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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0103900 |
| Transcript ID | LotjaGi4g1v0103900.9 |
| Related isoforms 9 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nicotinate phosphoribosyltransferase-like protein; TAIR: AT2G23420.1 nicotinate phosphoribosyltransferase 2; Swiss-Prot: sp|Q84WV8|NPRT2_ARATH Nicotinate phosphoribosyltransferase 2; TrEMBL-Plants: tr|Q6XQM5|Q6XQM5_MEDTR Nicotinate phosphoribosyltransferase-like protein; Found in the gene: LotjaGi4g1v0103900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:14487872..14492401) extracted from Lotus japonicus Gifu genome v1.2.
GTATTTTCCACATTTGATTTATCTATTTCTCTAGATGATTACATTTGCATTTATTGACAGGTGATGAGAAGTGGAATCCC TAATTTCTGTGCAGTTGCATTAGCTCTCAATGATTTAGGGTATGTCAGGAAACATTTCTGTTATTATCACTTGATTAGAG GTTTTACATGACTATGATTTTTTATTCTTTTATGTAATAATGTTCATTTTCTAGTTGATTTTTTGGTCTATGGATACAAT GTTTTGTTCTGTTTCTTTTTGTGCAAATGAAACAATGAATGAGAAATGATATGCTGTGGGAGTATTGGCAGAGATGCTGT ACAAGGAATTAATGGCAATAGAAACTGATAGTAGCAGTCTGGAATCTGGATGCAGTAGCATCCTCCATACTGTTGATTAG GATCTACTTGATGCTGTATCTGTTAGGACAGAAGATGCTGGGAAATAGTTAAGGATAGATACTAGATAGAGAAGTTATTT AGAGAGAATTAATGGTTGAGGGATTCATTCAAAGAATTTAGGAAGCTGTGTGAAAGGGGAACCTTTTAGTGCAAGGGAAA CTCTTGGAGGAGAATTCTTTCTCTTATTCTAGAACATTCAATTACTCGCTATTCAGACATGGGTGTATAAGGGGTGAAAA AAGCTGTGGATCAGATATCATCAAAATCCAGCTCCCCTGACACTTTCCTGCCAAGAAACAGAGGAGCTCAGTAGCTTCCT TGTGATGAGTGTGTCAGAAGACAGGAAGAAGAGAGATGTTTTCATTTTTCAATGTGGCCAACCTCTTTGCCCCAACTTCC CAGAAAATGTATGACGTTTATGATCTTGGTAGAATATGAACAAGTCGGCGAGAACGGGAACATTGCCCTAATTCAACAAG AATTATCGTGCAATGGGAATCCCTCAAGTTGGAATTTCCCTCGGGTGTGGGGGGGGGGAGGTTGATATTGTTAGGCTGGA AAGTTGGAACAGAAGATAAGGATAAAATTGTTATGGTCTGTTAGGGCAATTAGTCAATTAGTTAGTTGGGAGTATTAACT AGATGAATAGTTGGAATCAGGGTGGAGTCATTCAGAAATTTAGAAGGTTGTGTAATAGGGAAACGTTTTGGTGAAGGGGA AACACGTCTGGAGGACAATTCTTTCTTCTATTCTCAATCATTCTAAGATTGTTCTTTAACTTCATTTCTATGTATTTCTC ATTTCTCTTTTTCCAGGTTCCAATCACTAACAGAACTCATTAGTCATTACTCATTACATTAGGTGCAAGTTCCTTGTTTT TTAGTTAAGGGTTACTTCAAATTTTTCTTGAAAATGTTTTTTTATGGGCTTGCTTCCTTGAACTGCTTTCTCAACTATTA GCTAAAATACCCCTACCAAAAAAAAAACTATTAGCTAAAATACTATATTTTTGCATTTTCTTAGTGTTCCGTTGTGCAGT TTGTCTGTATTTTGTTGCATACATTGTCGATATTATGAAACCTTTATCCATGTTAGATTGTGTGTTTGCTATGATGTTAT TCTCAATTTAAAGATTGCAGCAGCATGTTGGTAATTTACTGTAGTGTCTCTTCGTACATGCATTACATTAAGCTGAAAAA TTATAATGATTGTTGGATTCAACCAGTCTTGTAGCACCCTCCCTGCTCATCCTCAAAAGTCTAGAGAAAACATCATCCTT CTCAAAGAATCACTTATTTTCTATTAATTGCTGACTTAGATGATGTCCTGTGCAGATATAAAGCAGTTGGCATTAGATTG GATTCTGGTGACCTTGCATATTTGTCTTGTGAGGCCAGGAAATTTTTTTGCTCGATTGAGAAGGAATTTGGAATGCCTGG ATTTGGGAGGTTGGTAATCACTGCTAGTAATGACCTCAATGAGGAAACAATTGATGCTTTAAACAAACAGGTAGCTATTT ATTGCAGACTCGAACTTGTAATTTTTTGCCTACTGATTCACAGTCAGCCTAACAATTGAGCAGTGTCTAAGATTGCCACC TTGTGTTTATGTGTGCGTGCAACCGTGCACGCATCGTTTAATTTCCGTATGAAATAAAAGATCTTTTATTGAAACTATTA AACCTGGTTTGTTGGTTTATTATAAATTTTAATTTTTGAGTTTCTCATATATTCATTTACATCTATGCTAATATATTTAT ATCAAAACTTATCTTCTGTGTTTGATGATCTCTCCTTCCTGGTATATAAAATATGGATCTCAAAATTTAGTATACTGTGT TTAGTTATTGGAATACTTCTCATCCTCTAAAGGAAATAAAATAAAGATAACTAATAGACAAACGTGTAGTTGGCAGAGAA AATTAGAGATTGGAACTTTACATTTTATTAAATTGACACGGTTAGCATGCATGTCAAGATACTAGTGTGCATGAAATTCT GGAATAGAAAACTAACAGGATGTTTATATTGGTTCACATATTTGTTTACCACTAAAATCTATGATATGTTTGGGGTGTAT TGCCTCCCATATTGCAGTTTGGTGGGGTATACATACATGATACATCACATTACTCCTCCTGCTTGAGGGGTAGTGGGTAA CTGATCTTCTGTATGCATGTAACATGGTGTCTTACCTTGTCATAACATTAATCATTACATTTAAGTATTGGTGCTTAAAA TGGAAAAGATAACACGACATGATTTTACTGGATGATGTCACAAAACTCAGGTTAGTTTAAATAACCCCTAGTTCTTTAAC CATAGGACCTGGCAGAGTGTAGCGAAGTTGGTCTTTTGTCCAAAAATAAATTATTAAAACGTCTAGAACTGTTTCCCGAG AGCTAGTTTACATGAAAGGTGACAAAGACAAATCCTACTATGGTACTGCTAACTTATTGGACAGAAAAATTTAAATATTT TTCTTAGCATTATTTTCTAATTGTCTTAGAACATGTTCATGTCATGTTGGAATTTCTTATACACAAACGGTTAATTTTTT AGTGCCAAGGCTTACAATTGTTATACCCTTTTCATTGGATTGCGTTTTCTCTGTAGGGTCATGAAGTTGATGCCTTTGGT ATTGGTACATACCTGGTCACATGTTATGCTCAAGCTGCCTTAGGTGTTGTTTTCAAGCTGGTTGAAATCAATAATCAGCC TCGTATTAAACTTTCTGAAGATGTGTCAAAGGTTTAAACATTCTAAACTAGACATGATATTACAATCATCTTTGTGGTAT TTAATTATCTATGTTTGTTTCTTTCTCTGTATTAGGTCTCTATTCCATGTAAGAAGCGAAGTTATAGGTTGTATGGGAAA GAAGGTTATCCCCTGGTAGACATAATGACTGGAGGAAATGAACCCTCTCCAAAGGTATTATTTTCACATTATTCTCTCAT CTTCTTGCTTTTACTATGTCATGTTTCAAGCCTATTGGCTACGTCTTGCTTCCAAATGAGTTGGTTTTCTGTAGTTAACA AATCCTGCCAGAAAAATGAATTTACCATATTTTATTTATAGGTGGGAGAAAGAATCCTGTGCCGTCATCCCTTTCAAGAA TCCAAGAGAGCATATGTGGTGCCACAGCGTGTTGAGGAGCTTCTAAAATGTTACTGGCCTGGGAGTTCAGGTGAGAACTA GCAACAAAGTTTAATAGCAATCATGTATATCAATAGTAACCATCATTTGTTTGATTAGGCTTTGTTTGGGAGTTTTTAGG GGAGGGGAGGCATAGGCTTAGGGAAGGGAGAGTAAGTCCTCCCCTTCTTTGGAAATTTAAATTCAACAAAACCACCCAAT TTGGGAGAACTCAACAAAATAACTGAAGGAGGGTCTTGAAGGGCTTACAAAAATTCCTCAAACCCTTCCCTCTCTTTTAA AAAACTCACAAGGGGAGGGCTTCTCATTTCGCTTCTCTTCCTTCCAAAATCCAACTCACAAACAACTTTAGGGAAGTGGA AACTGCTGCATCGATTTTAAGAACATCCCATGATTCATTGTCAACCAACCGTTAATATTTTTTGTAGCTTAAGAACCTGT TGCCTTATCCCCCTTTAAACCAAGAAAACAAAGATGTTATCTCACCTGTAACTGCTATGTTTACAAACTACGAGTTCCTG CATGAAATGATTATATCATATATGTCATCAGATAGTCAAAGTTGCACTTAGGAACAATGGAGTATATAAAGGGGCTTACC AGCATTTATAAGCTATTTATACATTCACTGAATGCAGCTTATGACCAATAGTTTTTACTATTATTTTGTAACCTGCTTTT TTTCCTTTTGGAAGATAAAAAGAGAGAACCCTTACCAACTCTAAACGAGATTAGAGAGCGGTGCATCAACCAAATTGAGC AAATGAGACCTGACCACTTGAGGAGACTCAACCCAACTCCATATAAGGTCACAAAGTTATACCTTGCTCTTATATTACCC CATTGTTATCATCTTGAATAATTTTACTCATTTTTTTTCTTCTAATAAGCAGGTTAGTGTAAGTGCAAAATTATATGAAT TCATTCATTTCTTGTGGCTCAATGAGGCACCAGTTGGGGAGCTGCAGTAA
CDS sequence (LotjaGi4g1v0103900.9) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAAGTGGAATCCCTAATTTCTGTGCAGTTGCATTAGCTCTCAATGATTTAGGATATAAAGCAGTTGGCATTAGATT GGATTCTGGTGACCTTGCATATTTGTCTTGTGAGGCCAGGAAATTTTTTTGCTCGATTGAGAAGGAATTTGGAATGCCTG GATTTGGGAGGTTGGTAATCACTGCTAGTAATGACCTCAATGAGGAAACAATTGATGCTTTAAACAAACAGGGTCATGAA GTTGATGCCTTTGGTATTGGTACATACCTGGTCACATGTTATGCTCAAGCTGCCTTAGGTGTTGTTTTCAAGCTGGTTGA AATCAATAATCAGCCTCGTATTAAACTTTCTGAAGATGTGTCAAAGGTCTCTATTCCATGTAAGAAGCGAAGTTATAGGT TGTATGGGAAAGAAGGTTATCCCCTGGTAGACATAATGACTGGAGGAAATGAACCCTCTCCAAAGGTGGGAGAAAGAATC CTGTGCCGTCATCCCTTTCAAGAATCCAAGAGAGCATATGTGGTGCCACAGCGTGTTGAGGAGCTTCTAAAATGTTACTG GCCTGGGAGTTCAGATAAAAAGAGAGAACCCTTACCAACTCTAAACGAGATTAGAGAGCGGTGCATCAACCAAATTGAGC AAATGAGACCTGACCACTTGAGGAGACTCAACCCAACTCCATATAAGGTTAGTGTAAGTGCAAAATTATATGAATTCATT CATTTCTTGTGGCTCAATGAGGCACCAGTTGGGGAGCTGCAGTAA
Protein sequence (LotjaGi4g1v0103900.9) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRSGIPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFCSIEKEFGMPGFGRLVITASNDLNEETIDALNKQGHE VDAFGIGTYLVTCYAQAALGVVFKLVEINNQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGGNEPSPKVGERI LCRHPFQESKRAYVVPQRVEELLKCYWPGSSDKKREPLPTLNEIRERCINQIEQMRPDHLRRLNPTPYKVSVSAKLYEFI HFLWLNEAPVGELQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 254 | 254 | 1.8E-164 | – | |
| PANTHER | 1 | 254 | 254 | 1.8E-164 | ||
| Gene3D | 2 | 91 | 90 | 5.3E-62 | ||
| SUPERFAMILY | 2 | 250 | 249 | 1.24E-65 | ||
| Pfam | 23 | 123 | 101 | 5.9E-5 | ||
| Gene3D | 92 | 238 | 147 | 5.3E-62 | – | |
| Pfam | 128 | 239 | 112 | 1.9E-35 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Nicotinate-nucleotide diphosphorylase (carboxylating) activity | Catalysis of the reaction: CO(2) + diphosphate + nicotinate D-ribonucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + 2 H(+) + quinolinate. | ||
| Biological process | NAD biosynthetic process | The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH. |
Expression pattern of LotjaGi4g1v0103900.9, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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