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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0106900 |
| Transcript ID | LotjaGi4g1v0106900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | transcription factor, putative (Protein of unknown function, DUF547); TAIR: AT4G37080.1 ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547); Swiss-Prot: sp|Q9PKI0|RPIA_CHLMU Ribose-5-phosphate isomerase A; TrEMBL-Plants: tr|K7KNT4|K7KNT4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0106900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:14982402..14986512) extracted from Lotus japonicus Gifu genome v1.2.
TTGCAGGTGGATAAGTTGAAGAGGAAGCTCAGACATGAAGAGAATGTACATAGAGCCTTAGAAAGAGCATTCACAAGACC TCTGGGATCCCTACCTCGTCTTCCTCCTTATCTTCCTCCATATGTAAGTATTTTTCTCTTCAATGTTGTTCCTGGCAATG ACTTAGAATGTTTTTGTATAAATGTTGGGTGAATGTAAACAGACATTTCTTCAATCCAACCCTTCACATCCGTTAGCTTT TATGCCTTAGAATGTGCGCGAATGTGCTTTGGGGACTTTCCCAATAAAAATCAAACAGAGTCGAATTCATAGTTTCAGTG AAGTTTTTTTCTTGATTTTACTTGTATTTTCTGTTTTTGTCTTCCTCCACATGTTACATGTTAGTATGTATCTCTTCGTG CATTTTTTAATACACGATGAAGCCAAAATCACCGTGGACTGTCATAAAAGCTAAAGAAAGTTGTTTCCTGTCCACCGTGA TTTTGACTCACTATGATTTTTCACCATATACCCAAACATGCACTTATGTTGTGTTTGGCAATGAGTTCATGGTAACTGAA TTGTAGTACTAGTGAGGTTTTTCTTCATTTTTGTAGTTTTTTTTTGTTTTTGTCTTTTCTGGGTCCTGGATGATAACTAA CTAGTACTGTTACTGTGTGTGGTTATTTTAGACATTGGAGCTTCTAGCTGAAGTAGCAGTGTTGGAGGAGGAAGTGGTTA GACTTGAAGAGCAGGTTGTGAATTTTAGACAAGGTTTATATCAGGAAGCAGTGTACATTTCCACAAAAAGGAATGCAGAG AATTTGAGTGACCCTATTGACCAAACCCCTATTAGGAGTTCCAAGCACCAGAGATCAAAATCCATGTCCCAAAGTGAGTT TAATTCAACTATGATAACAACAAGGTTGCCTCAGCCTTCTCTAGCCAGAAGTGCTTCCAGCAGAAAGCTGTTATTCTCCT CTGATACTGTCACTGATCAAACTGCTGGGAAGCTAGCTCATGGGAAGCAATTGCACAGAAAGCAAGATTCATTCTCTTCT ATCCCAGAAGAGGGAAGGGGAAAGGAGAATAGGTCATCTAGCAACTTAGTGAAAGATAAGCAATCTCCAGAAAAGAAACT GGGTAAAATCATTACTCCAGTAAAGAGGTCTCCATTCAAACAAGAATCAGCTGAGAAGAGCTTGGATCACTTGAAGTTGC AGGTAAATTGTAACCTCACAAACAAAATTTTCAACAGTTCTGTAAAATTTGATTATGGTCCCTACCTTCTATGATTTTGG TCTCTACTTTTAGTTTTTTGCCTATAACTTTAGTTTCAGTTCTTTCTTTATAATCCCACTGCTAATTGGTGATATGGCTA ACAGAAAGCACATCACCATTCCCACGTGTCAGAGTAATCTTATATAACGTATTTTATTGTGATGAAAGATATGATAGCTA ACACTTTTAATATGTCACATGGGATTGTTCGGGACATATGGCAATGGTGATGTGATCCTCCATTAGCCACATCACCCGTT AACCGTGAAATATTATAAAATGATGACTTAAACCTAAGTTTTTTTTTTTTTACTAAAGTAGGGACTAAAACCATAAAAAT GGGACCAAAAACTTGTTTAAGCCTTTCAATAATTATTAGTTAGTATGTGATATGATCATATGAGTACTGTACTGTCATTT CATCACTGTTTTCCCTTTTTCTTGCCCAGTTGGATTGGAGATTATCAGAGCAGGAAAGGGCACAGACTTCATCAAGTTCA TCAGATGATAAAGTGTCAGAAGTTGATAGCACGCCCAATAGAGTTTCAGAGGATCTTGTGAAATGCTTGTCTAGCATATT CATGAGAATTAGCACATCCAAGGACAAATTTGGGGAATCTAAGACGCCTTCGCGCTTCATATCAGCATTGAACCAATGCA GCAAGGAAAAGGATCAGTTCTGTGATCCTTATGGTATCTGTTCAGAATCTAAAACAAGAGAAGTTGGCCCTTATAAGAAT GTATGTGAAGTTAAAGCCGCCACGGTTGATTTCAACAGAACAACAAATGCAGTGTTTCTAATCCACAGATTAAAGTAAGT TGTAGATGCATACTAGTTGTTGGTTAATGATATATGGATATCTATCTAACCTTGCAGACATATTCAGGTTCCTACTTGGG AAACTTGCCTCTTTAAATTTGAAGGGCCTTAATCATCAGGAAAAACTTGCATTCTGGATAAACACTTATAATTCCTGCAT GCTAAATGTAAGACACCTTTCTGCCACTTATTTTAGTTCTAGATTTGAATATTTGATGTCATCCTTATCTTTCCTAAGAT GCAGAGAGTTTGACTTTAACACCTTATTATGGTTTCAATATTGCAGGCATATCTAGAACAAGGCATACCTGAGAGTCCTG AAATGGTTGTAGCACTAATGCAAAAGGTATGATTATCGATATCTAGGCATCATTCACAACATTATCCTTTTATCCTTTTT AACACAAGAACAAGAGTTTGTTTGGTTGACCGCTAAAAGAAATATGAAAATGAGAAAATAACACATACCTAGATACTTTT TGTTGACAAAAAATGCATCAGGATGTGTTATTTTCCCGTTTTCATACTTTCTAATGGTAGACAAACGGATTCTAAAGGTC CAAGTTAACTATGACATGGCAATGACATGTTTCAGGCAATGATAGTAGTGGGGGGCCAGTTGCTCAATGCAATTACAATA GAGCATTTTATCTTGAGACTTCCTTATCATCTGAAGTTTGTAAGTCCAATAATCTTGTCCTTTCTTTGAATTTTCGAGTT TAGACATGATAAAGTTTGAGTATCCTTTTTTTGATTTTTTTTTTGTTTTCCTTTATACTGATGTAATTGTCTTAAAATCA TATTGCAATTAATCCCTTGATTTTCACCTTTGCTTCCTGCGACAGACATGTCCAAAAGCTGCAAAAAATGAAGAGGTGAA AGCACGAAGCATATTTGGCCTGGAATGGTCTGAGCCTTTAGTAACATTTGCACTTTCCTGTGGAAGCTGGTCTTCACCTG CAGTATGTCTTTTGTATCTCTACTTAGCCGACAATATGACTATATTAGACCTGATTTAATTACTTTTGAGCTATAGCTAC CATGTTAGTATGTTACCAACTGGTTTGATAATGTATGACCAAATTAGGTTGTGCTTTGCTATCTGTTTGCACGGCTGCAA ATGGATATTCACACGGAATTTAAGATGAAAACAGTGAATGGAGTTCTTCTGCGGATTGGGTTGAAAATCCGTTAACACTC AACTCGTATTCAAACACACACTTAGAGATGTCATGGATCTTAATTTGGATTCAAAAAATAGCTCAGGGATCTTAATTTCA TTGTGAGAACATTATAGTAATTAAAAAAAACCTAAAACTTTCTTGTTTTAACTTTTCCATCTTTGTCTATTAGGATTAAG GTTTTAAATTACAGTTGCGGTTGCTATTACGGTTATGGTTGCGTTGCGGAATTGCGGACAAATGTAGATTGATGTGGTAG CAATTGTGGTCGTAACGCCAATGCGGGGAGTCCAAATCCCTTTATGTTGCGAACTGCAGTTTAAAGCCTGATTTGGATCA TAACAACATTCAATTTTAACATTATAAAATTTGTTATTGTGAATCCTAAAAGTTTAATCTATAAGGTGATTGAATTGATT TTAATATCTAATGAATATGTTCATATTTATTTCTTGATATATTATCTAATGAATATGTTCATATTTATTTCTTGATATAT TTCCTTTGATTAGTTGCATTGACTAAGCAAGTCTTTTTTTGTTTGAAGGTGAGAGTGTACACAGCATCAAAAGTTGATGA TGAGTTAGAAGCAGCAAAGAGAGACTATTTACAGGCTTCAGTTGGCATTACAGAAACAAACAAGTTAATAATCCCCAAGT TACTGGACTGGTATTTACTAGACTTTGCAAAGGACCTGGATTCTTTATTAGACTGGATCTGCCTCCAACTACCTGACCAA ATAAGAAACCAAGCAGTTAAATGCCTTCAAGAAAGAGGAACAGACTCGGTTTCACAGAGGGTACAAATGATGCCCTATGA TTTCAGTTTCCGGTTGCTTTTACACCAATAA
CDS sequence (LotjaGi4g1v0106900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCCAAAGTGAGTTTAATTCAACTATGATAACAACAAGGTTGCCTCAGCCTTCTCTAGCCAGAAGTGCTTCCAGCAG AAAGCTGTTATTCTCCTCTGATACTGTCACTGATCAAACTGCTGGGAAGCTAGCTCATGGGAAGCAATTGCACAGAAAGC AAGATTCATTCTCTTCTATCCCAGAAGAGGGAAGGGGAAAGGAGAATAGGTCATCTAGCAACTTAGTGAAAGATAAGCAA TCTCCAGAAAAGAAACTGGGTAAAATCATTACTCCAGTAAAGAGGTCTCCATTCAAACAAGAATCAGCTGAGAAGAGCTT GGATCACTTGAAGTTGCAGTTGGATTGGAGATTATCAGAGCAGGAAAGGGCACAGACTTCATCAAGTTCATCAGATGATA AAGTGTCAGAAGTTGATAGCACGCCCAATAGAGTTTCAGAGGATCTTGTGAAATGCTTGTCTAGCATATTCATGAGAATT AGCACATCCAAGGACAAATTTGGGGAATCTAAGACGCCTTCGCGCTTCATATCAGCATTGAACCAATGCAGCAAGGAAAA GGATCAGTTCTGTGATCCTTATGGTATCTGTTCAGAATCTAAAACAAGAGAAGTTGGCCCTTATAAGAATGTATGTGAAG TTAAAGCCGCCACGGTTGATTTCAACAGAACAACAAATGCAGTGTTTCTAATCCACAGATTAAAGTTCCTACTTGGGAAA CTTGCCTCTTTAAATTTGAAGGGCCTTAATCATCAGGAAAAACTTGCATTCTGGATAAACACTTATAATTCCTGCATGCT AAATGCATATCTAGAACAAGGCATACCTGAGAGTCCTGAAATGGTTGTAGCACTAATGCAAAAGGCAATGATAGTAGTGG GGGGCCAGTTGCTCAATGCAATTACAATAGAGCATTTTATCTTGAGACTTCCTTATCATCTGAAGTTTACATGTCCAAAA GCTGCAAAAAATGAAGAGGTGAAAGCACGAAGCATATTTGGCCTGGAATGGTCTGAGCCTTTAGTAACATTTGCACTTTC CTGTGGAAGCTGGTCTTCACCTGCAGTGAGAGTGTACACAGCATCAAAAGTTGATGATGAGTTAGAAGCAGCAAAGAGAG ACTATTTACAGGCTTCAGTTGGCATTACAGAAACAAACAAGTTAATAATCCCCAAGTTACTGGACTGGTATTTACTAGAC TTTGCAAAGGACCTGGATTCTTTATTAGACTGGATCTGCCTCCAACTACCTGACCAAATAAGAAACCAAGCAGTTAAATG CCTTCAAGAAAGAGGAACAGACTCGGTTTCACAGAGGGTACAAATGATGCCCTATGATTTCAGTTTCCGGTTGCTTTTAC ACCAATAA
Protein sequence (LotjaGi4g1v0106900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSQSEFNSTMITTRLPQPSLARSASSRKLLFSSDTVTDQTAGKLAHGKQLHRKQDSFSSIPEEGRGKENRSSSNLVKDKQ SPEKKLGKIITPVKRSPFKQESAEKSLDHLKLQLDWRLSEQERAQTSSSSSDDKVSEVDSTPNRVSEDLVKCLSSIFMRI STSKDKFGESKTPSRFISALNQCSKEKDQFCDPYGICSESKTREVGPYKNVCEVKAATVDFNRTTNAVFLIHRLKFLLGK LASLNLKGLNHQEKLAFWINTYNSCMLNAYLEQGIPESPEMVVALMQKAMIVVGGQLLNAITIEHFILRLPYHLKFTCPK AAKNEEVKARSIFGLEWSEPLVTFALSCGSWSSPAVRVYTASKVDDELEAAKRDYLQASVGITETNKLIIPKLLDWYLLD FAKDLDSLLDWICLQLPDQIRNQAVKCLQERGTDSVSQRVQMMPYDFSFRLLLHQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 104 | 104 | - | – | |
| MobiDBLite | 1 | 42 | 42 | - | – | |
| PANTHER | 22 | 454 | 433 | 1.5E-179 | – | |
| PANTHER | 22 | 454 | 433 | 1.5E-179 | – | |
| MobiDBLite | 48 | 90 | 43 | - | – | |
| MobiDBLite | 121 | 136 | 16 | - | – | |
| MobiDBLite | 121 | 142 | 22 | - | – | |
| Pfam | 247 | 376 | 130 | 6.2E-37 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0106900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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