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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0211600 |
| Transcript ID | LotjaGi4g1v0211600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transposon protein, putative, mutator sub-class; TAIR: AT1G06740.1 MuDR family transposase; Swiss-Prot: sp|Q5UBY2|FRS1_ARATH Protein FAR1-RELATED SEQUENCE 1; TrEMBL-Plants: tr|A0A151T9H5|A0A151T9H5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0211600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:49260456..49269025) extracted from Lotus japonicus Gifu genome v1.2.
CACATAAGTTGAATTTTTTTAAAGATACATATAATAATATTATTGGGACACATAAGCTTAGCTATTTAACTCATTTTTTG CCTTAGAACATCTCCAATGCATGGTTGCTAGTTGAGTTGCTTAAACACTATTCTGGTAGGCCTAAATTGTCACATAAGAT TTAAACAACCCAAGTAGAATTCTCTTAAATCGTTGCTTATTTTACTTTTGGTTGGGTCTCACTATACCTCATATATTTAT ATTATTTTAAGGTTATGACACTATTCAAGTTAATGAATGAAAGAAAAAATATAAAATTTCTAGTCAAAAAGCTAGATGAA AGTGAATAAGCAACCGTTGCTTAAAAGACTGCCATGTCTTGTTGCTCCAATGGTGCTCCAAAATAAGCAACGTTGCTTAA GTGCTCCAACTGGATTAAGCAACCCCATTGGAGATGTCATTTAGACAACCCAAAAATAAACCTACCAATTTTAGACCACC TTTTTGCACAAAACCTGTGAAAATAATATTGAAATAATTTCCAATACTTATCTTGGAAAGATAAATTACACCAACCAAAG ATTGATTTGGACCTCCCCTTTTCTATTCATATGTCTCACAGTTCTTACTACTTAAGCTATTATTTGGAGAAAGATTTAAT CCTTATTAAAAGAAGGAGAATCATTTTCAAAATTAAAACAATCAACAAACCCACCCAAGAAAATTAAAAAATTCTGCGGT AGGATCGAGAGTCAAAGGTAAACTCACTAGACTTGAAGCAATGACAGACATGAATTTTTTAAGTATGATGCGCGCAACTT CAATGAGACTAGAAGCCCTCCAGAAGTTTTGAAAATCATGGATCATAAAGGAGATATAGCCATCAAATTGACTTAAATAT GTTTAGGGTCCTTAAGAGCAATCAAATTGAGTCTCTAAAACAATTTTTTTTTTTTAAATGTTATTCATGTAAAATTGTTT TAATCAAATTAATTCATTTTTATCAATTTTGACTAGTCAACGGTACAAGTGACGAGCCTAGTTGGAAAAGGTGTCCACAA GAACCTTATTTTGAGAGAATAAGAGAAATACTAATTTAAGAGTAAACTACCATTTTCTCATAAGCGTATAGAGTATATCA AAGTATTTACCGGAGCAACACATGATGAAGTCAGGGAGTCAGGGACATCTCAACGGGCTATAAGTGAATGACTCAACTCG TCACAAGTCATTCATAAGAAAAGCCCAATTGCAATATCCTTCACGCGATTAAGTGCTAGGTGTGCTTTTTGTGTGTTATA AGGGTTTATATCGAGTTCATACTGTGTGTTCTCTTAGCAGCTTTGTGCCTTTGTTTTAAGCTAAGACTTGTTGTTAGTTG TGTGATCTTGAGATCTGTTTTTGCACTCTTGTTAGAGTTCAATCACTGTGGCAGTGATTGTGAGGGAGAAAGTGAGAGAG GCTCTCATACTTAGGGGATAACTAAGTAATAAGCCACGGATAGAGATATGTAGAAAGAGGCAATGAACTGGGGCAGTTTA GTTAAGACCTTTTGTGTACAATTTCTCTATAATAGTGGATTATCTTTCTCGGGTGAAAACCCTCCAGACGTAGGTGATAT TGCACCGAACTGGGTTAACAATCTCTTGTGTTGATTTTGTTATGTCTGTCCTTTAACTTGCTTATTTGCACGCTGTTTGA TGTGTAATGTTATACAAGATGTCTTGGATGGTAGAACATCTGTCCTACGATTGCCAGAATTTCATATATATTAACTTTTT TGAAATTTTAAATTATGTTATTTATATATCTATATTCTTTTTAATTTTTGAATCAAATTGGAACTCACATTAACAACAAT CCGCAACTGAAATCCCAGATCTAGAAACCATCTCATCACCATAAGGAGTCGACGCCGAACCGAATTCGAAGCTATGTTGA AGAAGATCATGAACGCCTAGAGATTCTGAAAGAGAACATGAAAGGGGAAAGCATTGGAGGACAACCACAAGAATAGATCT GGTTTCAAAAAGATACCTACATGAAACCCACGATCTAAAAACCTCCTATTTGGAACCCACGCTGCCAGCTTCGCACTTCA GAACTGCTGCCGCATCCGATGCTCAATCCTTCAAGGTTATCCTCACAAACTGTGGCGCCAAAACCTCTCGGAGAGCATCT TGACAGCGAAATGTCGATCCAGAAGTAAGGACGTCGCACGGAGTGATGAAGAAGGAAAATAGGATTGTCAGACCTGGATC TGGTTGAGGGAATGAAAAGAACAACTCGTATCTCGAATAGGATCAGAGAAGAGATATGGAGGAGAAGGAGGGAAAGGAAG GGAGGGTGGGAGAAAAGGATAAGCTTGAGCGTGGGGGTTGTTGCCGCTCTGAGGGCGGCACGACGGATACCCATGGCTTG ATTTTCAAGAGAAAGAAGGAGAATGAGAGAGGTTTTAGAGAGAGGGAGAAAGTTTTCAACCTATAAGAAAAATATTTTAT AAATAATTTAGGCTTAATCCTCAAATTAGTCCCTGTCTTTGTTTCGCCGTCTGAACCAGGTCCCTGACCGGAAAAATTTG TGGCATCAATCCCTCTTGTTCAAAAATGTTTGGAGCCAGTCCTCGCCGGAGCTCGGAGCTCCGGCGAGGGATGAAGTGGC ATGCTGACTGTGTAAATAAATGTGACGTGGCACTTAAAAAAATAAAAAAATAAAAAAATAATATAACTTAATATAATAAA CACATAATTAACCCAATTAAACTTAATCTCATCCTAAGTCTAAACCTAAACCTAAACTAACTAAACATTCCTAATTCCCC AGCCAATTTCCCAATTCCCAAATCAATCCCCAATTTCCCAATTCATCAACCGTGAAGAACCCTAGTTCTTTCTTCTTCTT CCATTTCGAGCCCTGCAATCAATCCTCTTCCTCTCGCCGATTCTTCCTCTCTCCGATTCTTCCTCTCGCTGCTTCTTCCT TATGCTGTGCTGGTGTTGTTCGTTCGAGAAGGTCACCGTTTAGGACAAGGCTCTTTGTCTTCGATTACTAAGTAAGTAGC CACATTCTCTTCTTCGAATACGAACAAGCTTGTTCGACTGGCTGTTATCTTGGAGGCTTTGGGTTTCCTTTTGGTTTTGT GTGGTTCAGGGTTTATGGTTTGTTTGGGTGGGTTTTTTCGTTTAGGGTTGCTATTTAGGGATAAATGTTTATTTGGCTTC TCTGGAGTTGCAGGATGGTGTTTACACTGATTGTTCGTCATGGTGGTTTGTTTGGGACCGCCCCTTACCTGCATTACTTT GGTGGTGGTCGAACTGAGCTTCTTGATCAAGATGAAGACATATGGTCCTACTTTGACACTGTAGCCATTGTGAAAGGGAT GGGATACAAGGAGTTTAAGTTATGGTGGGTCACTGCTGAGGATGCTGAACGACATGTCTTCAGGGATTACAAAACTGATG CTGATGCTCTTGAATTTGCTAAATATGCGAGCACACTTGGTCAAGGTTTGTTGTTTGTAGAAAATCTATCACAAGAGCAA CCTAGTGTTGGCAATGTTCCCACTATTGCCATGCTTCCCTCTGTTCCCACTGTTTCAGCACAAAACAACAAGGTACCAGC ACAAAATAACAAGGTTTCAGCACAAATGAATAAGGTCCTACCAACAAAGATGAAATGTGTGAGAAGGTCCAGTCGTATAC AAGCTGTGGTGACTAGAGCAAAATATTTGGGCAAGCCTTCCTTAGTGGTTCTCTCTGACGATGATGAGATGGAAGTTGAG CTGCCTGTGAATGTCAACACTAGTCCTGACAACAATGTTCCTCAGGTAGATGTTGCTCCTGAGAACATAAGTCCTGAAAA TGACAATGTTCCTGGTACAGAGCAGGTCCCTGAGGTAGATGTTGTTGTTGGTCCTGAGAACATAAGCCCTGACAACAATG TTCCTGAAGTTATTGATGGAGATGGGGAAAATTCTGACAGTGATGTTTCTGTGCAAAGAGAAAGGCTTCAGGATAGTGAT GAAGAAAGAGACTTAGGGCATGAAGATGTATTGGACAACACATCTTTTGCTGAGGCAGAGGCTCTTTTGAATGAGCATAT CAAACAGATGCTTAGTAGTAGAAGTGAAGAAGGTATGGGTCTAGCTTTTGGGGATGAATCAGATTCTGAAGGAGGTTATG AGAGTGAGGATCTAGAGAGTGTGCCAACTGATTCTGAGGTGGAAGATGTTCCTAGAAGAAGGTTCCCTAAGTTTGTTAAG GAAAAAATGGGCCAAGATTTCAAATTCAGCCTTGGAATGGACTTTTCATCACTACTACAGTTCAAAGATGCTCTACATGA TCACTTTGTTACTAATGGCAGAGAATTCGAATACATGAAAAATGATAGCATAAGGTGTAGGGTAAAGTGCAGAAGTAAGG GGTGTCCATTTGTCATCTTATGCAGCAAGGTTGGCAATAAAGAGACTTTCAGAATCAAAACTCTAGTTGGAGAGCACAAT TGTGCAAGAGTGTTTGATAATAAGTCAGCTACAGTGAGGTGGGTGAAGCTCAAGCTGTTGAATAAAGTGAGTACAATGAA TAAAATCAGCACAAATGAAATAGTAGATGACTTCAGAATTAACCATGGCACTGGTATAACCAGATACAGAGCATGGAAGG GTAAGCAGCTGGCAATTCAAGAGGTTGAGGGAGCCATTGAAATGCAGTATACCCTTCTATGGAGATTTAGCAATGAATTG CGGAAGAGGGCTGCAGGAAACACATGTAAAATTAATTTTGAATCACCAAGAAGCACTTTGTTTCCTAGATTCAGCAGATT TTACATGTGCTTGGATGGTTGTAAGAGAGGGTTTCTAGCTGGGTGTAGGCCATTCATTGGCTTGGATGGATGCCATCTGA AGACTAAACATAGAGGAATCTTGTTGGCTGCAGTTGCTAGAGATGCCAATGAGCAGTACTTCCCACTAGCCTTTGGTGTG GTTGAGTCTGAAACAAAAGATAGTTGGATGTGGTTTATGGAGCTATTGATGGATGACATTGACCCTGAAAGATCAAGAAG ATGGGTCTTTATCTCAGATCAACAAAAGGTAATTTTTTTTTTCTTTCTTTGTCATGCTTTTGTATAATTTGTCTAGATTT TTGTCATGCTTTTCTTGGTCACTGGTCTGCCTTAATGTAGAAATTGTCATGATTTTGCCAAATTTTATGTGATCATAGGG TTTGATGGAGGTTTTCAAAGAAGATATGCTACATGGTAGTGAACATAGACTATGTGTGAGACATCTCTATGCAAATATGA AAACTAAATTTGGAGGTGGTGTGCTTTTAAGAGATCTGATGATGGGTGCTGCCAAGGCTACATATGAAGCTGCCTGGAAA GAAAAGATGCTTCTGATAAAGGATGCCAATGAAAGTGCTTATCAGTGGTTGATGGAGAAGCCAACTTCAAGCTGGTGCAG ACATGCATTTAGCCTTTACTCAAGATGTGATGTGGTCATGAACAACCTCTCTGAGGCTTTCAATGCAGCAATTATGTTGG CTAGGGACAAGCCTATTTTAACTATGATGGAGTGGATTAGGACCTATGTAATGGGAAGGTTTCCACAGATGATGGAGAAG CTGCACAAGCATCATGGACAGATCATGCCTAGGCCATTGAAGAGGATATTACATGAGGTTGATCACATTAAGAATTGGAT CCCTAGGGTTGTTGGTGCTCAAAAGTATGAGGTTCGACATACTATCACTTTGGAGAGACATGTACTAAGCTTGAAGGATA AGAGCTGTACCTGCAGATTCTGGGAACTTAATGGCTTTCCTTGTAGACATGCTGCATCTGCACTTACTTTCAATGGCAAT GATCCTAAACAATTTGTAGATGATTGCTACAAGAGGGAAGCCTACAATGCAACATATGAAAATTATGTGACTCCATTACC TGGCCCTAACCAGTGGATTGTCACCCCTCATGATCCTGTGTGCATTCTACCACCCATGTATAAGAGAAGTGCAGGGAGGC CAAAGAAATTGCGGAGGAGAGACCCATATGAAAATGATCCTAACCCAACTAAATTACAGAGGGGGGGTGCAACTTGGAAG TGTAGTAGGTGCAAGCAATATGGGCACAACAAGAGAGGATGTAAGAACCCTGTTCCAGAAGAGCAATCTGAAATTGTACC AGAAGTTGATGAAGCTGTACCAGGTGAAACACAAGCTACAACTGCACAAGATGATGGAGTACAACCTTCAACTGCACAAG ATGATGGAGTTCAACCTACAACTGCTCAGAAGAAACCAAAGGTAATTAATTCAAACACTGCTTCAAAAAATATGAAACCT ATAATGATGGATCTTGTTTATTTCTGCAGAACAAGGGATTTAAAAAATGCAGTAGATGCAAGCAGTATGGACATTATAAA ACAAGATGCAAGAACATCCCAGAGTTAATTGTAATGCCTCAGCCCCGCTCTCTTCCTGGGATTGTTATAAGGGAGCCTGT CAATCCTAATGTCACTGCCTCACTCCCTCTTAATTCTGGAAAAATGGTATTATAATAATTCATTTTCTGGTAAAATTATG CAATGAGTAACTGGTAAAAATTATGCTAACAATTGAATTTAATTTCAGAAAGAAAAGGTAGTGGAAGATCCAAGATCTGT GGATGAAAATTGGCATAAGATCTATGCAGGGACTCATGGAGGAGCTACTACTTCATATGTCATGACTGGGAATCAGGGAG GAGCATCCACTTCTGGTTCTGTCCTTCAAGTTCAGATGGAGATTGAGACTTCCAGTACTGTTGAGAGGGTTGCAACTGAG ATTCCAGAAGCCACAAGAGACCAAGTTATTGAAGATGGAGAAACTTTACCAACACAGTGCAGTGTTGTCCTTGACACAGC AATGGGGGAATCAACTTGACCTTGCATTGGATGAAGGGAAAGCTTTTTTAGTGTATGAAAAAAGCAAGGGAATCTTTCAA ACTTTTTTAATGGTTCACATGGTTCTGAAGCAGTAGAATATGGACCACATGGCCACTATGGTCGACCCCTTACTTTTTTT GTATTATTTATGGGTGTATGTAGACCACTTACTTTGGCCACCAACTTGCTGAATTATAAGTGTTTTGATTATGTTTTAGG CTATGTTTTATCCTAGCCTTTCATCTTTGTTCAAACAATGACTAGTGGAGTAGTTTAACTCCTTATGTATTGCTGTTGAT GGTTAACCTAATTCTAATTAGATGCCTCTTTTTGCTGTGTCATTTTAATCTTATTCAATGAGCCTATTCAATGTGTATAA TGAATGAAGTTCAATGTGAACCAAAAGAAATAAATGACATCAATAGTAGCCCAACAACTATTCTTCTTTTCATTAACTTC AGGGAATCCTTGCAATAAGTACATGATAGATATACAAAATACTTCATTAGCCTACATACTTCCATACACAAGATACAGGC ATACTCCATACTTCCTTAGCCTACATACTCCATACTACCATCCCTCAACTAAACTTTTCAACCCTTTCTAATACATAAAC TCCACACTGCTACCATCATTGCAAGGACAGTGAACAAGCATGCAATCTTCTTCTGGAATCTCTCAACTTCAAGCTTCTTC TTGAGTTTGTTAATCTTTTTATTCAAATCAGGAAGAACATGCACAGAGGTGACAGGACCATTACCAATCTCAGAATTTAA ACTCATTGCATCACTTTCAACTTGAGCATGCCTTCCCTGAGCTGCATTTCTTCCCATAAGTGGTTCATCAATCCAGAAAA AGAAACCACAAGAATCTGGAAACTGCAGCAGATATTGCAATTGGGTTACAAGATGAATACCATGAGATTAAAAAGCCTCA ATTAAATACATTCATTCACTTACTTGCCATCTTCTGCACCTCAAAAATCTCCTATCTGGGTTTTCTCGAGTACCAGCTGT GTAGATGATGAGAGTGAGACCACATTGACACCTGGCCTTTCCACTTGCAGACATTGTCCTGGAACGGGAGGACGAAGCGG ATGAAGAATTCATTCTTCAAGGCTCAAGACAACAGGAACGCACGCGATTCAGGGAGAAGAGAAGAGGAACTGGTGTGAAG AGGAAGTAGGAGAAGAGAAGAGGAACTGGTGTGAAGAGGAAGTAGGAGAAGAGAAGAGGAGAACGCGTGCGGATGGGTAT GAACCCGATTCAGGAAATGGGGAATTGGGGAAATGGGTATGAACCCTAATTTCATTCACTTTCTGATGAATTGAGGAATT GGGAAATTGGGGGTGGCTGGGGAATTAGGAATGTTTAGTTAGTTTAGGTTTAGGTTTAGACTTAGGATGAGATTAAGTTT AATTGGGTTAATTATGTGTTTATTATATTAAGTTATATTATTTTTTTATTTTTTTATTTTTTTAAGTGCCACGTCACATT TATTTACACAGTCAGCATGCCACTTCATCCCTCGCCGGAGCTCCGAGCTCCGGCGAGGACTGGCTCCAAACATTTTTGAA CAAGAGGGATTGATGCCACAAATTTTTCCGGTCAGGGACCTGGTTCAGACGGCGAAACAAAGACAGGGACTAATTTGAGG ATTAAGCCAA
CDS sequence (LotjaGi4g1v0211600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGTTTTCAAAGAAGATATGCTACATGGTAGTGAACATAGACTATGTGTGAGACATCTCTATGCAAATATGAAAAC TAAATTTGGAGGTGGTGTGCTTTTAAGAGATCTGATGATGGGTGCTGCCAAGGCTACATATGAAGCTGCCTGGAAAGAAA AGATGCTTCTGATAAAGGATGCCAATGAAAGTGCTTATCAGTGGTTGATGGAGAAGCCAACTTCAAGCTGGTGCAGACAT GCATTTAGCCTTTACTCAAGATGTGATGTGGTCATGAACAACCTCTCTGAGGCTTTCAATGCAGCAATTATGTTGGCTAG GGACAAGCCTATTTTAACTATGATGGAGTGGATTAGGACCTATGTAATGGGAAGGTTTCCACAGATGATGGAGAAGCTGC ACAAGCATCATGGACAGATCATGCCTAGGCCATTGAAGAGGATATTACATGAGGTTGATCACATTAAGAATTGGATCCCT AGGGTTGTTGGTGCTCAAAAGTATGAGGTTCGACATACTATCACTTTGGAGAGACATGTACTAAGCTTGAAGGATAAGAG CTGTACCTGCAGATTCTGGGAACTTAATGGCTTTCCTTGTAGACATGCTGCATCTGCACTTACTTTCAATGGCAATGATC CTAAACAATTTGTAGATGATTGCTACAAGAGGGAAGCCTACAATGCAACATATGAAAATTATGTGACTCCATTACCTGGC CCTAACCAGTGGATTGTCACCCCTCATGATCCTGTGTGCATTCTACCACCCATGTATAAGAGAAGTGCAGGGAGGCCAAA GAAATTGCGGAGGAGAGACCCATATGAAAATGATCCTAACCCAACTAAATTACAGAGGGGGGGTGCAACTTGGAAGTGTA GTAGGTGCAAGCAATATGGGCACAACAAGAGAGGATGTAAGAACCCTGTTCCAGAAGAGCAATCTGAAATTGTACCAGAA GTTGATGAAGCTGTACCAGGTGAAACACAAGCTACAACTGCACAAGATGATGGAGTACAACCTTCAACTGCACAAGATGA TGGAGTTCAACCTACAACTGCTCAGAAGAAACCAAAGAACAAGGGATTTAAAAAATGCAGTAGATGCAAGCAGTATGGAC ATTATAAAACAAGATGCAAGAACATCCCAGAGTTAATTGTAATGCCTCAGCCCCGCTCTCTTCCTGGGATTGTTATAAGG GAGCCTGTCAATCCTAATGTCACTGCCTCACTCCCTCTTAATTCTGGAAAAATGGTATTATAA
Protein sequence (LotjaGi4g1v0211600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVFKEDMLHGSEHRLCVRHLYANMKTKFGGGVLLRDLMMGAAKATYEAAWKEKMLLIKDANESAYQWLMEKPTSSWCRH AFSLYSRCDVVMNNLSEAFNAAIMLARDKPILTMMEWIRTYVMGRFPQMMEKLHKHHGQIMPRPLKRILHEVDHIKNWIP RVVGAQKYEVRHTITLERHVLSLKDKSCTCRFWELNGFPCRHAASALTFNGNDPKQFVDDCYKREAYNATYENYVTPLPG PNQWIVTPHDPVCILPPMYKRSAGRPKKLRRRDPYENDPNPTKLQRGGATWKCSRCKQYGHNKRGCKNPVPEEQSEIVPE VDEAVPGETQATTAQDDGVQPSTAQDDGVQPTTAQKKPKNKGFKKCSRCKQYGHYKTRCKNIPELIVMPQPRSLPGIVIR EPVNPNVTASLPLNSGKMVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 48 | 307 | 260 | 1.0E-53 | – | |
| PANTHER | 48 | 307 | 260 | 1.0E-53 | – | |
| ProSiteProfiles | 168 | 211 | 44 | 10.126 | ||
| Pfam | 177 | 207 | 31 | 6.0E-9 | ||
| SMART | 186 | 213 | 28 | 1.1E-8 | ||
| MobiDBLite | 263 | 287 | 25 | - | – | |
| SMART | 292 | 308 | 17 | 0.21 | ||
| MobiDBLite | 300 | 363 | 64 | - | – | |
| MobiDBLite | 328 | 357 | 30 | - | – | |
| SUPERFAMILY | 352 | 384 | 33 | 4.97E-5 | ||
| SMART | 365 | 381 | 17 | 0.093 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi4g1v0211600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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