAACTAGGGTTTTCCATAAACTGAAAGGGATTTGGAAGAAA ACAAGTGCATCTCAATTGGTCCTCATTCCTTCTGGGTTCTCAAATTCAATCCCACAAAGTGTTCACAACACTGCTATTAT CCACGTAAACTGCTGAAAATCGAAGCAGCTTGCAGTTTCCACCATGGGAAGGGGAAAATTCAAGGCCAAACCCACCGGTC GCCGTCAGTTTTCTACCCCGGAGGATATGCGTAAACCCCTTTTGATTTTTCTGCTTCATTCTCGATTTGCGTTATTGGTG TGATGAATTAACATTGAAATGACTAGTTTTTTTTTGTGTAAAAATCTTATTTTTAGGTTAACCAGTGATTGCCATTGATT TTTGGCTTGTGGGTATTAGGGGTTGTTTATATCTCTCTGATTAGATCTGAATTGATTGCAAGTCTGAAGCTTTTTGGAGA TATTCTTGTTTGAATTTAATTCTACTTACTGTTTATAGCAAAGCTTTAATTGTTAGATTTGTACTCACAAAATGGGTGTG TGAGTGATGGCTTTAATGAGTAGAAAAGTGAATGAAATTTTATATTTTTTTCAATGACATGAGTTTGAAAAGCTGTTCTG ATGAGAGCTTGGTGTTTCTTTTAATGACTGCAGTTGCTGGTACCTCCACGCGTCCGAGGACTTTTAAACAGGTTTTCTTC TCCCTCCCACTTCTAACCTTTCTCCAATTTTCTGTTTGTCTTTCATTCACATGTACACACTGGAGTGAGTGATCATCTAC ACATAGGAGATGTTTGCAAAATAATTTTTACTCTTTGTTAGTAGAACATGAATAGATTTAATTTCATTATAAAAGAAAAT TTATTACATCAATGGTTAAGTGTATAATTTGTTTCCATAAATGCAGTACTATTCAATGTTAGTTCCCGTTGAATCATTAG TTAAATTTGTGTGTCAGATTTTTTAGAATTGAGTGAATTTGATCTAACAATGGAAAATGAACCTAGAACTCACCTTTGGC ATGTGTCAATCATATTAATATTGCCATGTCCCCTACCTCTCTTCTTCTTCCTCTTCTCTCTCTTTGTAAAATTTCTGGTA GCGAAAAGCCCAAAACAACCATGAACACAATAATCACATGTAAACCATCATCATTCCTTCACCATTCTTGTTTCTTTCAA AAGTAGAGCAACCTCTTGGCTGCTTCCTTTTAGTTTATGTTGGTGAAGGACCTAGCGTCATTGACGAGTTACTGAATAAA AGATTCTATAATTTGATCAGTTAAGATCTTAATAGGTACTGATTTAAATTTTAGATACCATAGCTGAGCCTGGCATTGGG TAGTGTGGAATATGCAGGAATGGACATCTGCGGGTGGCCCATATTCGAGTGGTCTCCACTAAACGGATCTAGGATAGACT CTGATACCATAATAAAATTTGGGAGACTTAACTCTATCCCAAAAGCTAACTCAATAGGTGAGGATTTCCTTCTTATATGT AAGGGCTAGTCAATGTGAGACTTCTCAATGTGGACATTTTGCTAGGTCATCAATTATTGGATACTGTATAAAGGCAGGAA TTAAATTTACTTATATATAAAAAAGTGAGCCAAAATTTCATGGAGTCCAGATTCCATTGGTGATATAATTATAAGACTAA AAATACATTTCAACTTTTTGCATCTATGGAATATTTATGAGAGGATCCGTGTACTTTAATATAAACTAGAAGATCGTAAT CCTTAAAATTCTAGCTTTTTCTATCTTAAAATATTAAGAAAAATGTGGTTTAATAATTTTGCTGTTGGATTGAAAACTGC CCACCTGCAGTGTATATTTAGGAATTGCAGGGTATCCCATTCTATAGATGTTTTACAAATGAATATTATTTAACATGGAG ATTTTCTTTATGACCTTTCTAAGAAAGAAGTTGAGGATGAAAAGGAGGTATCTGAAGAAGAAGCAACTTCTGGGGATGAA TCTGAAGAAGAAACTACCGTGAGTACATTACATTCAATTACTGATATAGGGTTTTGCTCCCCCCCTTTTTATGTTGTGTT TTATTTGTTTCTTTGGTCTGCAGAAGACAAAAGGTACTCAAGGGGTTATTGAGATCGAAAATCCTAACTTAGTAAAGCCA AAGAGCTTGAAAGCTAGAGATGTTGATGTGAGTTCATCTTTCCATTTTTGGTCCTTGGACATCTTTGTAGTAATTACATC ATGTGAAAAGAATAATGATAATTCCTTTCCCATGCAGTTAGAGAAAACAACTGAGCTTTCCAGGCGTGAAAGGTATACTT CCTTCCATATGCTTGTTGCGTATAAGGATAAAGGATAATCACACTTGAAAAGGAGTGTTGTTTATTGTCAATGATAAAGG AGCGCATTACGCTCTTTTTCTGCTTCTTATTCCTTCAGTTTTAATTTGACAAAATATTGAAGCTAAAACTTCTGCATTGA TGGACTTTTTCTGATATCTTAATTTCTTTTCCTCCCGTCTTCAGAGAGGAGATAGAGAAACAGAGAGCTCATGAGCGCTA TATGAGGCTGCAAGAGCAAGGAAAAACGGAACAATCCAAGAAAGATTTAGGTACTAGTGGCTCTTGAATAATGTCTCTAG TTAAAGGTTTACCAGAATAAAATATGCTTTACCAGAATAACAGAAAATAAACAAAAACAAACAGGCTCTTGATACATCAC TAGTCTTCGATGTGGGGATTTCATTTCCTGATGATTAATGTTCTATTTTCTTGTCCTGCAGAGCGTTTAGCTCTTATCCG TCAACAAAGGGCAGAAGCTGCTAAAAAGCGTGACGAAGAGAAAGCGGGTAACTTTAAATGCTTGGCTGCTTTGCTTACTC TTTTCTGATACCCCAAAATTAAAAACTTGAAACTGATAACTAAACCATTTATTTCAGCTAAAGAACAGAAGAAGTCTGAA GCGCGCAAGTAAATCTCATGGAGGACGTAATGTGGCCGATTTTCACTCCATTTTAATCTCATGTGCATGTAGCTTTATAT TGGATATTACATTCCATATTGGTAACATGTAATGCAATTATTTCCTTATCATGTGGACTGAAATCTTGATAATATATGCT TTACCCTTCAAATCTAGCTATGGGAAAGAGTTTCGGTATGTGTGCTCCTTGTCATCCTCCATCTGCTTTATCTTTTGATG CTTATAATTAATTTTGTTCATTAATGTTCATGCATAATTAAGGCTGAAACTTTTGCCTGCCAGAGGCTGAAGTTATTAAT ATTTCTTTCTCCTTCACGCCCAGCATTCATGTTGCTTTCTTCATGAGCATTATATAGCAACTGGGCAAGCTATTAAGAAA GCCTTAAAAACAGCTCATAACATACCTGAAATAGATAGTGGTTAGAGTTTGAATGAAGTTTGTGCAGCTGTGGCCTGGTG TGCATTTGGTCCTGTGGCAAATATACAGGGGAAAAATGTTTTTTTTTTCTGCTTGTTCCATGGAGTACTTAAACTATAAG TGAATTATTGAACCAGTTTAA
CDS sequence (LotjaGi4g1v0064300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAGGGGAAAATTCAAGGCCAAACCCACCGGTCGCCGTCAGTTTTCTACCCCGGAGGATATGCTTGCTGGTACCTC CACGCGTCCGAGGACTTTTAAACAGAAAGAAGTTGAGGATGAAAAGGAGGTATCTGAAGAAGAAGCAACTTCTGGGGATG AATCTGAAGAAGAAACTACCAAGACAAAAGGTACTCAAGGGGTTATTGAGATCGAAAATCCTAACTTAGTAAAGCCAAAG AGCTTGAAAGCTAGAGATGTTGATTTAGAGAAAACAACTGAGCTTTCCAGGCGTGAAAGAGAGGAGATAGAGAAACAGAG AGCTCATGAGCGCTATATGAGGCTGCAAGAGCAAGGAAAAACGGAACAATCCAAGAAAGATTTAGAGCGTTTAGCTCTTA TCCGTCAACAAAGGGCAGAAGCTGCTAAAAAGCGTGACGAAGAGAAAGCGGCTAAAGAACAGAAGAAGTCTGAAGCGCGC AAGTAA
Protein sequence (LotjaGi4g1v0064300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRGKFKAKPTGRRQFSTPEDMLAGTSTRPRTFKQKEVEDEKEVSEEEATSGDESEEETTKTKGTQGVIEIENPNLVKPK SLKARDVDLEKTTELSRREREEIEKQRAHERYMRLQEQGKTEQSKKDLERLALIRQQRAEAAKKRDEEKAAKEQKKSEAR K
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 161 | 161 | 3.7E-79 | – | |
| MobiDBLite | 1 | 161 | 161 | - | – | |
| PANTHER | 1 | 161 | 161 | 3.7E-79 | ||
| Pfam | 73 | 150 | 78 | 1.8E-26 | ||
| MobiDBLite | 79 | 161 | 83 | - | – | |
| Coils | 98 | 118 | 21 | - | – | |
| Coils | 134 | 158 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0064300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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