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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0144700 |
| Transcript ID | LotjaGi4g1v0144700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chalcone reductase; TAIR: AT1G59960.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|P26690|6DCS_SOYBN NAD(P)H-dependent 6'-deoxychalcone synthase; TrEMBL-Plants: tr|I3T585|I3T585_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0144700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:23188612..23188878) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCGGTGATTGGCATGGGCTCAGCCCCTGACTTCACCTGTAAGAAAGACACAAGAGACGCCATCATAGAAGCCATCAA GCAGGGCTACAGACACTTCGACACGGCCGCCGCATATGGCTCAGAGCAGGCTCTTGGAGAAGCTTTGAAGGAAGCACTTG ACCTTGGTCTTGTCAAGAGAGAAGATCTCTTCGTCACTTCCAAGCTTTGGGTCACTGAAAACCATCCTCATCTTGTTCTT TCTGCTTTGCGCAAATCACTCAAGTAA
CDS sequence (LotjaGi4g1v0144700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGGTGATTGGCATGGGCTCAGCCCCTGACTTCACCTGTAAGAAAGACACAAGAGACGCCATCATAGAAGCCATCAA GCAGGGCTACAGACACTTCGACACGGCCGCCGCATATGGCTCAGAGCAGGCTCTTGGAGAAGCTTTGAAGGAAGCACTTG ACCTTGGTCTTGTCAAGAGAGAAGATCTCTTCGTCACTTCCAAGCTTTGGGTCACTGAAAACCATCCTCATCTTGTTCTT TCTGCTTTGCGCAAATCACTCAAGTAA
Protein sequence (LotjaGi4g1v0144700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPVIGMGSAPDFTCKKDTRDAIIEAIKQGYRHFDTAAAYGSEQALGEALKEALDLGLVKREDLFVTSKLWVTENHPHLVL SALRKSLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 88 | 88 | 5.0E-47 | – | |
| PANTHER | 1 | 88 | 88 | 5.0E-47 | ||
| SUPERFAMILY | 1 | 88 | 88 | 3.67E-24 | ||
| Gene3D | 1 | 88 | 88 | 1.3E-35 | ||
| Pfam | 10 | 77 | 68 | 2.5E-10 | ||
| ProSitePatterns | 29 | 46 | 18 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi4g1v0144700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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