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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0117100 |
| Transcript ID | LotjaGi4g1v0117100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase family protein, putative; TAIR: AT5G49560.1 Putative methyltransferase family protein; Swiss-Prot: sp|A4FV98|MT21B_BOVIN Protein-lysine methyltransferase METTL21B; TrEMBL-Plants: tr|A0A0S3R493|A0A0S3R493_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0117100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:16961678..16963015) extracted from Lotus japonicus Gifu genome v1.2.
CAAATTTCTTTCTTCGGATTCAAACTTTGCTCTGACCCACCCTTAGAGGAGTTTCACTTGTTTACTACTATACAAACATA TCTTGTTCATATTTTTTATTTTAACTATTGAAATAATTCAATACGTAAATTATTAATGAAATTTTAATTTGGCTTAACTG CACTTTTAAGCCAAATTAAAAGAATAAAGGCAGGGACAGAAAAGTAAAATCATAAACACAGTAGAACGAATATAAACAAG GGCGCCCTAACTCGTCGTCCCCGACGGCGCATCGTAAGGTCAATGCGAGCTATCATGGACGACGACGACGAAGAAATCAA CCCCTTCACCATGCTCCTATCTCACCAACACGAACCAGATGACACCAAACCGAACCTGTTAGCTTCGGCACCACCGAACC AAGAGCTTCTCCAGAAGCACTTCCTCCATTCGATTCAATCAACGGTCCTCATTCGCCTTCTCCCATCCGAGGGCCTCTCC TTCCAGCTCTGGCCCGCCGCCACCTCCCTCGTCTCCCTCCTCGACAGCCACCGCATCAACCCCCTCACCAGCCCCCTCTC CGCCGCCATCCCCGCCACTCCCAAAATCCTCGAGCTCGGCTCCGGCACTGGCATCGTCGGAATCGTCGCCGCCGCCACTC TCGGCTGCAATGTGACCATCACCGACCTCCCTCACGTGGTTCCCAATCTCAGATTCAACGCGGAAGCCAACGCAGGCGTT GTGGGGTCCAGCGGTGGGGCCGTGAATGTTGCGGCGCTGAGGTGGGGCCAGGGTGATGACGTGGAGGAGATTGGTCGGGA GTTCGATGTTATTGTGGCGTCGGATGTAGTGTATCATGATCACCTTTATGAGCCGCTTCTCGAAACGCTGCGTTTAATGA TGTTGGTTGAGAAGGAGCAGGAGAAGAAGAAGAAAATGGTGTTTGTGATGGCTCACATGAGGAGGTGGAAGAAGGAGTCA GTGTTCTTCAAGAAAGCTAGGAAGCACTTTAATGTTGATGTTTTGCATGTTGACACTCCTAGCAATGGTTCTAGAGTTGG TGTTGTTGTTTACCGTTTTGTGGGGAAGGGTTAAGGTTCCAAATTTTCAAGATAGTGTGATTCATAATTCAAGTTTGACA AACACAATTGTAATTTGCAAGTAACATTTGCTTTTTTTGGTTACATTTGGAAAAGAGCAAAGTAACATTTGCTTAGTTTT CTTTATGCTTTTATTTTATTTTTAAGAAACTTTCTAATTTAGGGTCAATGTGTAAAGGAGTGTACTTTGGTTCCTCTCAT CACATTTCTCTCCAACACCTCTCTCTAGCGTATTTTCAGCTATTGATTCCGGTAGGGG
CDS sequence (LotjaGi4g1v0117100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGAGCTATCATGGACGACGACGACGAAGAAATCAACCCCTTCACCATGCTCCTATCTCACCAACACGAACCAGATGA CACCAAACCGAACCTGTTAGCTTCGGCACCACCGAACCAAGAGCTTCTCCAGAAGCACTTCCTCCATTCGATTCAATCAA CGGTCCTCATTCGCCTTCTCCCATCCGAGGGCCTCTCCTTCCAGCTCTGGCCCGCCGCCACCTCCCTCGTCTCCCTCCTC GACAGCCACCGCATCAACCCCCTCACCAGCCCCCTCTCCGCCGCCATCCCCGCCACTCCCAAAATCCTCGAGCTCGGCTC CGGCACTGGCATCGTCGGAATCGTCGCCGCCGCCACTCTCGGCTGCAATGTGACCATCACCGACCTCCCTCACGTGGTTC CCAATCTCAGATTCAACGCGGAAGCCAACGCAGGCGTTGTGGGGTCCAGCGGTGGGGCCGTGAATGTTGCGGCGCTGAGG TGGGGCCAGGGTGATGACGTGGAGGAGATTGGTCGGGAGTTCGATGTTATTGTGGCGTCGGATGTAGTGTATCATGATCA CCTTTATGAGCCGCTTCTCGAAACGCTGCGTTTAATGATGTTGGTTGAGAAGGAGCAGGAGAAGAAGAAGAAAATGGTGT TTGTGATGGCTCACATGAGGAGGTGGAAGAAGGAGTCAGTGTTCTTCAAGAAAGCTAGGAAGCACTTTAATGTTGATGTT TTGCATGTTGACACTCCTAGCAATGGTTCTAGAGTTGGTGTTGTTGTTTACCGTTTTGTGGGGAAGGGTTAA
Protein sequence (LotjaGi4g1v0117100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRAIMDDDDEEINPFTMLLSHQHEPDDTKPNLLASAPPNQELLQKHFLHSIQSTVLIRLLPSEGLSFQLWPAATSLVSLL DSHRINPLTSPLSAAIPATPKILELGSGTGIVGIVAAATLGCNVTITDLPHVVPNLRFNAEANAGVVGSSGGAVNVAALR WGQGDDVEEIGREFDVIVASDVVYHDHLYEPLLETLRLMMLVEKEQEKKKKMVFVMAHMRRWKKESVFFKKARKHFNVDV LHVDTPSNGSRVGVVVYRFVGKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 38 | 261 | 224 | 3.2E-44 | – | |
| PANTHER | 42 | 262 | 221 | 5.3E-85 | – | |
| PANTHER | 42 | 262 | 221 | 5.3E-85 | – | |
| Pfam | 63 | 234 | 172 | 4.5E-28 | ||
| SUPERFAMILY | 96 | 197 | 102 | 2.13E-12 | ||
| CDD | 101 | 197 | 97 | 1.00365E-6 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0117100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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