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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0207000 |
| Transcript ID | LotjaGi4g1v0207000.11 |
| Related isoforms 10 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Oxysterol-binding family protein; TAIR: AT4G22540.1 OSBP(oxysterol binding protein)-related protein 2A; Swiss-Prot: sp|Q940Y1|ORP2A_ARATH Oxysterol-binding protein-related protein 2A; TrEMBL-Plants: tr|A0A072UPM8|A0A072UPM8_MEDTR OSBP(Oxysterol-binding protein)-related protein 1C; Found in the gene: LotjaGi4g1v0207000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:47959734..47966494) extracted from Lotus japonicus Gifu genome v1.2.
ATGCTCGCTGAGTTCTCTGAATTACAAGAGCAGCTCACAGTTCTTTGTGTTGAACGGTCAAATTTGCTTGATACAATAAG ACAGTTGGAGGTAAAATTTTTAACTTGGCTTCTGTGCTTTACCCTTTGAATGCTTCTGACAATTTCCTGTATTTGCGCTT CATTTGAGATGTTGAAAATACTAGTATTTCTTGTTAACACACAAGACGACAACTCCTCTATTTCAATTTTGGTTGATAAA AACATCTAGCTAGATTTCATAAAATTATTACTACTATAACTTTGAGTCCAAGTGATTTATTTCTGAAGTGCTTGTTTTTT TTCTTTAAAAAATGAACTTTTTAATGAGGGTGATAACTTGGATGGGTCAGTTTTCTCTACCAAGGCAGCTTGACAATAAC ATTCATTGGAATATAACTTGCACAATATCCTAAAAGTTTCTTTTAGGACATTCAGTGATGAGACTTATTTTATGTAACGC TTCAGCTTTCACTGTTTTAAATTATTATGGCTTGTTTTATTTCAAACTTTTGCTTTAGCTCCCCAATAATACTAATTTGA ATAACTTCACTGTATATTTTCTTTTAGAATCTTACATGTAATTTAATGAGATGAGATCTCTTGTCATGGTTCTATCCAAT GCTAAAAGTTGTATAAAATGAACTATTTTTTTCATACCCAAATAACCAAAACTATGAAAATGTTTTCAGTACTACAATAG TATGTACTCCATCTATTTAAATACAATCACCTGGCCATATATGGTTTTTTTATTTGTTGTGTAAGAAAAAGGAGAATTAT TGAACTAATTATCACACAAAGGAGTTTGAAATGAATTATTGGACATTATTGTTGTACTTCTGAGTTTGTATACATGGATA TTTACTTGATTAAGATATTTGTGGCTGTAGCTTCATATGACGGGATAAGCTGTTAATGTATTAGTGCAACGCAAGCTAAA GTTGTATTTTTTTTTTTGATAGAAACAAGAACTTTGTCCAATTATGTATGCAGTATGCTACTACATCACATGCTTACCAA AAAAAAAATGCTACATCACATGATATGTTTGTTTAATTTTGTCATGCATTTTGGCTGATTTATGGTAAATTTTCCGAAAG TCTTGTCACTGGTGACTTTGTTTGATAGAGTTTCCTGCCTCTTTCCCCACCCAAAGAAATATCATAAATAATGGTACATA TTGATTACCATTCCCCCCCCTCATATTTATTTTTCCTTTCTTTCCTTGATTTCAATAGTCTTTTCAGTATGCTGATTTTT GCATGTCAGCATGTGTTTAGTTTCTAGATGTGGAAGGTTCATGCCTTTGTCTATGACTTGCTAAACTAATATTTGTTACT GATAATGAACAGGCAGCTAACATTGAACCTGAGGCCTCTGCCTTGCATGACAGTGAATACCAATTAACAAAGAATGCACT GTCAAGTCTAGGACGTGGAAAATATAGTGGTACAATGTTATTTGTCACTTATGCTTGTCATTTTAATATATACATATGCT ATGACCTTTCTTTTTCTTATTTGATGTGATAAGCATGTGATTGTAGTTAGAATTGTTGTCTGTCTTATATGAACATGAAA ATTATTGACAGCTATTTGTGAAGTCTTTCTGAATCATGGAAAGTATTTGGCTAATTCTCATTAACTGCATAGTTTGAAAT CCACCTCGTATCAGTAATTTGAGTTATATTCCTCTTGCTGCTGTTTTCACAAACTTCTAAAGAACTTAATTTTTTTATTA TTTTAACTAACTTTTAGCTGCAAGTATGTTTTGATTAAGTTAACATTAGTGGTAGATCCTGGCTCAGGTGAGTCAGGTGA GGAGAAATCCTAGCTCTATACTTGTTTTCTTCTGTTAATTTCTAGTTTAGTCTGTTAGTCAATGTATCAACTTGAGGTAC ATAGTTAACTCAGATTTTGATTCATTTAAAAAGAAAAAATAATAATTCAAAGACGAGCTATTTTCATTGATTTCTCCTCT TTGGATGCTGTATGATCATATGATATAGCATATTGTCTTCTAATAACTGCGGTTATATATATTTGGGTAAATTTTTTTAC AACGATCATGTCTGCAACCTTTGATATATATCTCATTCTCAGTACGTAGTATTAATTTTAACCCATAGAGTTGTCTTTCA GAATACAGTACAACTGAATCATCTGATGATATTGAGAAACAAGAGGTGGAGGAAGTGTCAGATGAAGATGAAATCTCATA TTATGATTCTAGAGAAGATTTTACAGAACCTGGTTTTATTTGTGGGTCAAAAACAGCTTTGGATCAAGTGAACACTTCTG CAGAAGTTAATACAGAATGCATTGATATGGAGAACAGTCATGTCGAAAATATGATCTCTGATTTTGGTTACCCTCAGATA GCAAGGCGAAAAAAGCTTCCGGATCCTGTTGAGAAAGAGAAGGGCGTTAGTCTTTGGTCAATGATCAAGGACAATGTGGG CAAAGATCTTACACGTGTTTGTCTTCCTGTATACTTTAATGAGCCAATATCTTCCCTCCAGAAATGTTTTGAAGACTTGG AGTACTCTTATCTTCTGGATCGCGCTTATGAGTATGGAAAATCAGTAAGATCTTGCTCATGATTATGCCATTCACTGATT CACATGTTGCTTGTGATTATGCCATTCTCTTGTCTTGCAGTGTAAACAAAACAAATTTCAAACTAGTGTTGGTATATGAC TTTATTGTCCATCTGATAGTGCTGAATGAAATGTATGCATTGTCCTTCAAGGATAATGATTTTTAGCAATTTGATTGGTA ATATTGGTAGATTTGTTTCTGAACTTTCTAATAATGTTAAAAGGTTTCATTTACGCTGCTACATTTTTTTTCTGAACTTT CTAATTTTCTCAAAATTATTGTTTTAATGGGAGAATGATAATTGTGTTCAGTCATGTCATTTGTTTTATGTTTGTGTGGG TTGCAGGAGTTGGACTGATTTCTGAATTTCACTTTACCGTACTTAACGGGGGAAAATGGGGAAAGATAGTTGTAATATCT CATGTTAAATTCCACTAAATTGGTTTATAAAATAAAATACACCCTTAATAGTGTAATTAGACTTTTTTGGTCCCTGGTCT TATTGCCTCATAGTTAACTGATATATTTGCTTTCTATATGGTGGTTTTTCACTTGCCTTATAGTCATAGGAGTTTCTAAT AATAATCCAAGGAATTTTCATTAGTTTGGTTTTTGTTAAGTTTTTAAAGCTTTTCCTTAATTCAAGTGAAAGATGACATT TTTTAATACTATTCATGTGGTACTTTTAACTAACTGAATTTTATTTTCAGGGAAACAGTCTTCTTCGAGCACTATACGTT GCTGCCTTTGCAGTTTCTGGATATGCATCATCTGAAGGTCGTCATTGCAAACCCTTTAATCCCTTGTTGGGGGAAACTTA CGAAGCTGATTTTCCTGACAAAGGAATTCGGTTCTTTTCTGAGAAGGTTAGCACTTTATGATTGAATGATGGCGAGATTT TGCTGAGATATAGGTTGTCATCCAACAGTGTATTTGACTTGAGCTAACAAATGTACTTTGATAATATGACTTTTTTTTTT TACGGACGGATAATATGACTTTTCAGTTGTAAACTTAGAAAAAAAAATAGATTTTAAAGAAACTTGTTAGCCTTTTTTTG AGAAGTGGGGTGAAAGTAACGAGAATATTGTATTAACTGGGCTTAGACGTCCAATTGTGATGTCTGAATAAGAATGGTTT TGTTATACTCAAGGTTTTAAAACACCGTCCACGAGTGATTGCAGCCGCAACAGCATGGTTTTGGAGGTTAATCGTGACTT CAATTCTGGTCACTTTAGCTGCATTTGTTTGTAATTTTTTCATAAATTGTGTGATTGGATACCAATTGAGTGCAACATAA ACGGATTTTCATTCTAACACATAATAGAGCTCCATTCACTATTGTCTTGAAGTGGACGACTGTTTGAACTGCTGCAAATG TTAGACGTAACATACCTTATATCTTGTAAACATAACCACAACTGTGATGCCATTCTTTTGGTCATTGAGTTCGTCTGCTC AAATTATTATAAGCCCAAAGATTGTTGGCCGATATATGTTTTCTCACAATAATTATACGTGAAACAGGTTAGTCACCATC CAACTGTGGTTGCCTGCCACTGTCAAGGTAGAGGATGGAAGTTTTGGGCAGACAGTAACATTCGCTCAAAGTTTTGGGGA AGGTCAATTCAGCTTGACCCAGTGGGAGTTCTGACCCTAGAGTTTGATGATGGAGAAATATTTCAATGGAGCAAGGTGAG AATCATGAATGACCCTGTTTGCATGGTCTATTATACTGCCCACTTGTTCTGATTGTTTGGTTTCTCAATTCAATCTTATA TCATACATTTATTCTTATAAACTTATACTTGTTGTTTTTCCTTTAGGTTACGACTACAATTTATAATCTTATCCTTGGCA AAATATATTGTGATCATCATGGGAATATGGATATACGGGGTAATCGCCAATATTCAATCAGACTCAAATTCAAAGAGCAG ACTATTCTTGACCGAAATCCTCACCAGGTAAGGTTTTTCTACTGGTATTTACTAATTAACTAACAACTTCTACTTATCCT TTGGATCCTGGTCTGTCGTTTCTAGTTTATTCATTTGCTTGTTCATTATTTTATTTCCTAATGTGTGTCCTCACATCTTA TTCATTAATGTGTCCTAATGTGTCCTATGTGTAATTAGGTGCATGGATTTATTGAAGATGCAATGGGAAAAAAGGAGGCC ACATTGTTTGGCAAGTGGGATGATAGCATGTATTATGCTAGTGGTGATGTGAATGTGAAGCCAAAAGATTTCACTTCATC AGGGGCAACCTTGTTGTGGAAAAGGACTAGACCACCCCCGAACCTCACTCGGTACAATTTGACATCATTTGCCATCACGC TGAATGAGCTCACACCGGGACTAAAGGTACTATGACGTATTGAATCATGATTCGATATGCATTTTCCTTTATCTTCTTAT GCATCTCTAATTCTTTGTTATAGCCTTTTCTGATGGGTATTTGATCACGGATTAAAGGAGAAGCTTCCGCCCACGGATTC TAGGCTAAGACCTGATCAGCGGCACCTGGAGAATGGAGAATACGAGAAGGCTAATATGGAGAAACAAAGGTTGGAAAAGA GGCAAAGAATGGTATGTTTTTAAAGTTCTCTCGTGTTTTGTTCAAGAAGCACGCGTCATATCTTTTCTTTTTTCTTTCTC CTTTGCATTTGGAGTTCTTGTTTTACCTGACGGTTTCAGAAATGTTGTATGTAATAAGCTATACTGTTTCTCAGTGATTG TTGGACTTAATTGTAACAATTAAAAAAGTTTTTTTTAAAAGGAACAATTAAAAAGTTAAGGACTAATTATGCTCCAAAAA TTATTGGGGTCTAAAATCACAATTGGTCAAAGCTAAGGGGACCAAAGGTGTAATTAAATTAAAAAGAAGTAGACTATTCA TGAATGGATAAATATTGTGAAGAATAGGATGGAAAGAGAGTGAGATAAAATATGAATGCTTATGAAATTCATAAAAAAAG GGGGAAATCATTTATCTTGAATTTATTTTCGGTCTGAATTCTACTATAGAGTTTCTCTAATAAGATTTTTTCCTTAAATC AACATTCTGTGTTTTTTTTTAATTTTTTTTTATTTGAGGCTCTGGATTTGTTTATTCTAAGAATATATTCATCTATTTAT AGATGGATTTTCAATATTGATACTTTGTTACACTACCTTTATAAGAAGAGAATAAAAAAAGTTAAAAGTACTAAAGGAGA TGGAAAATAATGGAGTGTATACAAATTAAAGCTCTTATGGTTTAATTGATAGCTAGAATATTTATGAAGAAAAAAAATAT TCTTTTTTCCTTTGTTGTCTACACTGTCAGCAAATTGTGACAATATCCTTGAGAAACATTTTTTACCTACATTTAGGGTA TGTTTGTATTAGAGTTGGGTGGGATATGAAAGCCCTTCATCCAATCCAACTTTGTTCCTTTGAAAAACTGTATTTTTTTT TGGAATGTGTGCTAATGTGGATTGAAAGTGTATTTAAACACATAGTAAGTATCGATCTAATTTTGTTAAACTATTCAATT CTGGTTCATTTTATACATGTATTGTTGGCCTTTATATAGGTATAATTATTAATTAGTAACTTAGTTTTTTTAAGATATTA ATTAGTAACTTAGTTTTTTTAAGATATTACCTCTTTAGCAAATACAAAATTTACTTGGTCCTAATTAATACCTATAATTT CTTTGACATGTAGTTTGGCTCCTTATTTTTTGAGCCTACCTTATTGCATAATGGTTATTTAAATGTTTGGGAGAGCTTAT CCAAATAACTTAATAGCTTATGAATAAGAGCTTATGCTTTATCTATAACATATCTTCAATTTATTTGAATAAATATTTCT AATTAACTTATGAGTGTTTACACAATAAACCTTAACTCCACAAGTTTTTAATTAAGCTGTTTTCCCGATTGCACCCTATG ATGATCATGCTTTTGTTGTAGTCAAGGAAAATGCAAGAAAATGGTTGGAAGCCTAGATGGTTTCACAGAGAAGGTGAAAA TGGAACGTTTCTATATCTTGGCGGGTATTGGGAAACAAGAGCTCAAGGAAGATGGGATGGATGCCCAGATATATTTGGTG AATATCAAGAAGGCATTGTTGATCCTTCAGATGTTTCTTGA
CDS sequence (LotjaGi4g1v0207000.11) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAACAGTCATGTCGAAAATATGATCTCTGATTTTGGTTACCCTCAGATAGCAAGGCGAAAAAAGCTTCCGGATCC TGTTGAGAAAGAGAAGGGCGTTAGTCTTTGGTCAATGATCAAGGACAATGTGGGCAAAGATCTTACACGTGTTTGTCTTC CTGTATACTTTAATGAGCCAATATCTTCCCTCCAGAAATGTTTTGAAGACTTGGAGTACTCTTATCTTCTGGATCGCGCT TATGAGTATGGAAAATCAGGAAACAGTCTTCTTCGAGCACTATACGTTGCTGCCTTTGCAGTTTCTGGATATGCATCATC TGAAGGTCGTCATTGCAAACCCTTTAATCCCTTGTTGGGGGAAACTTACGAAGCTGATTTTCCTGACAAAGGAATTCGGT TCTTTTCTGAGAAGGTTAGTCACCATCCAACTGTGGTTGCCTGCCACTGTCAAGGTAGAGGATGGAAGTTTTGGGCAGAC AGTAACATTCGCTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGAGTTCTGACCCTAGAGTTTGATGATGG AGAAATATTTCAATGGAGCAAGGTTACGACTACAATTTATAATCTTATCCTTGGCAAAATATATTGTGATCATCATGGGA ATATGGATATACGGGGTAATCGCCAATATTCAATCAGACTCAAATTCAAAGAGCAGACTATTCTTGACCGAAATCCTCAC CAGGTGCATGGATTTATTGAAGATGCAATGGGAAAAAAGGAGGCCACATTGTTTGGCAAGTGGGATGATAGCATGTATTA TGCTAGTGGTGATGTGAATGTGAAGCCAAAAGATTTCACTTCATCAGGGGCAACCTTGTTGTGGAAAAGGACTAGACCAC CCCCGAACCTCACTCGGTACAATTTGACATCATTTGCCATCACGCTGAATGAGCTCACACCGGGACTAAAGGAGAAGCTT CCGCCCACGGATTCTAGGCTAAGACCTGATCAGCGGCACCTGGAGAATGGAGAATACGAGAAGGCTAATATGGAGAAACA AAGGTTGGAAAAGAGGCAAAGAATGTCAAGGAAAATGCAAGAAAATGGTTGGAAGCCTAGATGGTTTCACAGAGAAGGTG AAAATGGAACGTTTCTATATCTTGGCGGGTATTGGGAAACAAGAGCTCAAGGAAGATGGGATGGATGCCCAGATATATTT GGTGAATATCAAGAAGGCATTGTTGATCCTTCAGATGTTTCTTGA
Protein sequence (LotjaGi4g1v0207000.11) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENSHVENMISDFGYPQIARRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRA YEYGKSGNSLLRALYVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPDKGIRFFSEKVSHHPTVVACHCQGRGWKFWAD SNIRSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQYSIRLKFKEQTILDRNPH QVHGFIEDAMGKKEATLFGKWDDSMYYASGDVNVKPKDFTSSGATLLWKRTRPPPNLTRYNLTSFAITLNELTPGLKEKL PPTDSRLRPDQRHLENGEYEKANMEKQRLEKRQRMSRKMQENGWKPRWFHREGENGTFLYLGGYWETRAQGRWDGCPDIF GEYQEGIVDPSDVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 406 | 405 | 2.1E-274 | – | |
| PANTHER | 2 | 406 | 405 | 2.1E-274 | ||
| SUPERFAMILY | 30 | 406 | 377 | 3.66E-113 | ||
| Pfam | 35 | 386 | 352 | 3.7E-122 | ||
| Gene3D | 120 | 285 | 166 | 3.3E-22 | – | |
| Coils | 332 | 361 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0207000.11, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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