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LotjaGi4g1v0103100.3

Overview

Field Value
Gene ID LotjaGi4g1v0103100
Transcript ID LotjaGi4g1v0103100.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Caffeoyl CoA O-methyltransferase; TAIR: AT4G34050.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|O49499|CAMT4_ARATH Caffeoyl-CoA O-methyltransferase 1; TrEMBL-Plants: tr|I1LHD2|I1LHD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0103100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:14299042..14300373) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCTGCCAATAACGGAGAGGAACAACAGCAAAATCAACTCATCGGCCACCAAGATCTAGCTCATAAGAGTCTCCTTCA GAGTGATGCACTCTATCAGGTTCCCTGCAACAACTAGCTAATTTCAATTTTTCTCTTTTTCACCAAGTATACTCAATAGA TGTATGTATATGCTAATAGCAATTTATCTCTTCTGAGCAATTGTAGTATATACTTGAAACCAGTGTGTTTCCCAGAGAGC ATGAAAGCTTGAAGGAGCTTCGTGAGATGACAGAAAAACACCCTCGGTATGATTGATCATGGTTATTAATTCTATTTCAT CAGCAGATTCATCTATTGTTTTTTTTATTGACAAAAAAACAAACTTTCAAGTACACCAGATAGACCAAGCCAATTTTATG TGCAAGTGGACATTTCATACATGATACATGTGTCACTGTCTTGTACAAACTATGTGTCAAACACACAAGACTTTCAGGTC TACCACAAATATGTGCTATTTATTAAAGATAATTAATGAAGATATTGTGAAACAGGAACCTGATGGCTACACCACCTGAT GAAGGACAACTATTGAGGATGTTGATTAAACTCATCAATGCCAAGAACACCATGGAAATTGGTGTCTACACTGGTTACTC TCTGCTTTCCACTGCTCTTGCTCTTCCTGAAGATGGAAAGGTACTTATTGAGCCTAATTAGCACATCTAAATCTAATTAA TTAAACTTTAAATTTAACATATCAATCATATATAAAAGCCATGAATATACAATGTAATTAGCTTTTCTTTTTTTTTCATT TATTAGATCTTGGCTTTGGATGTGAACCGTGAATACTATGAATTGGGATTACCCATAATTGAGAAAGCTGGAGTTGCTCA CAAGATTGATTTCAGAGAAGGACCAGCTCTTCCTCTTCTTGATGAACTGCTAGAGGATGTGGGTGTACCATATCTTAATT TTCATTTTCATCTATGCTTTACTAATTAATTTTCAATTTTCACATTGTATAACTAAACCATGTCAATTAATTTTGCAGGA AAATAATAAGGGAACATTTGATTTCATTTTTGTGGATGCTGATAAGGATAACTACATAAACTATCACAAGAGGGTGATTG AGCTTGTGAAGGTTGGGGGTCTAATTGGGTTCGATAACACCTTGTGGTTTGGGTCTATGGTGGCTGCACCAGACGCACCT ATGATGGATTTTGTGAAGCACTATCGTGGTTATGTGATTGAGCTCAACAAATATTTAGCTCATGATTCAAGGATTGAGAT TTGCCAGCTCCCCGTTGGTGATGGGATTACCCTGTGCCGCCGCATCATTTGA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0103100.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTGCCAATAACGGAGAGGAACAACAGCAAAATCAACTCATCGGCCACCAAGATCTAGCTCATAAGAGTCTCCTTCA GAGTGATGCACTCTATCAGTATATACTTGAAACCAGTGTGTTTCCCAGAGAGCATGAAAGCTTGAAGGAGCTTCGTGAGA TGACAGAAAAACACCCTCGGAACCTGATGGCTACACCACCTGATGAAGGACAACTATTGAGGATGTTGATTAAACTCATC AATGCCAAGAACACCATGGAAATTGGTGTCTACACTGGTTACTCTCTGCTTTCCACTGCTCTTGCTCTTCCTGAAGATGG AAAGGCTGGAGTTGCTCACAAGATTGATTTCAGAGAAGGACCAGCTCTTCCTCTTCTTGATGAACTGCTAGAGGATGAAA ATAATAAGGGAACATTTGATTTCATTTTTGTGGATGCTGATAAGGATAACTACATAAACTATCACAAGAGGGTGATTGAG CTTGTGAAGGTTGGGGGTCTAATTGGGTTCGATAACACCTTGTGGTTTGGGTCTATGGTGGCTGCACCAGACGCACCTAT GATGGATTTTGTGAAGCACTATCGTGGTTATGTGATTGAGCTCAACAAATATTTAGCTCATGATTCAAGGATTGAGATTT GCCAGCTCCCCGTTGGTGATGGGATTACCCTGTGCCGCCGCATCATTTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0103100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAANNGEEQQQNQLIGHQDLAHKSLLQSDALYQYILETSVFPREHESLKELREMTEKHPRNLMATPPDEGQLLRMLIKLI NAKNTMEIGVYTGYSLLSTALALPEDGKAGVAHKIDFREGPALPLLDELLEDENNKGTFDFIFVDADKDNYINYHKRVIE LVKVGGLIGFDNTLWFGSMVAAPDAPMMDFVKHYRGYVIELNKYLAHDSRIEICQLPVGDGITLCRRII
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10509
10 229 220 6.6E-130 –
PANTHER
PTHR10509:SF63
10 229 220 6.6E-130 –
Gene3D
G3DSA:3.40.50.150
13 108 96 4.7E-29 –
ProSiteProfiles
PS51682
24 228 205 45.552
IPR002935
SUPERFAMILY
SSF53335
28 227 200 6.79E-35
IPR029063
Pfam
PF01596
108 228 121 3.0E-50
IPR002935
Gene3D
G3DSA:3.40.50.150
109 229 121 3.2E-37 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0103100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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