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LotjaGi4g1v0103900.10

Overview

Field Value
Gene ID LotjaGi4g1v0103900
Transcript ID LotjaGi4g1v0103900.10
Related isoforms 9
Lotus japonicus genome version Gifu v1.2
Description Nicotinate phosphoribosyltransferase-like protein; TAIR: AT2G23420.1 nicotinate phosphoribosyltransferase 2; Swiss-Prot: sp|Q84WV8|NPRT2_ARATH Nicotinate phosphoribosyltransferase 2; TrEMBL-Plants: tr|I3T0X6|I3T0X6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0103900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:14489599..14492401) extracted from Lotus japonicus Gifu genome v1.2.

CTGTGCAGATATAAAGCAGTTGGCATTAGATTGGATTCTGGTGACCTTGCATATTTGTCTTGTGAGGCCAGGAAATTTTT TTGCTCGATTGAGAAGGAATTTGGAATGCCTGGATTTGGGAGGTTGGTAATCACTGCTAGTAATGACCTCAATGAGGAAA CAATTGATGCTTTAAACAAACAGGTAGCTATTTATTGCAGACTCGAACTTGTAATTTTTTGCCTACTGATTCACAGTCAG CCTAACAATTGAGCAGTGTCTAAGATTGCCACCTTGTGTTTATGTGTGCGTGCAACCGTGCACGCATCGTTTAATTTCCG TATGAAATAAAAGATCTTTTATTGAAACTATTAAACCTGGTTTGTTGGTTTATTATAAATTTTAATTTTTGAGTTTCTCA TATATTCATTTACATCTATGCTAATATATTTATATCAAAACTTATCTTCTGTGTTTGATGATCTCTCCTTCCTGGTATAT AAAATATGGATCTCAAAATTTAGTATACTGTGTTTAGTTATTGGAATACTTCTCATCCTCTAAAGGAAATAAAATAAAGA TAACTAATAGACAAACGTGTAGTTGGCAGAGAAAATTAGAGATTGGAACTTTACATTTTATTAAATTGACACGGTTAGCA TGCATGTCAAGATACTAGTGTGCATGAAATTCTGGAATAGAAAACTAACAGGATGTTTATATTGGTTCACATATTTGTTT ACCACTAAAATCTATGATATGTTTGGGGTGTATTGCCTCCCATATTGCAGTTTGGTGGGGTATACATACATGATACATCA CATTACTCCTCCTGCTTGAGGGGTAGTGGGTAACTGATCTTCTGTATGCATGTAACATGGTGTCTTACCTTGTCATAACA TTAATCATTACATTTAAGTATTGGTGCTTAAAATGGAAAAGATAACACGACATGATTTTACTGGATGATGTCACAAAACT CAGGTTAGTTTAAATAACCCCTAGTTCTTTAACCATAGGACCTGGCAGAGTGTAGCGAAGTTGGTCTTTTGTCCAAAAAT AAATTATTAAAACGTCTAGAACTGTTTCCCGAGAGCTAGTTTACATGAAAGGTGACAAAGACAAATCCTACTATGGTACT GCTAACTTATTGGACAGAAAAATTTAAATATTTTTCTTAGCATTATTTTCTAATTGTCTTAGAACATGTTCATGTCATGT TGGAATTTCTTATACACAAACGGTTAATTTTTTAGTGCCAAGGCTTACAATTGTTATACCCTTTTCATTGGATTGCGTTT TCTCTGTAGGGTCATGAAGTTGATGCCTTTGGTATTGGTACATACCTGGTCACATGTTATGCTCAAGCTGCCTTAGGTGT TGTTTTCAAGCTGGTTGAAATCAATAATCAGCCTCGTATTAAACTTTCTGAAGATGTGTCAAAGGTTTAAACATTCTAAA CTAGACATGATATTACAATCATCTTTGTGGTATTTAATTATCTATGTTTGTTTCTTTCTCTGTATTAGGTCTCTATTCCA TGTAAGAAGCGAAGTTATAGGTTGTATGGGAAAGAAGGTTATCCCCTGGTAGACATAATGACTGGAGGAAATGAACCCTC TCCAAAGGTATTATTTTCACATTATTCTCTCATCTTCTTGCTTTTACTATGTCATGTTTCAAGCCTATTGGCTACGTCTT GCTTCCAAATGAGTTGGTTTTCTGTAGTTAACAAATCCTGCCAGAAAAATGAATTTACCATATTTTATTTATAGGTGGGA GAAAGAATCCTGTGCCGTCATCCCTTTCAAGAATCCAAGAGAGCATATGTGGTGCCACAGCGTGTTGAGGAGCTTCTAAA ATGTTACTGGCCTGGGAGTTCAGGTGAGAACTAGCAACAAAGTTTAATAGCAATCATGTATATCAATAGTAACCATCATT TGTTTGATTAGGCTTTGTTTGGGAGTTTTTAGGGGAGGGGAGGCATAGGCTTAGGGAAGGGAGAGTAAGTCCTCCCCTTC TTTGGAAATTTAAATTCAACAAAACCACCCAATTTGGGAGAACTCAACAAAATAACTGAAGGAGGGTCTTGAAGGGCTTA CAAAAATTCCTCAAACCCTTCCCTCTCTTTTAAAAAACTCACAAGGGGAGGGCTTCTCATTTCGCTTCTCTTCCTTCCAA AATCCAACTCACAAACAACTTTAGGGAAGTGGAAACTGCTGCATCGATTTTAAGAACATCCCATGATTCATTGTCAACCA ACCGTTAATATTTTTTGTAGCTTAAGAACCTGTTGCCTTATCCCCCTTTAAACCAAGAAAACAAAGATGTTATCTCACCT GTAACTGCTATGTTTACAAACTACGAGTTCCTGCATGAAATGATTATATCATATATGTCATCAGATAGTCAAAGTTGCAC TTAGGAACAATGGAGTATATAAAGGGGCTTACCAGCATTTATAAGCTATTTATACATTCACTGAATGCAGCTTATGACCA ATAGTTTTTACTATTATTTTGTAACCTGCTTTTTTTCCTTTTGGAAGATAAAAAGAGAGAACCCTTACCAACTCTAAACG AGATTAGAGAGCGGTGCATCAACCAAATTGAGCAAATGAGACCTGACCACTTGAGGAGACTCAACCCAACTCCATATAAG GTCACAAAGTTATACCTTGCTCTTATATTACCCCATTGTTATCATCTTGAATAATTTTACTCATTTTTTTTCTTCTAATA AGCAGGTTAGTGTAAGTGCAAAATTATATGAATTCATTCATTTCTTGTGGCTCAATGAGGCACCAGTTGGGGAGCTGCAG TAA 

CDS sequence (LotjaGi4g1v0103900.10) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCCTGGATTTGGGAGGTTGGTAATCACTGCTAGTAATGACCTCAATGAGGAAACAATTGATGCTTTAAACAAACAGGG TCATGAAGTTGATGCCTTTGGTATTGGTACATACCTGGTCACATGTTATGCTCAAGCTGCCTTAGGTGTTGTTTTCAAGC TGGTTGAAATCAATAATCAGCCTCGTATTAAACTTTCTGAAGATGTGTCAAAGGTCTCTATTCCATGTAAGAAGCGAAGT TATAGGTTGTATGGGAAAGAAGGTTATCCCCTGGTAGACATAATGACTGGAGGAAATGAACCCTCTCCAAAGGTGGGAGA AAGAATCCTGTGCCGTCATCCCTTTCAAGAATCCAAGAGAGCATATGTGGTGCCACAGCGTGTTGAGGAGCTTCTAAAAT GTTACTGGCCTGGGAGTTCAGATAAAAAGAGAGAACCCTTACCAACTCTAAACGAGATTAGAGAGCGGTGCATCAACCAA ATTGAGCAAATGAGACCTGACCACTTGAGGAGACTCAACCCAACTCCATATAAGGTTAGTGTAAGTGCAAAATTATATGA ATTCATTCATTTCTTGTGGCTCAATGAGGCACCAGTTGGGGAGCTGCAGTAA 

Protein sequence (LotjaGi4g1v0103900.10) extracted from Lotus japonicus Gifu v1.2 Proteins.

MPGFGRLVITASNDLNEETIDALNKQGHEVDAFGIGTYLVTCYAQAALGVVFKLVEINNQPRIKLSEDVSKVSIPCKKRS YRLYGKEGYPLVDIMTGGNEPSPKVGERILCRHPFQESKRAYVVPQRVEELLKCYWPGSSDKKREPLPTLNEIRERCINQ IEQMRPDHLRRLNPTPYKVSVSAKLYEFIHFLWLNEAPVGELQ 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 2 203 202 2.3E-129
PANTHER 2 203 202 2.3E-129
SUPERFAMILY 3 199 197 2.55E-51
Gene3D 21 198 178 2.2E-58
Pfam 77 188 112 1.1E-35

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Nicotinate-nucleotide diphosphorylase (carboxylating) activity Catalysis of the reaction: CO(2) + diphosphate + nicotinate D-ribonucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + 2 H(+) + quinolinate.
Biological process NAD biosynthetic process The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0103900.10, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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