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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0204200 |
| Transcript ID | LotjaGi4g1v0204200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leukocyte receptor cluster member 1; TAIR: AT4G16535.1 leukocyte receptor cluster-like protein; Swiss-Prot: sp|Q96BZ8|LENG1_HUMAN Leukocyte receptor cluster member 1; TrEMBL-Plants: tr|A0A0A0KKV3|A0A0A0KKV3_CUCSA Uncharacterized protein; Found in the gene: LotjaGi4g1v0204200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:47381239..47385451) extracted from Lotus japonicus Gifu genome v1.2.
ATTAGAAACAATTTTATAGTAGCAGATTTTTTAATAAGATTTTAATTGAATTATAAAATTAAGGCTGGAATGTGAAATCA ATGTAGAGTATAAGGCAGTTGACAAATCCCAATAGGGCACAATAATCATCTTCAATTCATCCTCCAAATCCAACTTGTTA CAGTGGTGGCGGTGAATCCTTCAATCAATTGAACGATGGGTGGTCACGGCGGCCTTAACATCCTCCCTCAGAAGCGATGG AACGTATACAATTTCGACAACCGAGAGAAAGTTCGCCGCGACGAGGAGGAAGCCGCCAAAGAGGAACAGCTTAAGCGCGA GCAGGCGCGAAAACGCGACACCGAGTTCCGTCTCGAGCGCCTCCGCACCGCTAAAGGTTTAGCACCGTCGATTCCGCCGC CTCCAGAATCGTCAGAACCCGAGGTGGCTGCGGATCCGGGTCACATCAACCTCTTCGAAGGGATCAAGATTTTCGACCCG GTGAAGAAAGAGGGTGGTAAAGAGATAGAGGGGGAGGATTCAAGGAAGAAGAAGAAGGCGAAGAAAGAGGAGGTTCGTGT TGTGGGTCCTGAGGATGAGAAGTATAGGTTGGGTTATGGGGTTGCTGGGAAGGGGGTTCAGTTGCCGTGGTATGTTCGGA AGCCAATTGGTAATGTTGATGATGATGTTGATGATGGTGGAAGTGATGGGAAGGGTGAGAAGAAGAAGAAGCAGAAGAAG ACATTGGAGGAGTTGAGGGAAGAGAGGGTGAAAAGGGAGAGGCGAGAGAAGGATAGAGAGAGGGCCTTGATACTGGAGAA GAGGAAAAGCGAAAGAGATGTTTACAGAAGTAGTAGGTTCTCCAGGTGAAAAACTGCTTTCTTTTTCAATGTTTTGATTG ATATGTTATTGTTAGGTTCTACATGGTAACTTAAGAAGTTTTGTGCAATCTAGGATTTTCAAACAGACATGAAAGATATG TAATTTTGATTTAGTAGTCTTTTGTATAAAGAAAGATGGGTTCATATAATTAATCATGTTGGTATCTGGTTTTGTTTAGA TTCATGGTAGTTATTTCTTATCTATAGGCTATAGCTGAATTGACTTGCATTGGTTGTGATTCTATCTCTCTTGATATGTT TGACATCTTTATGGAAATTGGCTGAACTGGATCTTATTTGATTGTTAGTAGGCCATGTTGTTAGCTGTGAATTTTGGATC TAACTTATGAATATTTTTCGGGTTTCAAATGCATCAGCACCATGCATTCCTACATTGAGCCTTCCTTAGATTAAATTCTT GGATTATGAGTTAAAACTTGCAACTCTGCCTATGGATCAAACGTAAAATTGGCCGTTATCTGTATTATGGATCAAACTCG ACAGATTTATGTTAGTGATTGGCCGTTACTTAACGACCAACATAAATAGAAATACAATAGCTGAAGAATGCTTGATTAGG TTTCGTTTTTGGAATATTGGTACCTTGACAGGTATATCTTTGGAGGTGGTGGACACAATGATTGAGAGAAGGATTAATAT AATGTTAAACTAAATGGGTTGGGATGCAAGCTAAGGAGCTAGGTACTATAGGATTTAAGCTTTGGTACACAGGGAAGGTC AGAGGAAGGAGCAATGTTCGTATTATTGTGGACAAGAACTGGAAAATAGAATGTAGTGGATGTCAAAAGTTTTTAGGATC AGATCTTATCTTTAAAATTGTTGGTGTCTCAATGATAGGAACCCAGATATTAGTAGTCCTAGTATTGCTAAGGTATTTGT TAGGAAGGGTAGAAAGGGAAATAAAATTGATTCCCACTAGTGATAACTGCCAAGCTGATGTGGCAGTATCTTCAGGGTGC TAGGAGTGTGAAAGAGAGAGAATGCTGAGGAGAGAATGGCTATATAAGCGTGTATTGTGAGAGAGAGGTTAGGCTTGAAT TGGGTTTAGGCTTGGGACTTGGGAGAGAATAGAGGCACTCTCTAATTTGCCTCTGCTATCTTTTCGTTTTTCCTTTTCCC TGTAATCTTCTGCAGCACTGCTTCTGGGTTTCTACCAGAGGGTTCAGTGATATTATGCAATTCCATCTCTATTTTCTAGT TCTATTCCTAGTATCTAACTTTGTTTCTACATTTCCTTGCTGAAAACCGGGTTCCTAACACTCAATAGACTATTAATATC ATTGGTGCTTACGCCCCTCAAGTAGGATAAAAATTTTGTGAAAGAAATTTTTTGGGATGATTTGGTGAGTTTCGTTCAAT GTATCCCACAAGAATAGAAATTGGTCATAGGTGATGGTCTAGATAGATACGTCGGTTTGGAAGCAAGGCATTTTACTAGA GTCCATGGAGGTTTTGATTTTGGGGAGCTAAATGAAGAAGTGCAATCTATTTTAGATTTTCTATTGCATATGACCTCAAG ATTTTGAAAACTTGTTTTAAAAAGTGGGATGAACATCTTATCACCTATAAGAGCAGGATCTCGAGGTCACAATTTGATTT CTTTTTAGTAAAGAGGTTAGATGTGGTAATATTCGGAGAGAGCTTGACTACACGGCATAGAGTTTTGGTCCTTAATGTTA GTTTTAAGAATCATAAGTAGAAAAAGGTTCCTAGTGCTCAAATTTTCACAATCTGGTTGATCATGGCAATGGTAAAGTGT ATAATCAGATTTTGCTAGTAAGAGGAATGTTGTAGGAAGGAATATTTGGATCATTATTTGTTGGATCTCATAACAAGGAA ATAGGATGATTGTTTATATACTGTTATTGGTTTACATGGCATAGAGGTTGTAGTTTTTGACATGTTAAAGTTTGGTTTTG TGGTGTAATAGTTTTACTGGCAGAGTGGCGCCTGTGCTTGGATTAGAATAGAAAGGGTTGCAAATTCATAAAAATTAGTT GAGCTATTAATGGACAGAGCAATTGCATATGCACAAATGTGGATCAATGCAAAGCTGCTGTCCTACTTGTTCTAATGAGA ATGATGTTGGTTAATACTTAATAGTTATAAGATTTTGGCACCACAGTGATAATACTTGAAAAGTGAATGCTATGGCTGGT TTTTGAATTAACAATAGGGTTCCTCTGTTTTCAATACTGTGTTAATGAAATGGCCTGTTCTATTGTTTTACAGGAGATGA TCGAGCCAAGTGGTCTGGGTTTATTTAACAATGTTCTCTCGATATGTTGTTGCACTTTGTAAACTCCCTGGATTTCCTTC ATGGTATGGAATCATGCTGGATCCATTCTTGAGAAATCTATAACAAATCCTTGATCCATAGGCCCTCTTCTCCCTTTTCA AGATCATTATGACATTGTGAAATAGGGAGTGGTATGGGTGATGGATAAATCCGCCCAAGCTCGTACACCTGTAATTAGAT TTAAGTCCTTTCTGTCCAGTAAGAGGATCAAAATCAAATTGCTTTACCAAATGAAAATGAAAATAATAATTTCATTTTTG TTGTAATTATTTATGTTTGGTTTGGAGTTTTGTAAGGCTGTGTTAGCTGATTTAAATGCGGAGCTAGGTTTTAGTCATGA GAAACGCTAAATAGTTGCAACATTCTTATGTTTTGATTGAAGTATTTCTTGAGTTTTCTAGCATGTTTGGATTAACTTCT ACTTTTTCAGAATCAATTCACCCAGAAGCTGTTCACAAAAGTTTCTTCCAAAAATTTATTTGAATTTCGAATAAATTCTG GAAAGATTTCTGAACACGTAATTTATTCTTGCTGGGGCCTGGTGTTTTTCACGCTAGTTTTGGTGCTGGTATATGAGTGT GCCTCGTTGGATAATTTGGTTCAATTGCTGCTACTGGAAGATCATGTGTCGTGTGCTGTTATGGGGATGCATTGGTTGGA TTTTTCTTTGTTACTTGAGGGTTGTATTTATCTTGCAGCTGTAAATTAATTGGGGGAGATTCAAAGTTTAGGATCATACT TTGAATCTGTTTTGCTGTTTTTTGCTGGTTTTTCTGTTATTTCTTTTTTCTTCTTCCATCTTCTCTTTGTATTGTTAGCA CCCCTCGTGTTTATTCAATATATTCTTGGCTTATAAAAAAAATCTTTTTTTTAGAAGAATGCAGTTGTTACGTTTGAAAC AAATCTCCTAACGTTAATGCAATAGCTCGATGTTCAAGTGCCTTCATGTCCTCATCAATTTTTATTGTTTTGTGGTTAGC ATGTTGGTTTTGTTTTGTTTTTTGTTGAGAATTATTAGATATCCTTATTTGCT
CDS sequence (LotjaGi4g1v0204200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGGTCACGGCGGCCTTAACATCCTCCCTCAGAAGCGATGGAACGTATACAATTTCGACAACCGAGAGAAAGTTCG CCGCGACGAGGAGGAAGCCGCCAAAGAGGAACAGCTTAAGCGCGAGCAGGCGCGAAAACGCGACACCGAGTTCCGTCTCG AGCGCCTCCGCACCGCTAAAGGTTTAGCACCGTCGATTCCGCCGCCTCCAGAATCGTCAGAACCCGAGGTGGCTGCGGAT CCGGGTCACATCAACCTCTTCGAAGGGATCAAGATTTTCGACCCGGTGAAGAAAGAGGGTGGTAAAGAGATAGAGGGGGA GGATTCAAGGAAGAAGAAGAAGGCGAAGAAAGAGGAGGTTCGTGTTGTGGGTCCTGAGGATGAGAAGTATAGGTTGGGTT ATGGGGTTGCTGGGAAGGGGGTTCAGTTGCCGTGGTATGTTCGGAAGCCAATTGGTAATGTTGATGATGATGTTGATGAT GGTGGAAGTGATGGGAAGGGTGAGAAGAAGAAGAAGCAGAAGAAGACATTGGAGGAGTTGAGGGAAGAGAGGGTGAAAAG GGAGAGGCGAGAGAAGGATAGAGAGAGGGCCTTGATACTGGAGAAGAGGAAAAGCGAAAGAGATGTTTACAGAAGTAGTA GGTTCTCCAGGAGATGA
Protein sequence (LotjaGi4g1v0204200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGHGGLNILPQKRWNVYNFDNREKVRRDEEEAAKEEQLKREQARKRDTEFRLERLRTAKGLAPSIPPPPESSEPEVAAD PGHINLFEGIKIFDPVKKEGGKEIEGEDSRKKKKAKKEEVRVVGPEDEKYRLGYGVAGKGVQLPWYVRKPIGNVDDDVDD GGSDGKGEKKKKQKKTLEELREERVKRERREKDRERALILEKRKSERDVYRSSRFSRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 217 | 217 | 1.1E-79 | – | |
| PANTHER | 1 | 217 | 217 | 1.1E-79 | – | |
| SMART | 14 | 50 | 37 | 9.9E-7 | ||
| Coils | 26 | 59 | 34 | - | – | |
| MobiDBLite | 27 | 81 | 55 | - | – | |
| MobiDBLite | 27 | 57 | 31 | - | – | |
| MobiDBLite | 98 | 124 | 27 | - | – | |
| MobiDBLite | 151 | 197 | 47 | - | – | |
| MobiDBLite | 152 | 197 | 46 | - | – | |
| Coils | 163 | 197 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0204200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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