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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0096800 |
| Transcript ID | LotjaGi4g1v0096800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | A-kinase anchor protein 9, putative isoform 1; TAIR: AT5G67390.1 glycosyltransferase-like protein; Swiss-Prot: sp|Q657D6|ELF32_ORYSJ ELF3-like protein 2; TrEMBL-Plants: tr|I3S5W2|I3S5W2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0096800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:13075337..13078995) extracted from Lotus japonicus Gifu genome v1.2.
TCACTCCTTGCTCTAGTATGGAATCAAACAAAAGAATGAATTAAGGTTTTGAGATAAACCTCATATATGTATATGATCAT TTTATTATATGTGTGAAAACTGAAATCCAAATGTTGGATTATTTTAGATCCTGAAGCCAGTTAGAACTAGCTTTGAAATC TACGAGAGATACCCACTAAATTGTACGGTCAGGATCTATCTGTCGGCGGAATTGAAGATGTCACCTTAAGCACCTTCACA TAGGCACGCTTCAATCATACAACAACACATAATGCGCAATTTGTTTAATGTTTACTATCACTACAACTGAGAGACAGAGA CAACTATTTTATGATACAGAAATTTTAGGTGCATGTGATTCACCTCCAGGCTATGTTGTCTGTCCTGTTTGATGATTTGT CATGAACATACCAAGGCCTTGTGATCCTCAACAATTATTTAAATTTTAAATATAGTAGTAGTGCTAATAATGCATGTATT TATTTATTAATTCATTCCCTCTTCTTTATACTGTTGTTTAATTTAATATATCTGCATTGCTGGAACTGCCTCAGGCATCT TGTCCACAAAACTTGAACGCAATTGGTCAAGGCACTGGGATTTGTTTGGCATGCCTCTAACCTCATGCAATAGCTAGCAC TTCGGTTTCTGTGTGTAGAATCTTGAATTCTACAAACAGTTATAGTTCCTGTTGCATTATAAGTATTCTATTTAACTGCC AACAGTATAAACTGGAGAGCCTGATGGGGATGTAAGAGCAAATTAGCAGTCTTCATCAAATTCAACAAGATTGTAACTGA AGTTGAGTTGAAAGGGAGAGCCTTTTTGCCTTTCCTTCAGAGATCTTCTTGTTCAGCAGAAAATTGTGGTGTAATTGAAT TCTGTAAGGTAAGAAGCTATATCCATTACTAAGAAGCTAAATTCTGTTAACATAGATTTGCTTCTTGGAAGTGCATGTTT GAAAACTCGTGCGGAAACCCGGCAAAGTAATGGTGTGCTGAAGCAAAGTTAAGAGAAATTGTTTATGTTCATCGTGATTT TAGCTTCATATTTTCAAACGAGTTTCCAAACATAACTTCATTCCTTGATGTTTGAAAAATGAATTTTGTTTCATGTTTTT CTTTAAATTTACCATCTGGTTTTAGAAACTGATAGTTGCCTTATTTGTTCCCTTTTAGCCTGCAAGTTTTGCTTCATATT CTCTATTTTTATGGTCATTGGCTTCTGTAACATAGTTTCTTTGCTTGGCTTTGGAGATGATATATTAATTTTTGGAATTC GTATCATGTCATTTGTGTGAGAGTTTAATGACATGTTGAATAGTAGATTGTAGAGTGGCTTAAAAACTAATGTAGCAGAT TACATGAATGAGAGAGAAAACAGAAAGTGAATTAGTTCAAACAATCTAGTTAATTGGTTTCCCTTTCCTTATGGCTCTAA CCATAATGAGATTGTTTCTTCCAGCTATCTTTTTAAACCGGGCATAATGAAAAGAAGATAAAATTATTGTCTAGATCATG TGTTTAAATCAGCATTGCAATAATTGAGAGGATAACTTGAAAAATGACATCATGTGTGGGCACATATGAAAAGCTATTAT TATGGTAGGAAAATTAACACGCAAAGATGTCGGGAAGATATTTTTTTCTTGATGGGTTTCACTCAAATGTGGTCCAAGGT ATTGAAAGGATCAAGAGCAAGGAAAAGGAACAGACAAATTATACTAAAAAGAAGCTGATGCCATCATTTTGTACTAGCTA GTGTTTCAAGAATCAATCAAGATTCCTCAAACCATTATGTTTTCTATATAAACAACTTCTCATTCATCAACTGCATTCTG TTAGAATTTTCCTCATTTAAGCTTAACTGCAATATATATAAATATATAGCTTATATGAAGGTTCTGTTCTGTGGTATCAG GAAGACAAGTCCTAACATAAATTTCCTAGAGAGAAAACTTGTCTGTGTTTCTTATGGAGAAGCCTATAAGGTCCTGTGAC AAAGAATACATGAGGATGGCCATGTTGAAGCATGAAGAAACTTTCAAAGAGCAGGTACCTTTCTATCTATTACTTGATAT TATTCCTCAACCATTATCAGTATTAGAATTCGAGTTAGACCTAACTCTACACTAAAAGCTAATTAAGGGTGATTGTGGGG GTTCTTTCACCCTTTATATGGACTACTTTAGTCATATCTCTATCTCTGATCTCTGATCAATGTGAGACTTTCTCGACAAT CAGCAAATTAGATACTAAGTGTCCTGAGATTTTTCACAGGTATATGAACTTCATCGTTTGTATAGGATCCAGAAGATATT GATGAAAAACATGGAAGCCAGAAGAGGCATTGAAGTAAGCTATTTCAATAATGCAATTAGTTTAACTCAAAATGGAAATC ATAAAGGTGCACAAGAAAAGCCTCAGATCAAATTTGATCTAGAACAGCCTGCAGAGGAGCATTTTGCAGAATCAGAAGAT GGCGTCCTAGAAATCATAGATGAGACTGAGATTGAGCTCACATTAGGCCCCTCAAGTTATAATAGAGGTAGGAAGAAAGT TGAGACACCACTAACTTCAGATTCTGGACATAGCTTGTCTTCTTCTTCCACTGGTTCAAGCCATAGAAACAAGATCACAA GATACAACACTCATCACAGAACAAGAGAAGAATCAAGTGGAATTAGAAACAGTTTTCATATTGAAGAACAGTTGAGATCA CAAGAGAGGCTAAAACAGTCACCTTGGCTTTTCCAAGTGTTGAATCTGAACATGACTTGAAAAAAAAGATAAAAATTGTA AGGTCAATCAATGTGATCTATTTAAATTTCTGTTTAGGAGTTAAGACTGACTTTGTGAATGATGTTTGTGTGGAATGTTC TGCCAAAAGTTATGAAACGTGGTGGGGTTTGTTATGTCTCCCATATGACGACTTTTTTTTTCCTTGGTGCCCAGTGCCCA CAGACATTACTATTCACTTGTCACATGCCACTAATATTTTCTTGATTCTGCAGCTACTCACTTTTCTTGTCACTAAAGCC TGAAAATCATCCTTTCATGGATTAAGGTGGACAGATGTATGTAGAGCTTGTTAAATTCCTTACAATTAAGAACTTTGTAT GAAAGGCAATGAGATATTCCAATTTAATTAGGTTCTCACCATCAAATTCATCCTTTCAACAAAGAAATTTTTGATAAGTG ATTTTGTTGGAGATAAAGAGGAGCACAAAGTTGGAGAACACGCACCTATAAGTTAATATTGAAGACTATTAAGAGATTTG GATATCACATATTTCCCAAAATTTTAAGGTACTTATAAATGAGTCACATCTCTTATATTGCTTTCAACTCAACCATTCTT AGTTAATGTGAGACTCCTACTCACATAGTACGACTCACTACCACATTACTATTTCCCCTCATGGAAACTATTCACACGTG CACTATCACTATCTTCACCGCGTCAACGAGACATGTCGATTGAGCACCAGATTGTGAAGAAAACTTTCAATACAAGGAGC TATCGTCATGGTCACACTAACTATAGCTCTGAAACCACTTGTTGGGAAGATAAGGAGAGCCCAAAGTAGGAGAGTCTGCA CTAATGGACCAACAACGAAGAACTGTGAGAGTTTAAAATATTCCATCTTTATGCAAAAT
CDS sequence (LotjaGi4g1v0096800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAGCCTATAAGGTCCTGTGACAAAGAATACATGAGGATGGCCATGTTGAAGCATGAAGAAACTTTCAAAGAGCA GGTATATGAACTTCATCGTTTGTATAGGATCCAGAAGATATTGATGAAAAACATGGAAGCCAGAAGAGGCATTGAAGTAA GCTATTTCAATAATGCAATTAGTTTAACTCAAAATGGAAATCATAAAGGTGCACAAGAAAAGCCTCAGATCAAATTTGAT CTAGAACAGCCTGCAGAGGAGCATTTTGCAGAATCAGAAGATGGCGTCCTAGAAATCATAGATGAGACTGAGATTGAGCT CACATTAGGCCCCTCAAGTTATAATAGAGGTAGGAAGAAAGTTGAGACACCACTAACTTCAGATTCTGGACATAGCTTGT CTTCTTCTTCCACTGGTTCAAGCCATAGAAACAAGATCACAAGATACAACACTCATCACAGAACAAGAGAAGAATCAAGT GGAATTAGAAACAGTTTTCATATTGAAGAACAGTTGAGATCACAAGAGAGGCTAAAACAGTCACCTTGGCTTTTCCAAGT GTTGAATCTGAACATGACTTGA
Protein sequence (LotjaGi4g1v0096800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKPIRSCDKEYMRMAMLKHEETFKEQVYELHRLYRIQKILMKNMEARRGIEVSYFNNAISLTQNGNHKGAQEKPQIKFD LEQPAEEHFAESEDGVLEIIDETEIELTLGPSSYNRGRKKVETPLTSDSGHSLSSSSTGSSHRNKITRYNTHHRTREESS GIRNSFHIEEQLRSQERLKQSPWLFQVLNLNMT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 193 | 193 | 7.3E-61 | – | |
| PANTHER | 1 | 193 | 193 | 7.3E-61 | – | |
| MobiDBLite | 111 | 162 | 52 | - | – | |
| MobiDBLite | 126 | 145 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0096800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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