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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0103800 |
| Transcript ID | LotjaGi4g1v0103800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Caffeoyl-CoA O-methyltransferase; TAIR: AT4G34050.3 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9SWB8|CAMT2_EUCGL Caffeoyl-CoA O-methyltransferase 2; TrEMBL-Plants: tr|I1LHD2|I1LHD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0103800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:14403135..14404621) extracted from Lotus japonicus Gifu genome v1.2.
GAGGAACAACAAAACCAATTCAATGGCCACAAAGATCTCCCTCGTAAGAGTCTCCTTCAGAGTGATGCACTCTATCAGGT CCTCTCCAACATTTGCATTTTGTCTCAACATTGGTTATTATTAGATCTTAATAAATTGCGGTTAGATAATAGTTATTGTT GTTTAATATGGTTGATCACAATGCGGATATCTTTTAAATCTTAACAATATGCAATTGCAGTGGTAGATTGCAATTTGAAA CCTTGATTAATACCATTTTTGCTACTCTGTTTTTCACATTGGCTTAACATATGTACAACTAGTGCAGTATATACTTGAAA CAAGTGTCCATCCCAGAGAGCATGCCAGCTTGAAGGAGCTGCGTGAGATGACAGAAAAACACCCTGGGTATGGTCATGGT TATTCTCCCTCATCAATTCAACATATAAATTATGTCAATCAATTTCATACATGGTTGTAGAATATATGTGTTATTAATGC CAATTTTTAATTAATTTACAAGATGTTGTGTAAAACAGGAACATGATGGCTACGCCACCTGACGAAGGACAACTATTAAG GATGTTAATAAAGCTCATCAACGCCAAGAACACAATGGAAATCGGTGTCTACACTGGCTACTCTCTGCTCTCCACTGCCC TCGCTCTTCCCGAAGATGGAAAGGTAACTTCTTCTTATTGAGATTAACTAGCACATCTATATATAATTAGTTAAACTTTA AATTTTACCTATCAATTATAAAAGTCATGAATAATGTAATTAACTTTTTTTTTTTCCTTTTATTAGATCTTGGCTTTGGA TATGAACCGCGAATACTATGATTTGGGATTACCCATAATTGAGAAAGCTGGAGTGGCTCACAAGATTGACTTTAGAGAAG GACCCGCCCTTCCTCTTCTTGACAAACTACTTAGGGATGTGCGTGTATCATACCTTATTTTTCTTTTTTTCTTTTTTATC TATGTTTTACTAATTAATCATTAAAAAGATTGTGTGTTTAATTCTCATTGTTGATATGGGTGTTGTGTTAGCGAGCGATT CGTAAGTACCTCTATAAGTGACTAATGATCTCGGAGGCATGCTCTAACCTGTAATGGTGACCGGAGTCGAACTCACCCAA ACTTTTTTTAGTAAAAACAAATTAATAAATTGTTTATGATCCTTGGCATGACTAAAGCGTGTCATTTTTGCAGGAAAATA ATAAAGGAACATTCGATTTCATTTTTGTGGACGCTGATAAGGATAACTACTTGAAATACCACAAGAGGGTGATTGAGCTT GTGAAGGTTGGGGGGTTGATCGGGTACGACAACACCCTATGGAATGGATCTGTGGCGGCCCCACCTGATGCGCCTCTTAA GGATTACATCAAGCATTATCGCGATTATGTGCTTGAGCTCAACAAGTATCTGGCTCTTGATTCTAGGATTGAGATTTGCC AGCTCTCTGTGGGTGATGGGATTACCTTGTGTCGCCGCATCATGTAA
CDS sequence (LotjaGi4g1v0103800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAGAAAAACACCCTGGGAACATGATGGCTACGCCACCTGACGAAGGACAACTATTAAGGATGTTAATAAAGCTCAT CAACGCCAAGAACACAATGGAAATCGGTGTCTACACTGGCTACTCTCTGCTCTCCACTGCCCTCGCTCTTCCCGAAGATG GAAAGGCTGGAGTGGCTCACAAGATTGACTTTAGAGAAGGACCCGCCCTTCCTCTTCTTGACAAACTACTTAGGGATGAA AATAATAAAGGAACATTCGATTTCATTTTTGTGGACGCTGATAAGGATAACTACTTGAAATACCACAAGAGGGTGATTGA GCTTGTGAAGGTTGGGGGGTTGATCGGGTACGACAACACCCTATGGAATGGATCTGTGGCGGCCCCACCTGATGCGCCTC TTAAGGATTACATCAAGCATTATCGCGATTATGTGCTTGAGCTCAACAAGTATCTGGCTCTTGATTCTAGGATTGAGATT TGCCAGCTCTCTGTGGGTGATGGGATTACCTTGTGTCGCCGCATCATGTAA
Protein sequence (LotjaGi4g1v0103800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTEKHPGNMMATPPDEGQLLRMLIKLINAKNTMEIGVYTGYSLLSTALALPEDGKAGVAHKIDFREGPALPLLDKLLRDE NNKGTFDFIFVDADKDNYLKYHKRVIELVKVGGLIGYDNTLWNGSVAAPPDAPLKDYIKHYRDYVLELNKYLALDSRIEI CQLSVGDGITLCRRIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 55 | 55 | 2.0E-102 | – | |
| Gene3D | 1 | 55 | 55 | 8.8E-16 | – | |
| PANTHER | 1 | 55 | 55 | 2.0E-102 | – | |
| ProSiteProfiles | 1 | 175 | 175 | 40.763 | ||
| SUPERFAMILY | 3 | 174 | 172 | 4.65E-30 | ||
| PANTHER | 55 | 176 | 122 | 2.0E-102 | – | |
| PANTHER | 55 | 176 | 122 | 2.0E-102 | – | |
| Pfam | 55 | 175 | 121 | 4.7E-51 | ||
| Gene3D | 56 | 176 | 121 | 3.5E-38 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | O-methyltransferase activity | Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule. |
Expression pattern of LotjaGi4g1v0103800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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