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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0122900 |
| Transcript ID | LotjaGi4g1v0122900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Amino-terminal oxidoreductase-like protein; TAIR: AT5G17280.1 oxidoreductase-like protein, amino-terminal protein; Swiss-Prot: sp|Q9USH2|YJH2_SCHPO UPF0651 protein P31B10.02, mitochondrial; TrEMBL-Plants: tr|C6T570|C6T570_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0122900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:17746738..17752057) extracted from Lotus japonicus Gifu genome v1.2.
GACACGAAAAAATTCCCAAAACGCGGTTCCCTTGCCTAAAACGGCAGCAAACGATCACAGATTTCAATTGGTCCATAAAT GCAAATAATACTAATACCCCTTCACTCATTCATATTGTGTGGTTCTCAAATCTCAATCCAGAGAGAGATAGAAAGGGCTT AGGTTATGGTAGCGGCGGCATTGACCTTCCATGAGAATCGGAGCCGGCGGTTTGACTCAAAAGATCGCCCCCTTCAACCT CATCGCCGCCCACAATAACCGCAAGCGCCCACCATCATCCTTTCTCCCCCAACCGTATCGCATGGCCGACGGCGCAGGCT CCGCTAATATACCCGCGCCACACCCGATCCAACCCAAACCGGAGAAGAAGGAGATTCCTCCGCCGCCGGAGAAGCCAGAG GCTGGTGATTGTTGCGGCAGCGGATGCGTCCGGTGCGTCTGGGATATCTACTACGACGACCTTGAAGAATACAATAAGCT ATACAAACAGGATAATCCCAGCACCAAACCCTAGTAATCACTTTTTTCCCTTTTGTTTCTTCAACAATGCTCAATTCCAT TGTTTCTTTGTTCTAATATTATGCTGTATGTGTACATCATAATTTTTTGTTGTATGTTTTTATGTATTTTGAATATAGTG TTGATCATGTAGCAATTTTTACTATTGCAGTGGATTGTTATTTTGTTTTTTTGAAAATTAATAAGAAAACATTGTAACAT TTTCCTTGGTTGAAGGGGTAAAATTTGAGGAAACTAATTTTTGGGGAATGCATTTGATAGTGTTATTTTATAGATGGGAA TGGTGGTGGGTTTGGGGTTCTAAGGCTTGATCATTTTGTTTTAGCATTGCTTACTTTTTTTTTCACTGGCTCAATACATA TGGGTTAAGTGGATGCTTCCGTCAATGCTTATATAAATGATGAGGGAGTTTTTAGTTCTTGGCAACTTGTATAGTTGTTC GGGTTCGGGAACTCCTACATTTCTAATTCCCTACAAGATCATTGAATGTGTGGATTAATTAATTAGATGATGCTTAAGAC CTCTCAATTCAAGAAACATTGCTTCTATTTGCGTGGTTGGAAACATTGTGTAGTAGTTTTAGCATTGCTTACTTTTTTTC TCTGGCTCAATACATATGGGTTAAGTGGATGCTTCCGTCAATGCTTACATAAATGATGAGGGAGTTTTTAGTTCTTGGCA ACTTGTATAGTTGTTCGGGTTCGGGAACTCCTACACCGATTCCATGTTAATAACATATGTTTTTTTTCTAGGACTTGCCA ATTTGATTACTATGTATTTTCCGTTATTTTTTACTATGTATTTAATTTATTTTTCTTGAATTGGGTTCTGGAACTCCTGC ATTTCTAATTCCCACCAAGATCATTGAATGTGTAGATTAAGTAATTAGATTATGCTTGAGACCTCTCAATTCAAGAAACA TTGCTTCTATTTGCGGGGTTGGAAACATTGTGTAGTAGTTTTAGCATTGCTTACTTTTTTTCTCTGGCTCAATACATATG GGTTAAGTGGATGCTTCCGTTAATGCTTATATAAATGATGAGGGAGTTTTTAGTTCTTGGCAACTTGATAGTTGTTCGGG TTCGGGAACTCCTACATTTCTAATTCCCTACAAGATCATTGAATGTGTAGATTAAGTAATTAGATGATGCTTAAGACCTC TCAATTCGAGAAACATTGCTTCTATTTGCGTGGTTGGAAACATTGTGTAGTAGTTTTAGCATTGCTTACTTTTTTTCTCT GGCTCATTACATATGGGTTAAGTGGATGCTTCCGTCAATGCTTATATAAATGATGAGGGAGTTTTTAGTTCTTGGCAACT TGTATAGTTGTTCGGGTTCGGGAACTCCTACACCGATTCCATGTTAATAACATAAGTTTTTTTTTCTAGGACTTGCCAAT TTGACCACGGCGATTTGAGTTTTTTTACTATGTATTCATTGCTTCTATTTGCGTGGTTGGAAACATTGGGTAGTAGTTTT AGCATTGCTTACTTTTTTTCTCTGGCTCATTACATATGGGTTAAGTGGATGCTTCCGTCAATGCTTATATAAATGATGAG GGAGTTTTTAGTTCTTGGCAACTTGTATAGTTGTTCGGGTTCGGGAACTCCTACACCGATTCCATGTTAATAACATGTTT TTTTTCTAGGACTTGCCAATTTGACCACGGCGATTTGAGTTTTTTTACTATGTATTCATTGCTTCTATTTGCGTGGTTGG AAACATTGTGTAGTAGTTTTAGCATTGCTTACTTTTTTTCTTTGGCTCATTACATATGGGTTAAGTGGATGCTTCCGTCA ATGCTTATATAAATGATGAGGGAGTTTTTAGTTCTTGGCAACTTGTATAGTTGTTCGGGTTCGGGAACTCCTACACCGAT TCCATGTTAATAACATATGTTTTTTTTCTAGGACTTGCCAATTTGATTACTATGTATTTTCCGTTATTTTTTACTATGTA TTTAATTTATTTTTCTTGAATTGGGTTCTGGAACTCCTGCATTTCTAATTCCCACCAAGATCATTGAATGTGTAGATTAA GTAATTAGATTATGCTTGAGACCTCTCAATTCAAGAAACATTGCTTCTATTTGCGGGGTTGGAAACATTGTGTAGTAGTT TTAGCATTGCTTACTTTTTTTCTCTGGCTCAATACATATGGGTTAAGTGGATGCTTCCGTTAATGCTTATATAAATGATG AGGGAGTTTTTAGTTCTTGGCAACTTGATAGTTGTTCGGGTTCGGGAACTCCTACATTTCTAATTCCCTACAAGATCATT GAATGTGTAGATTAAGTAATTAGATGATGCTTAAGACCTCTCAATTCGAGAAACATTGCTTCTATTTGCGTGGTTGGAAA CATTGTGTAGTAGTTTTAGCATTGCTTACTTTTTTTCTCTGGCTCATTACATATGGGTTAAGTGGATGCTTCCGTCAATG CTTATATAAATGATGAGGGAATTTTTAGTTCTTGGCAACTTGAATAGTTGTTCGGGTTCGGGAACTCCTACACCGATTCC ATGTTAATAACATAAGTTTTTTTTCTAGGACTTGCCAATTTGACCACGGCGATTTGAGTTTTTTTACTATGTATTTTTCC GTTATTTTTAATTTAGTGCGGTTGATTATTTGTCAATATTTAGTACTGCAATTGATTGAAGTTTTGTGTAAGAAGCAGAA GAAGCATGGCCACTGATTTTTAAAAAATAAAAAGAAAAAGAAACGGTATTATTTTAACTTTTTCCTTGCCTTTGTTTTAA AATATTACTTTTTCCCTGGCTAAAGTTGTTAAGATCAGGGGAAACAGATTTTTGGGAGTGAATATTGTAGTGTGATGTTT TTCACCGAGTGGGAATGGTGGTGGGTTTTTAGCCATGAGCATTTTGTTTTAGCATTACTTATTTATCTCCCTGGCTCAAT CCATATGGGTTAAGTGGATGCCCTGTCAATGCTAATAAATACTCCCTCCGGTCCTATTTATAAGCATGAAAGAGAAGAAA AAATTTGGTCCTTTTTATAAGAACCAAATGAATGTTTGAGCTATATTAATTAATTTTTTCCAATGATGCCCTTATTAATT CTAACTTGTAAAATGTGTGTCATTAATTATTCTCTCTCTTTCCCCCTTTCCAACACTAATAACAAAGGGTAATTTTGGAA GTTTATTTTGATTTAAGACAAATTTAATGCATTTTATCTAGTTTAACTACATTTCTTAAACTATGTGAATTTTTTTTTTG TTGCTTATAAATAGGACCGGAGGGAGTACAAAGATGATTAGGGAGCTTGTTAGTCCTTGATAACTTGTATTGTTCTTGGG GTTCGGGAACTCCTACATCGATATCACGGTTTTTTTGATGTAATTATGTTAATGCATGATGTGTTTTTTTAATGTATTAC TAATTGCCAATTTGACCATGATGATTTGGAGCTTTTTTATAATTTATTTGTGTTATATTTAATTTAGAATGGTTGGTTAG GGGATGTATCGCATGAGAAATAAGATGTGATTTACTTTTGAAATAACATCACATATTTGTCGATGTCTCCAGGTTAATTG TTAATTGTAAGGTCAGCGCTCAGCCTGCCAGATCTAAGGATGCTTACTTGGTATGGGAAGAGCTTGAAGAATGTAATATA GTAAGCTATACATACAAACATGACTCCATACCCAAATCTTAGAATTCTTTTTATAGATTTCTTATTGTTTCTTCAACAAT TGAAGATAAACAGGTTTGTAGCAATGTTATTCTTCATATATTTTGTAATGACTCCATTTTAACAAGAACAAATTGGGTGT TGTAGATTATTTTATTTGAAAATTGAAATGAATCGAAATTTGTGGATATAGTAATTTGGAATACAAAGTTCTCTAGCATC CATCTTAACCTGGGATGCTGCTATCAAAGTCTACCTATTATCTCAAGAGGAACTAATGTCAAATCAAGCGTCTGCTTCTA TTAACTGAAATCAATGTCAGGTAAAAGGCTGTTTCATTTAATGAAAAGGTCACTTAATCTAATGAAGTAGAAAGCAGCTA GTTCTGATTTCTGAATGCAAGCATCCACCAGATTAACTAGAGAATGACATTGTATATTAACATCTACTAATTCTAAGGAT GCTTGCATCATCATTTTGGGGTTGTATGTGAATGATTATCAGTAAAGCATGTAAAGATTTCACGACGACTGTCATGACGG ACAAAACCCCATATCACTGATGATTATATCTTTTGATTGAATAATCAATGTTGTCTCCATGATCAGAACAAATTTACGGA AGAGTTGGGCCTCCATGTTCCTTTCTTGGCACAGAGCAACCCTTCTTGGTTTTTGGTTATTTCCCAGTGTAGAGATTTCA ACAAATTCTCCACTTCTTCAACGACACTAGATTCATCACGGACAATCAAATTACCTCCTGGCCTTGTTATTCTATCTACC TCTGCTAATACAGGAACAAGCTTGCACCTGACAAAACGAAACAAGAGAACCAGATTAATATCCTGCAATTTCTCCAGTCA AGGTGAAAAAAAGATGAACTTCAATTAATCAATACCTGTTCTTTAGATTTGAGAAAAGATGATCAGCATGCAGTAGATCA TAAGTTCTTGGATAGGTGCTGAAGGATTCACACCAATCATGGTATATTCCAATTAGACCACGTTCAAAGATGATAGGAAG TGTGTCTGGTGCATCCATGTTCACCACATTGAATACCCAAACAGGAAGATCCTTTAGAGCTGCTCCAAATCTGCACACAC ATGGCACCACTTTTAAAACTACCCCTACCCAATCAATTAC
CDS sequence (LotjaGi4g1v0122900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAATCGGAGCCGGCGGTTTGACTCAAAAGATCGCCCCCTTCAACCTCATCGCCGCCCACAATAACCGCAAGCGCCC ACCATCATCCTTTCTCCCCCAACCGTATCGCATGGCCGACGGCGCAGGCTCCGCTAATATACCCGCGCCACACCCGATCC AACCCAAACCGGAGAAGAAGGAGATTCCTCCGCCGCCGGAGAAGCCAGAGGCTGGTGATTGTTGCGGCAGCGGATGCGTC CGGTGCGTCTGGGATATCTACTACGACGACCTTGAAGAATACAATAAGCTATACAAACAGGATAATCCCAGCACCAAACC CTAG
Protein sequence (LotjaGi4g1v0122900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRIGAGGLTQKIAPFNLIAAHNNRKRPPSSFLPQPYRMADGAGSANIPAPHPIQPKPEKKEIPPPPEKPEAGDCCGSGCV RCVWDIYYDDLEEYNKLYKQDNPSTKP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 20 | 77 | 58 | - | – | |
| PANTHER | 22 | 105 | 84 | 3.7E-25 | ||
| Pfam | 61 | 99 | 39 | 1.0E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0122900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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