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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0155500 |
| Transcript ID | LotjaGi4g1v0155500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trichome birefringence; TAIR: AT1G60790.1 trichome birefringence-like protein (DUF828); Swiss-Prot: sp|Q8VYR3|TBL2_ARATH Protein trichome birefringence-like 2; TrEMBL-Plants: tr|A0A0L9TNB5|A0A0L9TNB5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0155500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:26986373..26994308) extracted from Lotus japonicus Gifu genome v1.2.
TTATAAGGAGACATTTATTGTATTAGAGGTTAATTTTGGCAACATATATGCATGGATATGGTTAATTTTTTAATTGACAC CGTAATACAAGAGTGTTCCACCGTAACAAGGTGCAGCGGTTTGTTTCTTTTGGTCACTTCTTCTCTACTTTCCTCACCAT CACCATGTGCCATCTCTGAACTTTGAAGGTCATTTTTCTTTGTTTGTTTCACTTTCTTCAAGGACCCGAAGAAAAAGAGA GAAGCATGCAATGCAAGTTTTTGGCTATGGAGTACTTGAAGAAACTCACATTCTCTGACCCTTTTTTGTCACACAGAAGA AAAGTGTTTTCTGGGTTTGGTTTGAGTTTGGGTATTGGAGCTTCTCTGCTTCTGTGCTCTCTGTTCTTTTTCATTAATCC CTTCTGGGTCCCCAAAGTTCAAGTGTTTCTGCCAGAATTTAACACTACTAGTGAAGATTCTTTGTTTGCTTCACCCCCCT CTTCATTCAACACTAGCCAGTTTAATTATTCCTCTGAAAACAACACTTCTGTTACTTCATTTTCCCAACATTATGAGGGC ACTGTAGAAAATGTTGTTGAGGGTAGAACTGGTCAAGTGAATGTGTCAGGTATTAGATTGGGACCAGATGTTGACATGAA TAATGTTAGTTTTGGTCTTAAAGTGGGGGGAAATGTGGGCAATGCTTCATGCAATGGTGTAGAGGGAAGGAAAGAGGGGA GTTTGGTTGGGGAAAAGAATGTAACTGTTATTGATAATGGTTCCCAAGTAGTGGAGAAAATGAAAGTTAGTTTTTATGAG GAGTGTGATATCTTTGATGGGAAGTGGGTGAGGCATGATTCAAAGCCATACTATCGTTTAGGGTCTTGTCCCTTCATCGA TAGGGACTTTGATTGTCACCGGAATGGGAGGCCTGATCTAGATTATGTGAAATGGAAGTGGCAGCCAAATCAGTGTGACA TTCCAAGGTATGTTTATTGACTTATTGGTTACCCTTTTTCACATGCAAATGTAGTGAGGTGTTGTTCTTCATCTAGAATG GGAAAATAGTTAGTACATGAAGTATGAGAGTGGGGAATAAGAATGATTCAATGTTGATTGTAACAATTAAATGAAAAGAA TGAAAGTTTTCTTGCATGTGTTAAATAACATGTTTGGATCAGATTCTCTGTCCTCATAATCAATTCTGGGCTTCTGAAAC ACAGAAATGCTCATTTAGAAACTCGTTTGAAAATGAAGTCAAAATCATGGTGTTCAGAAGCAAAAGCTAAAGGTAAGGGA AGTTGCTTCTGTCAACCATAATTTTGGCTTCACCATGGTTTTCGAACGAGATTCTGAACATGCATGCAGCATCTTCCCAA ATTTATTTTGTGTTGTCTTTAGAATGAATTGTAGGTAGATTTTCTAACATGCAGTAAGTGTTTTTGGATCCACTGGTTTG CATCTTTACCTGTATGTATTGGCAGTATTGCAATACTTGAAGAAATATCACAATCCAAAATGTTTGCATTGGTCTCATAA GTGTAGTGTTTATGATTCAGTTTTGGCATGAGGACACTTCAATTCTAAGAAAACCAGTGGCGTTTAATTTCAGCTTTGAA ATTTACAATTTCTGTTCTTGTATTTGATCAATTATTGATGTAACTTCTCCTCTCAGTTTGAATGCAACTGATTTTCTGGA GCGGTTGCGCGGCCAGAGGCTGGTTTTTGTGGGGGATTCATTGAACAGGAACATGTGGGAGTCTCTGGTCTGTACCCTCC GTCACAGTATCAGGAAGAAAAAGAAACATGTTTATGAAATTTCAGGAAGAACCGAATTTAAGAAGAAAGGTGTCTATTCT TTTAGATTTGAGGCAAGTTTCCTGTAAATCTATTGTACTTTGTCTGGTGTGAATCTTGTAATGGTATCTTATTAGAACTT ATTTCCTGTAATTTTAGGATTATAATTGTTCGGTGGATTTTGTTGCGTCACCGTTCATTGTTCGAGAGTCCACTTTCAAA GGAAAAAATGGGTCATTTGAGACATTAAGATTGGATTTGATGGACCTCTCAATTACCAAGTATCAGGATGCTAATATCAT AGTCTTCAATACAGGCCATTGGTGGACTCATGAGAAAACATCAAAAGGGTGAGTTTAGATTCATTCAAAATATTTGTCTC TATTGTCTTCTTCTTTCCCATATTTATATTCTGCCATATCTTGATTTCTGCTTGTGCTTCACATAGTAAGACATGAGATT AAGATTTCTGATTTTGCTGTCATCTTGTACTGTTGCAGAGAAGATTATTATCAAGAGGGAAACCATGTATACCCTAGACT CAAGGTTTTGGATGCATATACAAGGGCTTTGACCACTTGGGCTAAATGGGTTGACCAGAACATTGATGCCAATCAAACTC AGGTTTTCTTCAGAGGATATTCAGTTACACATTTCTGGTATTAATCTCTTTTACATAGCTTCTTCCATAATTTAATTGCT TCCGCACTTATATCTTTTCCTCGCTTGTACTGTAAAATTAGTTAAAGTATCTATCTTACTGGAAGTTTATGTGTTAATTA AATCTAGACATGCGAATTCGCCAAGGTCCTTTATCATCTAATATTGACTATTGCTTGTTTACTTGTACTTCTACTATTGG GAAGTCACCACATAGACTAGAAATATGACCGAGATAGCCCATATATATGGGAAGACAATTGTCATCTCTAAGCTAGCTAG CTTTTGGGTAGAGTTAGACCTCCCAAATTCTAATATCTACAAATATATTAGGCTTAAATGCATTTTTGATCCCTGATGTA TTGTCATTGTGCGATTTGGGTCCCTTATGTTCAAAACGAGCGAATTTAATCCCTCATCTTCCAATTTGTGAAAATTGGGC CCCTACGTTAAGTTACCTTCCAAAATTAAACGGAAGTTGTTGATGTGGCCTCTTTAACTGACGTGGCCCTGACGTTGCAC GCCACTAGGATGACATGTCACATAATTTTCTTTTCCCTTAAAAATATTTCTATTTTCTTTTAATTTATTATTTTTTTTTA ACTTTTTATCTTCTTCAACCCTTTACACAGCACCACCTCGCCTCCCTTCTTCTTCTTCCCTCTTCATCCAATACCATGAA TTTGAAATCAAATCTTACACAGTAAATTAAAGCCCACATATATTGAATCAAACCCAAATTATCTAGAAAACGGGATGAAT CAACCATTTTCTCCCTGCTTCAAAGTAAAACAACCCATAAAGGGTTTCAAATTAACATCAATTCCAGAAACAAACAAAAA TTGAATCTTCAAGTTATTTTCTTTAACAGATCAACAACTTCATCAAGAACAAGTGAACAACATCAATAAAAATCTCTGCA GGGAACCCAGAAAGAGGGGAAAAGGTAAAATTCCAGAAACATAGAAATTCCTTGCAGACATAGCCGGAAACTCTCCCTGA ACCTTGTCGTCGTCCTCTGTTGCCCAGCCCCTGAGCTCCACCGCGGTCACAATCACTACAAACGCTGCAACAATCGTCGT CCTCCCCGATCTCCCCATCGAAGGTCTATGTCAAGTCTGACTGTTGTGAAGCTTCCTTCGTTGATGCCGCTGCGCCAGGG AAACCGCCGCTCCATCTCCACTGCGCCGCCGCTCCTTGCCGCCTCAATCGCTGTCGCGGAAACCGCCGCGAGCACCAGGA GGAGCCGCCTTGCCAATCCTCTTCGTCATCATCTCCAATCTTCCCTTCCCTTCCATGATATTCGGTTCTCTCTCTCTTGA GTTCTATTTTTCTTTTCCTCATCAGAAATAGTTAATGTGGATTTTGTGGATGTGGGTTTTGTTATGGAGAGGAGCAGGTT CAGATATGAGGGAGAAGAAGACAGTGGGTTGACAAGAAAGTGGTGGTGGTTTGGCGTTGACTGTGTATGGTAGAGCTTGG TGGTTGTGGCTATGGCTATGGTGAAGGGATGCAGAATGCAGAACGTTGGGGAAGAAGTTTTTTTTTTTTTAAACCAAGGA AGAAGATGAATTGATTTGGACTTTTTTTAAGTTATATTTTGTTCTATTCTGATTTTAATTTGGTTTTTTAATTAAGTTGT TTTATTTGTTTTCATTTTTATTTACTAATGTGTTATTTTTTTTTTTGAAAGAATTTACTGATGTGTTATTAAAGTGGTGT AATTAGCAAAGATAGGTTAAGATGGTGTAAATAGTAATGAGTCAGCAATTTCCGTTTAATTTTGGATGTCAACTTGACGG AGGGGCCCAATTTTCACAAAATGGAAGATGAGGGATTAAAATCGCTCGTTTAGAACATAAGGGACCCAAATCGCACAATG ACAATACATCAGGGATCAAAACTGCAATTAAGCCAATATATTATGTAACAAGGACATGGAATAGGTCACTGTTGGAAAAT GGAGATTATGGAGACATTTGGTAAGTGGTAGTATACCCTTTGCAAGTTTACAGAAGATCTGTATGATCTGGCTATAAAGA GAAAGTTATTGGTAGTTGAAAATAAATTAATTCAATACTAGATTTTTATCATGATCATCTCAAGATACTTTTTTTTTTCC TCCTTTATCAAAATCCGTAGCTACTTTATTTTTATTATTGCTGATGTTTTATTACTTCAGCAATTTCCCCCTCATCCCCA GTCCCACCTCTATCTATAGGCTAGAGAAACCATGTTGTGTAGTTGATCATGTCTTAGAATCTGGATCAATATCCTCTCAT GTGACATGAGAATTTCACATAATATTGTCATGTTCAAATTCCGTGTCTATCTCTCTCTTCGTTTCATATGTATTAAATAG ATCTTTCTAGTTATTTATGGAGAAAAATAGACACAATGTTTCACTCATGAGATGATCCTAATCCCAATGCCGCAACACGA TGAGGACCTGCCTTCAGGATTGATATTGTAGTGGGTTTCTACTGCAAATTCTCGAATACAATTGGCTCTCGATTTTCTTT TTACCACATTTTGTTACCATTTAAACCAACCATTAAAGCATTTGAATTAACCAATTGGAATGAAATTAACCTTTAATAAT TTGACTAATTCACCACCTTAATTGGTTAATGTAAACCCTTCTCCTTCCGAAACTTGTCCAAGGCGGTGACTTCATATGTA CATTTTAGCACTTATAGTGATTCATATCCGTCTGGTTTTCCTTGATGAATCTAATACTTTGCAGGGGTGGGCAATGGAAT TCTGGAGGACAGTGCCATAAAGAAACTGAGCCAATATTTAACAAAACTTACTTACAAAAGTACCCTTCGAAAATGCGGGC TCTAGAGAATGTCATAAAAAACATGAAAACCTCAGTGATATATCTGAACATAAGTAGACTTACAGATTTCAGAAAAGACG CACATCCTTCGGTATACAGAAAGGAGTACAAGATCTCAATGGAGCAGAACACTACTGCACCATTTGAGGATTGCAGCCAT TGGTGCTTGCCTGGTGTACCGGATACTTGGAATCAACTGCTATATGTTTCTCTCTTAAAAAGAGGGAAGGGAACATGGAA AAGCTGAGCAAGATTCCTCATTCCACAACCAATTTCTAGTTTTTTATGCTTATTTAGAGTCTGTTTGGATGCGGGACAAA AAGCACTTATTGGAGCTTATGCTTTTTTCTAGTGATAACCTCTAATAAGTTCTATTTAGTCGGGATTCAATCTGGATCAT AGTTTTACAATATGTATATTCTGTGTTCCCCTTTGGAATATCCATCATAAAGGGTAACTTAAGATATTGTTTGATTAGAA TGTCAAAATATTTAGGGAAGGGAATAGGTTAGTGGGTTGGTTTTTGCCAATTCTCCTCAATGACCCACGGATTGTAATAT ATATATATGCAGGTTTGGTGTGAGAGATGATCTTGTTGTAGTTGCTTACGGTGTTTTGTTTGTAATAGGGGGTACAGTCC CTCCATTTTATCAAGAGAAAGAGAAAATGACAAGATTGTATAGAGGTTCCTATATTCATCATCTTGCATGGTACAAAGAT TTGATTTGAATCTATCTGATAGACTGATTCATACATCAGTTACTGAAAATGAATTAACATACTTGTTATAATGCTTGTGA CTTGGGAAATTATGACAGAATAGAAATTCTTTTTATAACAAAAGGCTCTCTGATTGGCTAAATGGTAAGTTCTCTTCCAG GTTCCAAAATCCCATCTCAGCTACTGTGATATCAATATCATTCTGAACAAGCCACACCATTAAGGTGTTTTTAACTGGGC CATCTTAAATAAACTCTGCTAAACCTGAATTATAAGATTATATCACAGTCTATCATTTAGATTTATTTATTGGAGACCAC CTATATATGAATTACCCGGAGGTGTCCAATCCTGTAAATTTCACGTGATGTCTAACCATGGGCGTCGCGAGTATGTGTTA TTGTGTTAAGGTCTCACATTGACTAGATATATGGCTAAGTAAGCCCGTCTACCAGTTGAGCAATTATCATCTCTAAGCTA GCTTTTGAGGTAGAGTTATATCCATTCCAAATTCTTATAAACTCATAATAGGATTAACGCCTAAACCATTGAGGGAGTTG AAAGAGTTGAATAGACATCTGCTACTACCATCACCACCAGCACCCTCCACTATCTCCTTACCAGAACCTCCAACTTGATC GACATCAACATGATTGTTATCACCTTGACTATATATGGTGATATGTTCCCCATTGAACTCAAGTTTTATTGGTTAACTTA AACGTTGAAACATTACAGTTCAAGACTTCAAGGCTAATAAACACTGTCTATTTTAAAATGGCAATACTTATGACTTCCTC TTAACTTTAGTATACAAAAATTTCATTTTTGTTAACGTTTTTCTATATGGGGAGAGGACAAACTAGTTTTGTATTTAGTT TCTTGAACTACTTCCAATGTCAGTAAAATCAGAGACTCAGGTGAAAAGGAAGCATGGTAGTTATTGACTTTTAACTACCT TTCAAATTAAGAGGATCAACTTCTACAAAACACAATCCTACACTTGAAGGAACAAAAACATCACTCAAATACTATTATTG CATATAAGGCCACAAGACAACAACCATACACACATGAGAAAAGGAAAACAGACACAGAAAAAGAAGAGACAAGGTGATCA TAATTACCTACCTACTCATCTGCAGAAACTGAAGAGCAAACTGGAGTCTAGTCAGCTGCAAATTGGGTGATATGAATGAA CACCACCTCAAAGGAAGAAGAACATTTTTGTTTATTACATTCTACTTGAAGAAGAACTACAAAAGAGTCATTCATACATA GCCATAAGAACCCCTAATGGGGTCCATTGCCTTTCTGTGACTTGCCGGTTCGCCAGGCTGTAGCCAAAGCTTCTCTCTCA ACTTCTTCTACTCATAAAGACTCCTTCTCGGTATGCCCGGTGATTACTAACTCGGGTTTCAAATTGCGATCCACAACTGC AAGTGCGACCGCAACATAACGAGTTTTGAAGACTAGAGAAGCCAATGGCTAAGCCTAAACAAACTGTAGGATGCAGAGGA GTGTGTGTGAGGGGTGAAAGACCCTGACCCGCTCACACATTCCTCTCCATGCTTCTTCAAGAGCCATGGATGGATTTTTG CCAACAAAATCTCATGTCTAACAGATTCACCTTGGATAGACTTGTCCGTTCGGTTTTCCCCCAAATGGCTCTCTGGGAAG CTAGTGGAGAAGTTAGTTTCTGATCATTGCTTTAAATAGTTGATGATTGAGAACTCAGAAATGGCATCACCTATTCATTA TTCAAATGCATTCTTTTGCTATCATAGGATGCAATTCTAGAAAGTAATGAGAGATAACATACAGAACAGTGTCCATTGAA ATAAACAAACAAATAAAGGATTAGTTAGTTTATATGACAATATTAACCTTAACCTAATTACCTACCTAATTCCCCCATTT ACTATTTTTCACTCTG
CDS sequence (LotjaGi4g1v0155500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCTAATACTTTGCAGGGGTGGGCAATGGAATTCTGGAGGACAGTGCCATAAAGAAACTGAGCCAATATTTAACAA AACTTACTTACAAAAGTACCCTTCGAAAATGCGGGCTCTAGAGAATGTCATAAAAAACATGAAAACCTCAGTGATATATC TGAACATAAGTAGACTTACAGATTTCAGAAAAGACGCACATCCTTCGGTATACAGAAAGGAGTACAAGATCTCAATGGAG CAGAACACTACTGCACCATTTGAGGATTGCAGCCATTGGTGCTTGCCTGGTGTACCGGATACTTGGAATCAACTGCTATA TGTTTCTCTCTTAAAAAGAGGGAAGGGAACATGGAAAAGCTGA
Protein sequence (LotjaGi4g1v0155500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNLILCRGGQWNSGGQCHKETEPIFNKTYLQKYPSKMRALENVIKNMKTSVIYLNISRLTDFRKDAHPSVYRKEYKISME QNTTAPFEDCSHWCLPGVPDTWNQLLYVSLLKRGKGTWKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 7 | 107 | 101 | 1.0E-32 | ||
| PANTHER | 8 | 115 | 108 | 9.0E-65 | – | |
| PANTHER | 8 | 115 | 108 | 9.0E-65 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0155500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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