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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0168500 |
| Transcript ID | LotjaGi4g1v0168500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MADS-box transcription factor; TAIR: AT1G69120.1 K-box region and MADS-box transcription factor family protein; Swiss-Prot: sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1; TrEMBL-Plants: tr|Q533S8|Q533S8_LOTJA MADS box protein AP1a; Found in the gene: LotjaGi4g1v0168500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:32370466..32380971) extracted from Lotus japonicus Gifu genome v1.2.
CAGACTACCACTGAGTGTGAGTGTGGTTCCTCTTCCTTCTCCATATACTTGTCCAGAAGAAGAAAGACCCATATATAAAT TAATATTATTATTATTCTCTTCTATCAGTCGGTTTGGCTTGGCTTGGCTATAATAGCAAGGTTTTTGAGCATATTACTGG GGTTTGTTCCCTTTTAATTACTTGATTGGGTTTTTCTTGGGCAAAAAAAGGGTAAGAGTAATTTGCTAGGTAAGAGAAGC TAGCTATCAAAGTGTAATATAAATTAAGAAAGGAAAAAAAGACAGTTATAACATCATCATCATCATGGGAAGGGGTAGAG TTCAGCTGAAGAGGATAGAGAACAAGATCAATCGGCAGGTAACTTTCTCCAAAAGGAGAGCTGGGCTTCTCAAGAAAGCT CATGAGATCTCTGTTCTCTGCGATGCTGAGGTCGCTTTGATTGTCTTCTCCCACAAAGGAAAGCTCTTTGAATATGCCAC CGATTCTTGGTAATATACATTTTTTTCATACTATATACTACACTCACACACTATATCATACTAAAATTATTAGATCTCTA TGTCTTAACCTTTCTATGTAAAAGTTTTACATTGTATCACATAAAATTCATAGATCTCTCTCTCACATGCAATATATTCA GTGTGCCTGAGGAAAGTGCAAGTGATCTATTTTTTTTTGGTACAACAAGTGATATCTATACACACATATTACTTGTTTAT TTTCTAGTTGACTTAGAAATTGTCGAGCTTCTTTGTTTTCTTTTTTTGTAAAATTTCTATACCTATTTTTTTTGCCGTCT TTGTACTTGAGAGAAGGGTTTGGTTTTGGTTTGAAAATACTCGTGAAACGAGAAAACACTTTCTTCTTCTTGCATATACC CTCTGAAATCACGGATTTTTAGTTTGATTGAAACGATTTTATCATGTATTATGATTGTGCATAAATATTATTGCTATCTG AATTCATTAAGATAATTATAGAAGATAAAAAGATAAACAACAGCAGTGAGTGTTGATACATATTTTTTTTTGTCTAAACA AGATAAACAATTTCTTTGTACATCACTAATCTTTTTGATACACAGATTCTACACTTAAGGGTTTAGAAAATTATACTTAC ACATTGATACTACGGGGAAAAATAGAACTTTTTTGTTTAATTTCTAAATAAAAATTGTTTATTGGCTTTTAATCCGTTGA TGGTGTTTAATATTCTGGAGACCGCGTCAGAAGGAGTGACAGTGTTTAGTTACATGTCAAGTTCATCTCGCTTTTGGTAT TTTGTACTTTCGATGATCATTTTCTTTCTTTCTTTCTTTTAACTAAATGAAGCTTTTATTTCTCTTTTGCTGTAACCTAG TTGATCAACACGTATTTTACAGAGATATTGTCGTGTTCATTTTGAAGCTCATTATGTCTTTTCAGAATGTTGTATGCTTT TCTGTTAAATCAGGACTAATTATTCTCGTCCAGTCTCTCAGCTGAGCCTGAGAGGGTTGCAGTTTCCGTGTCAATGAATT AAAGAAAATGAACTTCTAGTTTCTTACAATTTGATTGGATGCTTCATTAACTTTATACTGATTGATTGTTTGTAACCCAG GTATCATCAGTGTAGTATATAATTTTACATAAAAAATGGAAAAAATATTCATGATTAGGCTTTCTTTTATTATATAGGAT TTTAGGGGAATTAAAATTAATATATTAATTGTTTATTCATTCTGATTTCATTGATACAAAAAATTTAGTTAACATGAGTT CTTAACTTATAAGAACATAAAGAAAAAAAAAACAACAAAATTCATATCCAAGATATACAATATTTTTTTCTTAATTTATA TACATAGTTAGTGTGCATCTTTTATTATTTAATTTTCAACACGATGCAGATTTTACTTGTTGTGGGGATTTTTGTATGTC AAAATTGTATGAGTTCAAAAGTTTATTGAACTCATACAATTAGGAGTTTTGAGTTCAGTTTATGGGGTAAGACTTCATTT TGCTATTTAATTTTAGTTAAATTTCATAAGTGAGAGTTCAATTGTTGTTTAAGAAAATATATTACCATAACTTTTTAACA AGAAAATTACCATATGAATTTTTCAATACAGATATCATATTAGCTGAATTTAACATTTTTTCATCCAGCACTCAACACCC GGCTAGAATGAAATCAAATTAAAGCAGGCTATAATTTGAGAATTGGAGTTATAAGCATGCCTTTGTTTGTTGGTTTTCTC CAATAACCTTTTATAGTAATACTTGGTTTGAGTAATTATGTGTGTGTGTTTATTAGGGCTGAAGTCAATAATACTGATTG TTGAATGGTGTCATATGAATGTATAATTGTCTTTTTCCCCCATATCAATAACAGCATGGAGAAGATACTGGAGCGCTATG AAAGGTATGCCTATGCAGAGAGACAGCTAGTTGCAAATGATTCTGAATCACAGGTTTGTAATTTGATTTATAATGTTTTA GAAACTTCTACAGTAGACTGACTATGATAAAAACTGTTTTACTATTTTTAATACTAACATTCAGTATATGTTATACATAA TATGATTCTTATGTACTAAAAAAAGAAGCTCTTTTGACTTTTGAATTATATTTTTCTTGATTCACAATAGACAAAGTATA ATGTTTAAAATTTGGATCTTATCTGCTGCCACTGTAACCTCTGTAGCACCAAAATAATAAGTGTATAAATATTTGAGCAA ATTTGAATCAATTTCAACAAATTTATATAAAAATTAAGGGCCAAGAATTTGCAGTAAAAAGTTGTAGAGAATATGACTAC ACATGATCCATTTTTTTCTTGATAAGCCATATGAAATATATTAAAATGAAGTATAATAAGTACTTCAACCCAATTCAAGT AGGAAGAAAAGAAAGAAAATCTAAAAAAATGAACTTTACCAGACAAGAAGAAAGATCCTCCTACTACTGAAGAAACCCAC CACCCACCACCTCCTTGAGAACAGATTAAAAAAATCATGTCTCATTAAAACCTTACCAGGAAAAATCCCATTGAGAAAAC CTGGACAACAAATGATCCATGTTTATATAAAAGTGATGAGAACAAAAAGACATATCTATGTGTTCCTACTTTATCTAGCA TGAATTAAGAAAAATCTAGTCCACAAGAAAATGGTTTAATTTTCTTGCAAATTGATTTTAAGACATGAGAAGTATATTGT GGATAACATGTGCGAAATATTACCTTTTATTAAAAGTAAAAACATGGTTAGTGGTATACTAGTAGTATTGGGTGCATTTT TAGGGAAACTAATCATTTTTCTAATGCTTTAGTTAAGCAAGGGTGCTATGATTTGTGGGATTTAGTAAATTTGCCTTAGC TATATATGGCTTTGATGTAAGACTTTGTCTGTTCTTCTAATTCAATGAATTATGAATTTTTTGTTTTAAAAAAAGGTTAA GTGGTATTCTAGTTTTGTTTCTATTTAGATTTTTTTTAGTAAGTCTAATGAATTAATGAGGAGCACAAGTGGTGCCGCTT TCCAATACTATTTGGTATTTTTATTTAAATATATATGATTTGAGCTGTTTTGATTTTTTTTTGAAAGCTGAAACAAAATT TTACTAAAGTATCAATTCAGTATAAGTACATGGATCTCTAAATTGCAATTTAAAAAGACTTTGAGAAAGGGTCTCATTAA AATTTTATTAGGAAAAATCCAATGGGAAAAACCCTAGAGAAGGAAAAAGAGTACCCAAGTCTCAAAATTGTTTTGAATTT AAATTTAAATTTAGTCATGGATGGATTTTAATTCATCAATTTGTAATGGATTTAGGACACCCGTGCTCCTCTTTAATTTT ATTTGACTTATCATTAATTAAATTGATGGATTTTATTTGATAATTGTCTAAAACATTTTAATACTAATATAATTAAACTC TTCTCTTTACATATTAAACTTTTTTCTTCATATTTAGTGTGGTTTGTTTTTTATATATACTACGTAATGAACCTCTACTC AAATGGTACTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATGATTTTTG AACATAAATTAGTTTGGAAAAATTAGACCAAACACACAAGTGGAACTAATTGTAGAGAACCATTTTCCCTGGAACTTTCA AAAAATAAAATATATATTATGGAACTGATTAGCTAGCTATGTGTGTTCTGTGCAGGGAAATTGGACTATTGAGTATACTA GACTCAAGGCAAAGATTGACCTTTTGCAGAGGAACCACAGGTATCTAATTAAGATACTAATTATCCATGACATAGTGATG ATTTTAAATTCATTCATGACCACTCTCTAACTGAATTATTATGACACGGAACAGGCACTATATGGGAGAAGATTTGGGTT CAATGAGTCTCAAAGAACTTCAGAGTCTGGAGCAGCAGTTAGATACTGCTCTCAAGCACATTCGTACACGCAGAGTACAT ATAATACAACTCCCCATATATTTATAAAGATTTAGTTTACCTGTATTCTTTAATAATGAACTAAGTAGCAATGCACTCTT TTAAAGACATACTATAACGTACTTGTTGTGATCAGTTTATATATCTTTTAAAATATCAACACATTTCTCTCTCTTTTAAA AAATGTGTTGATTTTTCAAAAATAAAATTCAATCACAATAAATATATTGAAGTATGTGATTAGAAGACTAGCTGATGCTA GCACTATTATTCTATAATTTATCTGGTGGGTTCGTTGGAACTGACAATCAAATTTTAACAGAACCAACTCATGTACGAGT CCATTTCGGAGCTTCAGAAAAAGGTACGAACTGCTTCAATCTTATCTCAACTTGGTTATAAGTTATAACGAGTAGTTGAA GGAGAACATGTTCGATTACGTGTCTTGCTAGCTAGAGAACACAACCAAGAAACTGACATGTGCTCTCCTTGAAATTATAC GACAGGAGAAAGTGATTCAGGAGCAGAATAACATGCTTGCAAAAAAGGTGAGCAAGATCATCCTTAACTATTTATTTATT TATTTATCTATTTACTGGGCAACCATAACTTTTCCACTTTTTTAGTGTAACTTAATCCTAATTAATGATTCTTTCTTTGT AACTATTATATACAATAAGTCTTCATTTGCTTAATTATAAAAAAACAAAAAATCTTCATTCACACCTTAACAACACGTCA ATCAATAAGGAAAAAAGGAAGAAATGAAAGATATGAAGGTGATATGTATTAGAAGTCCCACATTGGATAAAGATAAAACA TAGATAACCTTTATAAGAGGTAGTGCAAACCTCAACTCTTGAGCTAGCTTTTGTGGTTCAGTATAGGCATCCCAATTTCT AATATGGTATCAGAGCAGGTCTGATCCAAGCCATGACTTCCGCTTTCAAAAAGAAAAAAAAAACGGAAAAAAAAAGAAAA GAAAAGAAAGTTGTATCCCGCTGGAGTACTAGCCCAGACAAAGAAAGTCGAAAGGCAGACTCAGACGAAGGAGCACAAGT AACGACGACCACGGATGTTCCAACTGGAGTACAAGCCCAGGCAAAGCAAGTCAAGGCCTCTGACTCAGACGAAGGAGCAC AAGTCCAAGGAACTCCGATGTTCCCGCGGGAGTACTAGCCCAGATAAAGAAAGTCGAAAGGCAGACTCAGACGAAGGAGC ACAAGTTCGACGACCACGGATGTTCCCGCTGGAGTACAAGGCAAAGGCAAAGGCAAAAAAAAAATGGAGTCCCACTTGAG GGGAGAGTAATAGAGATAACAAGTGGTGAATCAAAGAAGTCCCACATTGCCTAGATCAACTAGTGCACAAGTGTATATAT AATAAAGAACACACACCCATTGCCTTAAGCCTAAGGTTTTTTGGTGTGTGGTTCTATAGGATTTCTAATAATGTGATAGA AATAAGAGAGATAAAAAAAAGTGAGGAAAATGAGATGGAAAAAAAATAGAGGTGTAAATAATTTAAAACTCTATTCAAAA ATATTTGAAACTTTGGATATATCCCACTCAATTAGCCAGAATTGAAAAACTAGCTAGATGTTCACCATTGCTTTGCCAAT TTTTTTTTTGATAAGCCAAATGAATATATTGAATGAAGTACAAGGGGTACTTCAACCCAATACAAAGAGGAAGAAAGATA AAGTAGTAAGAAAGAAGCAAAAAACAGTGAAAAAACATGTCAGGAATAAACCCCCTCCTCCTTGAAAGCACAGCATAATA AAATATGCCTCATTAAAACCTTCCCAGGAAAACCCCCTTGGGAAAAACCTGGAAAAGGAAAAAGAGTACATATTTTAGAA GGCCATAACAATACCTCCAAGGAGAAATTACAAAACCAACCCACTAATTGAAACTGAATGAAAATAAATCCATAGCACTA CCACCCGAAGCCAGTTTAGCAGTACAGCTTCAACTATATCAAGCAAAGATTCCTTTACACCAACAAAGCAGCTAGTAAAA ACAAGGCATGGTATCAATCCCCCAACAAATCAACCTAGCTCCACCATAATATAGCAACAACTCCAAGCCTAAGAATATTA AGCCAGTAACAGTACCAAAAAGACAAGGGATTCAAGCAATATCAAACGTCCCCACAGAATAGCAGTCACAAAGCTGTAAT ACAACAAATAGGATTCAGAATCCTATCTGAAGAAGAGGCCTGGAAATTCCTCCCCTTAGCTTTAAGCCATAGCCAAACTT TAAATTGTATCAGTTCTGTAATTTTTCAACATCCACCACACCACCTTCAAAAATTGCTTTGTTACGATAAAACCATAAAG AGGATATTGCAGCAATCCACAGCAGAGTTGATACACATTTCATATTCTTCCCTGCCCCTAAGATGAAACCAAAATGGAGA AAGTGAGCTCTGACATTCATCGGTAAAACAGTACTTACCCCAAGCCATCTACATAATTTCATCCAAACCTTCCAAGCTAT TGAGCAGGAGAAAAAGAGGTGAGATACTGATTCATCCTCCAATAGACACAATCCACATGAGATCCCAGAATTAGTCGGGA TGGCATTTCTTCTAACCAATTCAACTTTAGTTTGCACTTTATTAAGGAGGACCCTCCAAGCAAGTGCTCTCGAATTAGAG GGCGCTTTAGCTCGCCACAGATTATTAAAGAGACTCCCTTTGTCCTCCAGGACATCCCCTTGAAGTACTTCATATGCTGA CTTCACAGAGTAGGAGCCAGAGCCCTCTTTTATCCAAGCCCATGAATCGCCCTGCCCCATTTTAGGAGAGAAGCTTCTAA GTAGTCTTTTAAGCTCATCAACCCGCTGTAATTCTCTGTCAAACAGATTTCTTGTCCATGAAAAACGCCAGTGCCAGACC CCATCGCTCCACTCCCCCATATCAAAGACTGAAGCATTCTTTTGGGAAGAAAGAATATACAACCTTTGAAAATTGTCCTT TAAGACACCCGTTCCCCACCAATCCTCTTGCCAAAATAATGCAGATTTTCCATCCCCTATCCTCCTACTAACAGCCTCAT CAAACCGCCTCCCATTAATAGGACCCGAACAAACAGACATCAAATCTTTCCACCAACAGGAGTCCTTATGAGAAACCCCT CCATTGTACTTAGTATTCAGAATTCGGCACCAAAGGCTATCTTTTTCCATCATCATTCGCCACTTCCATTTACCAAGTAA AGCCCAATTAAAAAGTCTCCAATCTCTGATGCCTAAACCACCTTCACTCACTGGCCTACATACTTTTTCCCATCTCACCC ATGCAATTTTATCCTCACCTTCAGAACCTCCCCAGAGAAATCTTCTCAAAATACTATTGCATTTAGCAATAATCCCAGAA GGCATCTTAAAAAAAGACAAATAATAGAGAGGGAGAGATGAAAGGACAGCTTTAATTAGACAGATCCTACCTCCAAAAGA TAATTGTCGCTGCTTCCATTTAGATAGTCTCGCTCGCAGCTTACTGATCATCGGGTCCCAGAAAGAGAGTCTCCTGGGAT TGCCTCCCACCGGAACACCAAGGTAGACAAAGGGGATTTGCATTTGCTTGCAGTGCAACATAGAAGCTGAACTAATAAAC CAATTATTCTGAACATTTACACCTGCCATCTTGCTTTTAGAGAAATTAACCTTCAAGCCAGCTATCAACTCGAAACACCT CAGCACACATTTCACAACAAATATATTCTCCATCGACGCCTCACCAATAAAGATAGTGTCATCCGCGAATTGTAGGAGGG AAACCATAGGACCATCTGCTGTTCCAAACTTAAAAGGGGAGAAACGACCATTTTGTACAGCTTGCTTGAGGAGACCGTTG AGACCTTCTGAAATAATGATAAACAGAAACGGAGCTAATGGGTCACCTTGACGAAGGCCTTTCTCCATTCTAAACTCATC TGAGGGGCTTCCATTAACTAACACAGAAACAGATGTGGACTCTAGGCAACCTCTGATCCAACTCGCCCATTTTTCACCAA AGTTCATCCGTCTAAGCATATAAAAGAGAAAACCCCACTCAACTGAATCGTACGCTTTCTCATAATCAATTTTTAAAACA AAAGTTGGTTTCTTCGTTCTCTTCGCCTCATGAATTACCTCATTCGCCACAAGAACACTATCAAGCATATTCTTCCCTCC CACGAAAGCAAATTGACAGTCATCAATAACATCAGAAATCACACCTTTGATCCTGTTTGCAAGAACTTTGGAAATCACCT TATACATACAATTAACTAGGGAGATCGGGCGGAATTCATTCAGACCTTGAGGAGAGCTTGTTTTTGGGATCAGAGCTAAA AAAGAGGCGTTAGCTCCCCGGGGCCACACCCCATTCTTATGAAACTCAGCAGCTACTCTCATAAAATCATCCTGCATTAA ATTCCAGAAAGTTTTGATAAACCTGAAATTTATTCCGTCAGGTCCCGGACTTTTGTCGCTTGCACAACTCCAAACAGCCT CTTTAATTTCTTCAGCTGAGAACTCATCCTCCAACAGACTCGAGGTCACCTCAGATAAAGACTTAAACGGGACGCCATCC AGTCTCGGACGTGACCACCCTTCACTTCTGAATTTTTGAGCAAAGAAGTTTTTTACCCCCTCCTTCACAATAGGAGGGTC TTCCACCCAGTCACCATTCAAAAGTAAACCAAGAAGAGCATTTTTCTTTCTCCTATAATTCACCATCGCATGAAAGTACT TTGAATTAGCATCACCCATCTTCACCCAATTAATTCTGGATTTTTGATACATAAGTGATTCAATCATGTGGGCACATTTC CAAAATTCAGCACCACTATCCTTTCTCAGGGCAATTTCATTCTCCTGAAGTTGGAACTCCTCCGCCTTCTTTTCAAGTTC ATTTAGTCTAGCCACTGCTTCTTTTTTTCGCTTGTACAGATCACCAAAAACATCTTGATTCCAAGTCTTGAGGGTGCAAG CTCATTCAATTCTCTAAAGACATATTCACCTCAAGGCAATTCACTTTTTCTCTGAGATGATCGATGGAACTTAGGCTATC AATTAATTTCCAAGGCCTTGCATAATTGGTATTCCTATGTTACTATTTGCTTATGAAATTCAAGAAAAATTCACATTAAT CACCTCCTTGATACTTCAAACCAAGAGGTGGTTGTCATCCCTAAGAAATGGGAGCTCGATGCATGTTATCTATATATATA TAGCCCTATTTCATGGAAGGTTGATACACACTCTTGATCTAAACATGTGTTTGTAAAACCAACATATAATATTATATTGT GTGATTTGAAATTAGATCAAGGAGAAAGAAAAGATTGCAGCCCAGCAGCAGCACGCACAATGGGATCATCCAAACCATGG AGTTAATGCACCTTTCTTAATGCAACAGCCACTTCCAACTTTGAACATGGGGTAACTTTTCTGTAACATGATATTAATTA TCTTGTCACATCTTCGTTAGTTAAGTTCAAATTTTCTGCTACTAACTGCTACTTTCAATGAATATTGTTTTGTCAGTGGC AATTACCGTGAAGATCATGCTCCAGATGTTGGCAGGAATGAGCTTGACCTGACTCTGGAACCTTTGTATTCCTGCCACCT TGGATGCTTTTGAAAACTTTACTAGCTGCAGCCATCTCATATTATAATATTTAGATCTGGCCTCTATGTCATGTGGTAAT TTTCCCTACTTTAATTTGAAGACCTTATTAATTAGTGTGTTGTAAGTTTATAACTTGATTATAACTAAGGCTAGGTTTCC AATGTCTAAGCTTTGCTATGTGCAATTAAGCTGCTCAAAGACAAGTCATATAATGAAATTTGAGCTATTTAGTACATGTT TCTAGTAGGAGGAAATAGTAATGTGATTTGACTGAAGTACTTCAGGTGTAAATGAAGAAATTAAAATTTATTATGTTGTA TTTAAAGTGGATTAATTTGACACGTTGATTTCAACGTGGATCCACGTTTTGTTTAATAGAAATTCAAACTGTAACGCTTC GACTTTTGAGGGTCACAATAGTAACC
CDS sequence (LotjaGi4g1v0168500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAGGGGTAGAGTTCAGCTGAAGAGGATAGAGAACAAGATCAATCGGCAGGTAACTTTCTCCAAAAGGAGAGCTGG GCTTCTCAAGAAAGCTCATGAGATCTCTGTTCTCTGCGATGCTGAGGTCGCTTTGATTGTCTTCTCCCACAAAGGAAAGC TCTTTGAATATGCCACCGATTCTTGCATGGAGAAGATACTGGAGCGCTATGAAAGGTATGCCTATGCAGAGAGACAGCTA GTTGCAAATGATTCTGAATCACAGGGAAATTGGACTATTGAGTATACTAGACTCAAGGCAAAGATTGACCTTTTGCAGAG GAACCACAGGCACTATATGGGAGAAGATTTGGGTTCAATGAGTCTCAAAGAACTTCAGAGTCTGGAGCAGCAGTTAGATA CTGCTCTCAAGCACATTCGTACACGCAGAAACCAACTCATGTACGAGTCCATTTCGGAGCTTCAGAAAAAGGAGAAAGTG ATTCAGGAGCAGAATAACATGCTTGCAAAAAAGATCAAGGAGAAAGAAAAGATTGCAGCCCAGCAGCAGCACGCACAATG GGATCATCCAAACCATGGAGTTAATGCACCTTTCTTAATGCAACAGCCACTTCCAACTTTGAACATGGGTGGCAATTACC GTGAAGATCATGCTCCAGATGTTGGCAGGAATGAGCTTGACCTGACTCTGGAACCTTTGTATTCCTGCCACCTTGGATGC TTTTGA
Protein sequence (LotjaGi4g1v0168500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATDSCMEKILERYERYAYAERQL VANDSESQGNWTIEYTRLKAKIDLLQRNHRHYMGEDLGSMSLKELQSLEQQLDTALKHIRTRRNQLMYESISELQKKEKV IQEQNNMLAKKIKEKEKIAAQQQHAQWDHPNHGVNAPFLMQQPLPTLNMGGNYREDHAPDVGRNELDLTLEPLYSCHLGC F
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 60 | 60 | 7.7E-41 | ||
| ProSiteProfiles | 1 | 61 | 61 | 32.394 | ||
| SUPERFAMILY | 2 | 92 | 91 | 4.97E-34 | ||
| PANTHER | 2 | 201 | 200 | 8.0E-108 | – | |
| PANTHER | 2 | 201 | 200 | 8.0E-108 | – | |
| CDD | 2 | 79 | 78 | 1.19691E-44 | ||
| PRINTS | 3 | 23 | 21 | 3.7E-31 | ||
| ProSitePatterns | 3 | 57 | 55 | - | ||
| Pfam | 10 | 57 | 48 | 1.3E-25 | ||
| Gene3D | 13 | 78 | 66 | 1.6E-28 | ||
| PRINTS | 23 | 38 | 16 | 3.7E-31 | ||
| PRINTS | 38 | 59 | 22 | 3.7E-31 | ||
| Pfam | 84 | 172 | 89 | 1.6E-30 | ||
| ProSiteProfiles | 88 | 178 | 91 | 16.938 | ||
| Coils | 125 | 145 | 21 | - | – | |
| Coils | 151 | 181 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA polymerase II regulatory region sequence-specific DNA binding | Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Positive regulation of transcription by RNA polymerase II | Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi4g1v0168500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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