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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0119600 |
| Transcript ID | LotjaGi4g1v0119600.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Inorganic pyrophosphatase, putative; TAIR: AT1G01050.1 pyrophosphorylase 1; Swiss-Prot: sp|Q93V56|IPYR1_ARATH Soluble inorganic pyrophosphatase 1; TrEMBL-Plants: tr|I3TA08|I3TA08_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0119600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:17241301..17243726) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTAGCAATGAAGAACAAAGTTTCAAGACTTTGGGATTGCCTAATGTTGTGCTGAATGAAAGAATTCTTTCTTCTCT CACTCGGAGAGATTTCGCTGCTCATCCTTGGCATGACTTAGAGATTGGTAAAATCACTTCTCATATGTGTTTCTAATTCC ATCTCATATTTACATTCATTATAATGAATTGATTAATCATTAATACATATTTTCTCTCTTTTATCTTTAAATGGAAATTG AATATTTTGTGCTTCCAGAATCTCTGTTTAGTTTCAACTTTGATTTCATTCAATATTGGGCTGAAAATTACCAATGGTTT CATACATGCAGGGCCAGGAGCTCCATCAATTTTTAATTGTGTAAGTTTTTCTTTCTTTTCTATATGTTTTATTCATGCAT AAAGGTTTAGGGACTTAGGGGGGAAAACCTGTTGTCAAGGTCTATTATTTACATTCCACATTCCTGGTCAGTGCAGGGTA ACCATGACCATGACATGAGTTATTGTTTTGCTGCATTGTTTCTGTGTTATACATACATAAAGCTTAGGGAAGAAAATTAC AATCTTTTGACAATTCTCTTATTTGCATACCAAGTTCCTGCTAAGCATGGTCAATGCCTATCTGGGTTTGGGGCAATTAA TTGCGTTTCTGATCATCCATGGTAAAACATATATACAGTCTTTGTAACTTGTAGTATGTATGGTTTTAAAAGAAGCTTTA ACAGGGACATGGTGCTAATGTGAAACTGAATTAATTAATGGCTTTAGATGATAAATGTGGCACTCAACTAGAATCCTGTT AATGTTTGTTTCTAAGAAATAAAGAGATTTTTGCTATGGCAGGTGGTTGAAATTGGTAAAGGCAGCAAGGTTAAGTATGA GTTGGACAAGGCAAGTGGACTTATAAAGGTATGATTACCATTCTTGATTTAATGGCAAATTAAAGTGTTTTTCTTATAAG GGAATTGTATCCTCAATTACCATTTTTGCATTCATCACCAGAATATTGTCTGCTTTTAAGTTTAAATGCCTTCCAAAACT CTATCACGCTCTCAAAAAAAGAACCCAAATTGTTAGGGGTCATTTGCCTTTGAAAACTCCATAACTTACATGTCTAAGTT CTTAGGAGAAAGATTGTTAATGTTTTATGTTTAGGTTTAAATGGAGTCAATTTTATAAACTGGCAAGATAAAAATGGTAA CTCAAATACTTTCAATGGATGGTGTCCAAATTCTCTGTATTGAGTTATAGGATGCTTCTATGCGATTGTTGTGCTGCTTA ACATAGATAATAGTTTGGTTTCTTGCTGTGAAATATATGTTACTTTGTTCTGAAGCATAACTAATGCATGGGGTGAATAA CTTAGGTTGATCGCATCCTTTACTCATCTGTTGTCTACCCACACAACTATGGTTTTATCCCAAGAACCATTTGTGAAGAC AATGATCCCATGGATGTCCTGGTTCTGATGCAGGTAACAAGTAACAACGCTTCAAAAACTTGTCCATGATATTTGACGGA AATGTCTGTTTTCTTTGAAAAATTCAAACTTAACTTAGATTGAAACTTTTATATTGAGTAGGAGCCTGTGATCCCTGGTT GTTTCCTTCGTGCTCGTGCTATTGGATTGATGCCCATGATTGACCAGGTAAAAGTTGCACCCTACTGCTATATTGAGATT CTAATACGATGTCATAAATCAATTTATTCAGTAAGCCTATGTTGTTAAATTAAGGCACATGAGTGGCTTTTGTGATCTGC TTTGACTTTTTCTCCCTTTTTGTCTTAAGTTGGCTTTCAAAATCATACCATTTGGATGATGCTCTTCTGCTGTAAAATTA ATGCATTTGTAGAGAAAGTATCAAATTAAACGAGTTCTGGTACAGGGAGAGAAGGATGACAAGATCATAGCAGTTTGTGC TGATGACCCTGAGTTCCGTCATTACAAGGACATCAAGGAGCTTCCTCCACATCGGCTTGCTGAAATTAGAAGATTCTTTG AGGACTGTATCCTGTTATATGCATAATTCAAGTCTCTCCTATGTTTTTGTGACCTTTTAAATCCGAATCATAAATTTTGC ACTTTTATCTGTCTCTGCTATCAATAGTGTACTCTCCATGTATGATGTGTGTCCTTAAGCTAGCCACCCTAGACAAGAAG AATGAGAACAAAAAAGTTGATGTGGAAGACTTTCTACCAGCTGAAGCTGCTGTTCAGGCTATCAAATACTCCATGTGAGC TATTTTTCTTTACAATCATGTTGGAGTGAAACTTATATTTCTCACTAGTCTTTCTCGGTTTTACTTTTCAATTGAAGATC AAATGATTCATTTAATATTTAGCCTCACTTTCATTCATGGACTTTCCCCCCTTCCTTTTGCAGGGACCTTTATGCTGCCA GTGTAGTCCAGAGCTTGAGGCAGTGA
CDS sequence (LotjaGi4g1v0119600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAGCAATGAAGAACAAAGTTTCAAGACTTTGGGATTGCCTAATGTTGTGCTGAATGAAAGAATTCTTTCTTCTCT CACTCGGAGAGATTTCGCTGCTCATCCTTGGCATGACTTAGAGATTGGGCCAGGAGCTCCATCAATTTTTAATTGTGTGG TTGAAATTGGTAAAGGCAGCAAGGTTAAGTATGAGTTGGACAAGGCAAGTGGACTTATAAAGGTTGATCGCATCCTTTAC TCATCTGTTGTCTACCCACACAACTATGGTTTTATCCCAAGAACCATTTGTGAAGACAATGATCCCATGGATGTCCTGGT TCTGATGCAGGAGCCTGTGATCCCTGGTTGTTTCCTTCGTGCTCGTGCTATTGGATTGATGCCCATGATTGACCAGGGAG AGAAGGATGACAAGATCATAGCAGTTTGTGCTGATGACCCTGAGTTCCGTCATTACAAGGACATCAAGGAGCTTCCTCCA CATCGGCTTGCTGAAATTAGAAGATTCTTTGAGGACTCTAGCCACCCTAGACAAGAAGAATGA
Protein sequence (LotjaGi4g1v0119600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASNEEQSFKTLGLPNVVLNERILSSLTRRDFAAHPWHDLEIGPGAPSIFNCVVEIGKGSKVKYELDKASGLIKVDRILY SSVVYPHNYGFIPRTICEDNDPMDVLVLMQEPVIPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPP HRLAEIRRFFEDSSHPRQEE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 173 | 168 | 3.2E-109 | – | |
| PANTHER | 6 | 173 | 168 | 3.2E-109 | ||
| Gene3D | 28 | 180 | 153 | 1.4E-63 | ||
| SUPERFAMILY | 28 | 173 | 146 | 1.96E-59 | ||
| CDD | 49 | 172 | 124 | 9.3794E-78 | ||
| Pfam | 52 | 177 | 126 | 2.4E-47 | ||
| ProSitePatterns | 99 | 105 | 7 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | Inorganic diphosphatase activity | Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Phosphate-containing compound metabolic process | The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid. |
Expression pattern of LotjaGi4g1v0119600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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