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LotjaGi4g1v0167300.2

Overview

Field Value
Gene ID LotjaGi4g1v0167300
Transcript ID LotjaGi4g1v0167300.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Pantothenate kinase; TAIR: AT4G32180.1 pantothenate kinase 2; Swiss-Prot: sp|Q0J035|PANK2_ORYSJ Pantothenate kinase 2; TrEMBL-Plants: tr|I1KXE5|I1KXE5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0167300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:31869321..31876426) extracted from Lotus japonicus Gifu genome v1.2.

AAATTTTCCCAACTTTGGTCAATTATGGAGAATAGTTCTGCTTCACATTAGTTGCCTCCTGCCTAAAATAATGTTGTCTA CCTGTTGACAGGATCTCTTGCCAAGTTAGTATACTTCACGAAAGATGGTGATCATTTTGTTGATGGTGAGGAGGGGATCT CGCCTAGAAAGGCGTTGGAGACATCCAATGGCAGTAGGAACCATCCTGTTCTTAATGGGAGGCTCAATTTTAAGAAGTTT GAAACAAGCAAGATAAATGATTGTTTAGATTTTATCAAGACCATGAAACTTCATCTTGGAGGTGTGGCTGAATTTTGTAT CTTCATTATTCCAATTCTTTATATTTGATAATATTTGTCTTGGTAAAACCAAAATTTCTAAGCCTCTGATCATGTTCATG GTTAACAATTTTTTGTTCTTTCAAAAACTTGATCAACTGGCATGGTGAACTGAGCTTAAATACTGATTTCTCCTTTAACA CTGTTGTATTGATCTCATATTCGTTTAGTTTCTCAAACTGGTCGGATAGAATATCTCTTCCTCTTTTTACTAAATTGTTT TCTTCCTTCCTTACTTTTAAATTTTTTTTTACAGTCTATATGTATTATTTGTCATAGAAGTCTCAAGTGTCTGTCAGCAT GACATAGTTATAATGAAACTCAAGCTCGAAACAGCTAGCTTTGACCTTCAAAATTAAGCTTGATTGAAGTTTGCTAATTA GGTGGTGAATATGCTTCAATTACTTGTAATAAATAGGCTATAAGTTTGCTAATTAAGTTTACTATTTATGGAAGCATGAA CTGTATCAGTTGTAAGATAATTTATTTCTTACACTTACAATCTACCAAATTCTAGTACTAACAGAATCAAACCTCACCTA ACCAATTGCTTAGGCACATTTGACTTGTGTTTAAATTAGGCAATTAGCTATATTGAATAGATTACAACTTACAATAAACC TTATTAGAATTTGGGGGCCTAACTCAACCCAATAGATAGCTCAAGAGTTGAGGGTTTCTCTACCATTTATAAACGCCAAT GTGGGACTTCTAACACCCCCTCACGCCCAGGGCTAGACATCTCGAGCGTGGAATGAGCATCAACGAGTGGCCCAAATATG GGAGGTCTCGACAACAAATGGATCTAGGATAGACTCTGATACCATATTAGAATTTGGGAGGCCTAACTCAACCCAAAAGC TAGCTCAAGAGTTGAGGGTTGCTCTACCCTTTATAAACACTTGTTTGGCCATATCTCTAGCCAATGTGGGACTTCTGACA AACCTAATTATTCTTCTATTGATTCTATGACTAACAGAATCCAACCTAATTCATCACTTATGTGCATTTAACATGTGAAT AAGCTATTTTCTGCAACTTACAAATCAAGCTAGTTACCCACTAAGTACAGAGATAAATACAATCACTCTTACAGTACTAA ATAATTTGATGATGCTGAATTCATTTAACTTGCGGTCGTACATTTCATGATGCTGAATTCGTTTTTGAAGTCATTCTGAA ATTCTTATTTCTGCTTTGCTATTTCCTTTGAATTAATTGACTTGATGATGAATTTAGGCAGTCAGCAGCATGAAAATCCT GGAAGTCAACCAATAACTATTAAGGTAATCAAATTGTTGAAAATTACGATTATTATTCTGATGTTGATGATCATGATGCC TGTACAGCTATATTTTTCTAAATGTTTCTTTCGGACGTGTTTGTAATGCTGTAATATAGCTAAGCAACAGGAGTTAGTCT TATTAATACATAGAAAATGAGAAGGTGTTAAACGAATCCGTGGACTTAAATTAGACGTCAGGGAACATTATATGTGATAG GTTTCATAAATGCTAGGATCAATAGTTTCCCTTATTACTGTAATTACAAGATAATGTACAACATAAAATCACCCTGTAAT AATCCTATCTAATTATTTGGACACTCCACATCAAGTTGGATCATATGAAAAATATGTACCAAGCTTGTCACATATATAAT TGATTCAAGGACCTCGTAAAGATTTAGTAAAGATGTTCTTCAATTGATCATTTGAGTTGACGAAAGTAGTGGTGTAATCC CCCAGATACGATCTTTTCACAAACAAAATTACAACTTATCTCAATGTGATGGAAAAGATGTTGGTTTACATGTGTGACGC CATAGTGATCACTGCCAATGATTATGTTGTCAACATAAATACCCAAGTAAATGCGCCTTGTAGTTGAATGGCAATAGAAA ACTAAGTGGTTTGGATCACTACGTGTAATATTGTTGAACCACAGTAGTCAATCCACCAAACCATGTCATGGAGGTTTGCT TGAGATCATATAATGATTTGAGGAAACGGCACACTTGTTTGGATGACTCTGCCTGCAAAACAAACTTCTGAAATTGTTCT ATAACTTCACAGGACAATGTTGAGAATTATTACTGTTGTTATTGTTAATTTGCTCTGTATAATTATAGTCCCAAATTTAA TTTGGACAGATTTGTAAAGCTTCAATATATCTTTGATTTAGAAAACTTGCAACAGGGACTAGTCTATATTATGTAAATTC TGTACTTGAAAATTATTCAGAAATAATATTCAGTAAAATCAAATATAAAGTTGAACATGTCATTTTATGAAGAATTTATT CATGTTTGATTGTGCATATAGGTGTTTTGTGAAAAAATTATAGATTCACTCTGCTTCTCTTTTAAGCAATTTCTATTCCT TACCGTCTGTGTTATGGTCAACCTACATATACTTTAAGCTAAGTTTAAATAGAAAGAGTATTAATAGTTGAAGAAGGTAA ACACAAGCTTATTGAGATATTTAATATGAAAAAATTTCATGAAAAAAAGTACTATTTATTTAGTCTTAAGGCTGAGGCAA TTGAATGTATGTTATTTACTTAAGAATGAAAAACTATTGGTGAGAAGGCCACAGGTGGTGGTGCATACAAATTTGCAGAC CTCTTCAAGGAAAGATTGGGGATAGTTCTTGACAAGGAAGATGAAATGGATTGTCTTGTTGCAGGAGCGAATTTTCTTCT CGAGGTAGGATTCTATTAACACAAACTAGTAATGCTATTTTATTGTTATAAAGCAATTCTCTCATTTATAGATATCAAAT CAAATTTATTGTGATTCATATTCATTTTTCCTCCATGCATTTGATAAATAATCTCTTATGGGGAGATTGGCATATGCATA TATGAAAATTTGCTAGTGTATCATAATGCAGACTTCAAGATGTTGCAAGTTTAAGTCCTTATTTTTATTAGGAAGATGTT AGTTATGCACATTTTGGTTTAGTAAATGTTAACTTTTGTTCTTAAATTCCATTTTTTCAGGGAATAGTTGTTGGAAAGTA GTTCATGTTTGTTCATGATTTATTAATTTCAGATAATAAAATTAAAGTGGTCATATACACAATGTTTGAAATGAAGGCTC TCATGTAATCAGTCTAATGTCAATATTTGAGTCGGATTACTTAAATGATTTTCCGTTAAGCAGCTCTAAGATTCTCAGTC TATTGAAAGCATATATGTATTTTACAGTTCAATGACTTCCCCCGTTCATAGTTTTTCTTTTTCATCGACATAGAAATCTT TATCTTCAGTAAATATTTTATCAGGGGTTCACCAGAAGTTCTCATATTTATCTGGCTCTTCTTTAAATAGGTGGTTCACC GGGAAGCATTCACCTATATGGGTGATCAAAAGCAATTTGTGGAGATTGACCAAAATGATCTGTATCCCTATCTTCTTGTT AATATTGGCTCTGGTGTTGGCATGATCAAGGTAGTTATCATAGGTTATGTACTAGCTTTATTTGTCCAACTTCCAAATAT TTTAACTTTTTTAAGAACTGAAATTAATGGTTGAATAATTACATATAGGTGGAAGGAGATGGAAAGTTTGAGCGAGTTAG TGGAACAAGTATAGGTGGAGGCACTTTCTGGGGTTTAGGACGGCTTTTAACTCAGTGCAAGAGGTTATTTATATATTTAG TTTTGGGACATATTCATGATTGGTTGTATGTAGACTCATAAAATTATTACCCATAATGTACTTTCTGCTTCAGTTTTGAT GAGTTGCTGGAATTAAGTTATCGGGGAAACAACAGAGCGGTTGATATGCTTGTTGGAGATATTTATGGTGGAATGGACTA TGCAAAGGTAAGACTATTGGAAGTTTTTTTTTGTTGAAACCAGAACTTTATTAATTAAAGTCAAGAATTATATACACGAT CCAGCAAGAGCTAGAAAAACAACCAAACCGAAAAACCTACCACCAAACCAAAAAGAAAAAACCCCCCCACAGTAACTACC TAAGGAGAAGATAAGTTGGGAGGATTAACCTTAATCTGCTCTGCTAGTCTTAATCAGCAACTGTTCATGACCTTTATCTC AAGCTGAACCATCCCATATGTTTCCCAAAACTCCACATTGTACGAGCTCTAGTCATCACCCTAGACTCCCCCTCAATCGG ATCAACCCTCCACGCATAATCGTCCACATGGGTCTTTGGTTTATTTTTGCTTCCCTTAGGGAACCCCTCTCGTTGAGCCA CTTGACACCGTCTCATTAGTCCCCTTCTTTTTAGGCCTACCCCTCTCCGGTTTTACGGGTTGTGAAGGTGTCGTTTCCAC ATCTCTGTCATCCAAGACCACACCCTGTACCCTCCCAGGACTTGAGTCATCATGAGCAACAACTTCTACCTCCTCAACGT TAACCATCAGATCTGCACTTGCCCCCTGCTGTGAATCAGCCCCAATACCCGAAACCTGACCATTATCATTATGCTCAGAT GACATTTCGTTAAAGGATAAAACTTAGATCAAGTTCCTTAAATCCATTTCATCAAGTTTACCAATCATGTGATGACACAT GTGCAACTATTTCTAAAAATAAATGTCATTTATTAAGAATTTATCGTCAAAATTTGAAAAATTACACATAAACTTGATGG AATGGAGGTAAGGAACTTGACCTAAGTTTTATCCTTCATTAAAATGCCTAACCCATTGGTTGGGGTATACTTGCTGGAAA TTTTGTCTGTTGTCATGATATTCACCCCCTTCACTTATCCTCACTGTCATTGCCATGCTGTAAGATAACGGAGCTGTGCC CTTACCCTCCATTATACTGGGCAACTGTTTCGGTCCTTGCAAAACAAGAGAACCTTCCACTGCTGGTAACCCATACTGAT AGTTACCCTCAAGACTATTGAAAGTTGATGTCCTTTTTCCTGTTAAAAAGGTTAAGACAATCATCTCGTGTTACTATTCT TTGAAGAGGCCATCAATATTTTGAATAGCTAGGGAAAAATATTATCATGGATTCTTTACTGGAATATTTTCTTTGATGGA TAACAGATAGGTCTTTCATCAACGGCAATAGCCTCTAGTTTTGGAAAGGCCATTTCTGACAATAAGGAGCGTGAAGATTA CAAACCTGAAGACATGGCTCGATCTCTTCTAAGAATGATCTCAAATAATATCGGACAGGTCAGTTAGATGAATGCTACTG TGTGCTGCATGATACTATTATTCTATGCTGTATCATATGTAAAGATATAAATATGTATGATGTATATAGTGAAGTAATTT TTTTCGCATGACTATGATTCTGCAATTTGTTTTCACTTATTGTAATGGCCTTTAATTTGCTTTTCTATCTTAATAATAAT TGGGTTAGTGGAGCATGCCAAAAAAATCCTGTATTCTTTGTAATATCTTTTTTTTCAAAAGAAGAAAAAGATTAGTGCAG CATTCTACTGGCTAAATCAAGGGTAGAGCCCAAAGTGTCACTTTGCATGGTATGGATATGTTTGAAGGGAAAATTGGAAA TCTTTCTTTTTTTTTGTTTTTCTCTCATTTTTTTTGGGGGGGGGGGGGGGGGCAGGTTGTTTAGTTAGTAGAGAATAAAT GTTCATAATAAGCTTATTTAATATTTTATTTTTGATAAAAATAAGGTTATTTACTTTAAATTAGACTAAAACTGAAACAC AAATATCTTTCAGAGGCTGGGACTGTAATTTTTAAAATAAATCGAAAGGACAGTGTAATTGAAGCTTCTATAAGGCAAAA ATGAAATGTAATTTACTATAGAAAAATTGAAAAAATGTTATGTGAAACAAATTGTCATTTTATCTCAACTGTAAGTGCTT TATTGGCTGATATTGTTTCATGTTTGAATAGCATATTATACATTGATTCCAAGATATACCAACGGAGTTAAAGATGATTT TGGATATGGATACATAAGCATGTTAAATACTAGTATTCTTGTTATATTTGGGACTCTTATTGGGCTGGGATTTACCTATG TTAGTAGTATATATCAGTGTCAACTCTGTTATATAACACAATTTAGCAATTATTCCTCTTTTGAAGTTGATATCAGAGCA GTTTCTTCTATGCTGCCACTTCCAACTTCTGACACTTCTTTACCCTGATATCTGTATAATGCAAACTTTTAATACAACAG CAGACACAGATAAATACTCCTTCTACAATATGCTGTTCATGGTTGTAACGTTGATTTGATAGTGGATCTTAACCCATATG CATCTGTATGTGTGTTAGTTTTACCTTTGTTTCATGCAGTATTTATCCATGTTTAATGGTGAAAGGCATTGGGTTCTTAA CTTGTTTCCTCATCTTGTCTGGTTTTAGATCTCTTACTTAAATGCCGTTCGATTTGGGCTTAAGAGGATATTTTTCGGTG GATTTTTTATTCGGAGGCATCCTTTCACAATGGATACCCTCTCTGTTGCTGTTAATTTCTGGTAAGAGAAAGGGAAGTTC CACGCCCCACTTGCAATTTGATGCTTCATTATTCACATGAGGTTTCTATTTTTTTTTTTAACATATGTTAATTTTTATAG GTCTAAAGGTGAGGCACAAGCAATGTTCTTGCGGCATGAAGGGTTTCTTGGAGCTATGGGTGCCTTCATGAGATCTGACA AACATGGCCTCAAGGAATTATTGGTTAATCAAGTGGCGCAACAAACTCCCACCAAGTTTTCCTTTGCTGTTGATAAAATA CATGGTCCAGTAGATGGGGAATTAAATGGAGATGAAAGTATAGAGTGCAGTGTGTATGCAGCCTAG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0167300.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAACTTCATCTTGGAGGCAGTCAGCAGCATGAAAATCCTGGAAGTCAACCAATAACTATTAAGGCCACAGGTGGTGG TGCATACAAATTTGCAGACCTCTTCAAGGAAAGATTGGGGATAGTTCTTGACAAGGAAGATGAAATGGATTGTCTTGTTG CAGGAGCGAATTTTCTTCTCGAGGTGGTTCACCGGGAAGCATTCACCTATATGGGTGATCAAAAGCAATTTGTGGAGATT GACCAAAATGATCTGTATCCCTATCTTCTTGTTAATATTGGCTCTGGTGTTGGCATGATCAAGGTGGAAGGAGATGGAAA GTTTGAGCGAGTTAGTGGAACAAGTATAGGTGGAGGCACTTTCTGGGGTTTAGGACGGCTTTTAACTCAGTGCAAGAGTT TTGATGAGTTGCTGGAATTAAGTTATCGGGGAAACAACAGAGCGGTTGATATGCTTGTTGGAGATATTTATGGTGGAATG GACTATGCAAAGATAGGTCTTTCATCAACGGCAATAGCCTCTAGTTTTGGAAAGGCCATTTCTGACAATAAGGAGCGTGA AGATTACAAACCTGAAGACATGGCTCGATCTCTTCTAAGAATGATCTCAAATAATATCGGACAGATCTCTTACTTAAATG CCGTTCGATTTGGGCTTAAGAGGATATTTTTCGGTGGATTTTTTATTCGGAGGCATCCTTTCACAATGGATACCCTCTCT GTTGCTGTTAATTTCTGGTCTAAAGGTGAGGCACAAGCAATGTTCTTGCGGCATGAAGGGTTTCTTGGAGCTATGGGTGC CTTCATGAGATCTGACAAACATGGCCTCAAGGAATTATTGGTTAATCAAGTGGCGCAACAAACTCCCACCAAGTTTTCCT TTGCTGTTGATAAAATACATGGTCCAGTAGATGGGGAATTAAATGGAGATGAAAGTATAGAGTGCAGTGTGTATGCAGCC TAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0167300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKLHLGGSQQHENPGSQPITIKATGGGAYKFADLFKERLGIVLDKEDEMDCLVAGANFLLEVVHREAFTYMGDQKQFVEI DQNDLYPYLLVNIGSGVGMIKVEGDGKFERVSGTSIGGGTFWGLGRLLTQCKSFDELLELSYRGNNRAVDMLVGDIYGGM DYAKIGLSSTAIASSFGKAISDNKEREDYKPEDMARSLLRMISNNIGQISYLNAVRFGLKRIFFGGFFIRRHPFTMDTLS VAVNFWSKGEAQAMFLRHEGFLGAMGAFMRSDKHGLKELLVNQVAQQTPTKFSFAVDKIHGPVDGELNGDESIECSVYAA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12280:SF34
2 319 318 3.3E-174 –
PANTHER
PTHR12280
2 319 318 3.3E-174 –
Pfam
PF03630
13 269 257 1.9E-119
IPR004567
Gene3D
G3DSA:3.30.420.510
14 269 256 3.0E-115 –
TIGRFAM
TIGR00555
16 269 254 1.2E-104
IPR004567
SUPERFAMILY
SSF53067
38 269 232 1.41E-71
IPR043129
Gene3D
G3DSA:3.30.420.40
68 263 196 3.0E-115 –
Gene3D
G3DSA:1.10.8.780
148 192 45 3.0E-115 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004594
Molecular function Pantothenate kinase activity Catalysis of the reaction: ATP + pantothenate = ADP + D-4'-phosphopantothenate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0015937
Biological process Coenzyme A biosynthetic process The chemical reactions and pathways resulting in the formation of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0167300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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