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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0213900 |
| Transcript ID | LotjaGi4g1v0213900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF1442 family protein; TAIR: AT2G45360.1 ankyrin repeat/KH domain protein (DUF1442); Swiss-Prot: sp|Q3KDW2|XYLG_PSEPF Xylose import ATP-binding protein XylG; TrEMBL-Plants: tr|A0A0R4J5Q0|A0A0R4J5Q0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0213900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:49716697..49722463) extracted from Lotus japonicus Gifu genome v1.2.
AAATAAAATGAACTGTTTTTTTACTTTGTAAAATTTGTAAAGTTTGATTCTACAATTTCCCTTACTTGTTTTTTTACCAT TTGTCCTCCTATTAATACGAAAACAAGTAACAACAATATATGACATTGACAAGTATGATAGAGAAGAGAAAATCAGTTTA GCGTGACAGCATAGTTAACCTTTACATACAGACAAGATCACAATCACTATTCAAGAGAAACCGGAGTTATCCGAAGCTAC CAACACGTTGGAATGCCGCGGCTAAGGAATAAATGTCAACGGTCCTACATGCTCTGCTTCTATCTCTCTCTCTAGAACCT CCTCAGCTCCTAGTCATCCTTGTTCTTCTCTCTTCCGCGTTCTCATGCTCCTATATAATCAATATTAAACCCTCGTGATT CAATCTCAAACATTCACAATCACACTAAATATCACACCTCAATTTCCATACATACCCCAAAACCAAAACCATCATCATCA TCAAATATCAATCATCCGAGGAAGAGGAAAATGAAGCTAGTTTGGTCCCCGGAGGCAGCATCAAAAGCATACATCGACAC AGTCCAATCTGTAAGCATTCAAAAATCATCACACCTTGTTTGTCATGTTCATATCATTCTTTCCATTTTCCATCCATGTC TCTCTCTAACCTTGTTCAATTCATTTTGTTGACCAGTGCCCTGAATCAGGGGTGGCAGAGCTTGTTTCCGCCATGGCGGC AGGGTGGAAAGCGCAGCTCATCGTGGAGACATGGTCAGAGGGAGGACCGATCGCCACGAGCAGAGGGTTGGGGATAGCAA GAGGGCACACGAGCGGGAGGCACGTCTGCGTGGTCCCTGACGAGAGATCAAAGGTGGAATATTGTGACAGGATGGGGGAG GCAGGGGTGTGCACGGAGGTGATGGTGGGGGAAGCGGAGGAGGTGATGGAAGGTTTGGTTGGGATTGATTTCATGGTGGT GGATTGTAAAGGGAGGGAGTTTTCCAAGATTCTGAGGGTGGCTAAGCTTAGCAGCATGGGGGCTGTGTTGGTTTGTAAGA ATGCGAATTCTAGAAATGTTACAGGGTTTAAATGGCGGAGCGTGGTTGATGGAGGTTCTTCGCGGCGGCGGCTTGTTCAT TCTGTGTTTCTTCCGGTGGGGAAAGGGCTTGACATAGCACATGTTTCTGCTGTTGGAGGTGGTGATTCTGTTTCTGGGAT CAAGGGTAAGAGATGGATCAAGCATGTTGATCGACAATCAGGGGATGTGCATGTGATTCGGCGATGAATGAACATGTTTG ATGCAAGCAGTTGTTTTTTTTTCTTCTTCTTTCTTTGCTGGTATTCTATTAGCTGCAAAGATTGTAACAGATTTTATTTA ACTTCTTCATTTTTGTAACATGTTTTGCCAAAATACACTGATTAGTTGTAATTAAATACAATGATGCAGTGTGTATGTGG TATCTCACAAACCATTCCATTTATTCTTTACTGTTATGAGACTCTGGTAGTCCTTTTTTATTTCCATCTGTGATGACTTT TGCGTCTGGGACAGAATTTCTTTCTTTCTTTTGTTTTGTCATAAGAAGATTACTTGCCACTTGCCAGCTGGGATTTTGGG AAGCTGAAAGGCAAATAGGAAGAGGGGGAAGTGGACAGGCTAATATCGGAGTAGAATATTCTCATATCACATGACAGAGT CATGTGATATATTGCATATATCTCTTTATTCATAGATATTCAAAGAATTCCCTAGTTAAACATATAAGGAGATATATAAT ATAAACACAATTTCAACACGAGGCATGATCTAGCATATGTTTTGACGATGGATATCTCTCGAGCTGTTATTGGGAGCAAC TTTTGGAAGCCATTCGTTTAGTTTCCTTTGAAGATGATCCGTCTCACTCTTTTGCTGACATGATTGAGCACATTCAGTGT AGAATCTCAACGCATAGAGGTATTGTTTTGGCGTTACTTTCGGGGAGAGTAACTTGTTGCGAACTGGCTTGCCAGTGCTT CCTTAGCTTTTCGTTTTGGGTCCATTGTTTTACATCCCCTTTTGGTGAGTATCATCATGTTCTTAGGCAAGATGTTAGCG AAGGCATGACCTCGGTGTCTGTTGTTTCTGCATTTTAGCCTTGTTTTTTGGGGGCTTAGCCCCAACCTTTAAACAGAACA ATAAATATCATATTGAGCTAGTTACCAGATAGTGAAAGTTAGTTTACAGTATCACTCAGAATTAGTCCAAAGTAATAAGC AATGGAGAGTAATGAGTACTGATTTTAAAATCTTTAACAAATTGGGGTGCATAGATGGCCTTGTTCTAACATGGAAACGT ATAGGGAACAGACTTCCCAACTACCAAAATGACAAAATTCCGTCCCAGCAACCGAATTGTGTATCAAACATACTTCTGAC TTGAAGCATGGTCCCCAGGTTGCTGACCTTCAATAATGCAGAAGACCCATAATTGCCAAATCACATGGGAGAGCTTAAGA TAACAAATTAAACATAACAGATTCAACTCAAATATGGTATTTCTTTTTATATCAATAATCCTGTTGCATGAAATCATAGC TGCATCACAATTTTGACTAACTACCAATATATGTGCAGCCACAAGTTGCATGAGATCCTTCTAGTAGGCTGGCAGAATGT TGCGTTATGTTGCTCAAACTCTTGGTTATTTTCAATCATTCATCTAATGTGTTTGTACTGAATAGTGGCAGTATCAGAGG ATTGTGCATTTGTGCCCTGCAACCCCAAGATTCAGGAGCAACATCAATTGAGAATAGGCACAATAAAACTGATAATAGCC GGTTTAATAAAAAAAAACTCAAGTTGCCAATAATGGTGAACTTACTAAAGGGATAAACTGTTTCAAGATTCTGGAATACA ATGTATTAGTCCCAACTACTTTTACTTCTTCTAAACGCTTTCTTATCTGAAAGCACCTTCTTGCTTTTAAGGCGTTTCTG CTCTCCTATGGCAGCCCTTCAAAAGTACACATTCAATTAACAGTTGTCAGTTTCAATGTTACATGCCCTTCACACTCAAG TGACTCAATGTAATAAAAGCCACAAGCAAAATGGTGTCCAAAATGAGATTGCATTTTTAACCTGAAGAAATTAAAAAATA AAAAGAGAAGTGCTCTTACATCTTGGCAATTTTCTTCTTTTGTTCTTCTGATGGAGGAGGTGGGACATAAGATGCAGCAT CAATGATTTCCTATTTTTCCCATTAAATAAACAGAAAAGCAACATTGTCGAGTAAAAGTCATTTTTCAGGAACAAGAACA TCGTATCCAAGATGACACTAACCAGGAGGGGTGCTGAATAATCATATTTTTAAGGAAATAATCGGAATGCTTATAAGATA TACTCATATTATATTTTGTATACACCACACCTCATTTTTGTTCTCACTAATATTTGCAGGGTCAAGACAAGTACACTATG GACTCCGCTATAACAAAGACATGGCAATCAAGCAACTCAACAATAAAGGAATAGACAGCCAATGAACAGTAACAAACAAG GAGCCAATTTACAAAGTACTTCTCCAAGAAATATTCCATTTCTTACTTATTCAGTATGTTATTATAACTCCTCAGACAAT CAAAAAGATAGTCAGCGTTAGAACTTGACTTACCTTCATCTAATACACAAGAACCCAGAAAATAAGGAGTAGGATATGTC TACCACCAAGTCAATATCCTAAGCTCCATTCTTCCCCTAGTTTCTTTACTATCAAGATAAGGGAGTATTTACAAACACAG CATTTTCAACAAACAAACTTCTACAAACCCCATTAACACCAGAGAAGAATAGGAAGTAATAGAATCCAGAGCTACAAAAA GTAAAATCCAGACTTATATAGCTGATATGAGTCCACAGAAACTGTCTTGCACACTGGAAAATTCCATTTCAAGAAGCTAA TACATCATTATTATTTATAGAATTAAGTCCCTGGTGGGAGAAGACTTGAGAGCTATAGAAACATAATCATTTCAGAATCT ACCAAGTAATGATAACCGTCATAAAAAACCATTTTTGGGCTTCCACTGAAGAATTTTAGATTTGAGGAGATATGTTCTTC AATAATAACATCTGATGCTAAAGCATACTTTTAAACAAGTTAACAAAAGAAAGAAATTTTATATACCTGAAGCTTTGCCA AAGCATCATCGATATTACCCCTGAAGAAAAACTGGTAGAATAAGGATCAATCTTACAACATACAGGAAAACAGACAACAA ATACGACAGAAGCGAAGAGGCAAACTTCTGTGTTCTAGTTTTGGTTGAAGAAATCACAAGCTCCCCATCCTTGTTGATAC GGTTTTTCTCCTGCTCAGGAATTCAAGAATATTAAAAGATAAGGTAGATATCGGTGAATAATGAGCATATAGCAATAAGA TGTGGCTTCACATAAATAATGCCAACCATACAAGGGCCTATAGAGACAGTTGAATAAACCAATTGTCCCAAAAACAAACT TAAATTGTTAGGTTTAAGTACATGGATAATTTTGCATCTGACAGCCCCTCAAGCAATAGTCAATCGGGTTTGAAGCGTGG ACTATGCCCAAGTTCACCAAACACTGTACTGAAATTTAACTTCTACTTAAAAGAATAGGATCAAATTCTAAACCACTTAA CTACATAGCTTTTAATATCATGTCATGAACCAACTATTTCAAAAAGCTAAGCAATTAGGTGACAGTATACATAAATGGTT TCACTTTCACATCTAACAAATAAGCAGTAAATCATATGATTTTATAAGGACGAGAAAAGAAAAGTTGCGACGAACTAACC GTTTGAATAATCTTGTCCCTGATCCTCTCACTAAGCCAATATGCATTTTTAACATTGAAGCGCATGTCCACCTTGGTATT CACTGTCCAACAACAGGCATAACAATACAAACAGTATTATACTAGTTAGCCCCAGCCAGCATCTAAAATAGAAACAAATA AAAAGAATAACCTTTGATTTCCACAAAAACAAGTTAAAAAAAAATTAAAACCAACCTTTATTCACATTCTGACCCCCAGG TCCTCCGCTTCTGGCAAAGCTCACAGTAACATGATCTGAAACCAAATTTCAAACAAAAGGGTCATTTAATTTTCCTTTTT TGTTCCTCAAAATGATGAAATTGATGAAGAAATGACACACCTAAGGTGATTTTAGGAATAGGCCCAGTATCAGCAGAGAG AGCTCGTTGTTCAGCTTCATGGAGGAGATGCTGAACCTGCGATAACCGAGACGACACTTTGTTGCCAGAATCCGAATTTG AAGAAGCGCATCGAATTGCAGGGAAGCGAGAGTGGCGTGATTGAAGAAGTGATGTATTCCTGTATGGAGAGAAGGGGAGA GCACGAGAAAGCACAGAACCGACACGAAGCGAAGAAAATGGAAGTGTGAAAGAGAGGTGCAACATTTCATTCAGCACCAT TCTACTGGTGGCTGAAGCCATAGCATTCATCAAGGTATGAACCTCGTCCACAATACCCAACCCTGTCCCTTTTGTTTTGT TTTGGCCTTCGTTCTCCGGTTGATTTTCGATTCCTATTTCGTCATTGGATTTTTTTAGGTTAATTTTTTTTATTTTACAC TCTCACCAAATAAGATTTTAAAGACGTGTGCCTTAATCAATCAAATTAAATAATTTTTTTTTCATTTTTAAAATCTAATT GGTTTTTTTTAACATCTACCGCTATCTGCTATGAGTTTCCTATTTCTCTCATCATCGCTGTCATTCATCAACATAATTTG TTTCCAC
CDS sequence (LotjaGi4g1v0213900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTAGTTTGGTCCCCGGAGGCAGCATCAAAAGCATACATCGACACAGTCCAATCTTGCCCTGAATCAGGGGTGGC AGAGCTTGTTTCCGCCATGGCGGCAGGGTGGAAAGCGCAGCTCATCGTGGAGACATGGTCAGAGGGAGGACCGATCGCCA CGAGCAGAGGGTTGGGGATAGCAAGAGGGCACACGAGCGGGAGGCACGTCTGCGTGGTCCCTGACGAGAGATCAAAGGTG GAATATTGTGACAGGATGGGGGAGGCAGGGGTGTGCACGGAGGTGATGGTGGGGGAAGCGGAGGAGGTGATGGAAGGTTT GGTTGGGATTGATTTCATGGTGGTGGATTGTAAAGGGAGGGAGTTTTCCAAGATTCTGAGGGTGGCTAAGCTTAGCAGCA TGGGGGCTGTGTTGGTTTGTAAGAATGCGAATTCTAGAAATGTTACAGGGTTTAAATGGCGGAGCGTGGTTGATGGAGGT TCTTCGCGGCGGCGGCTTGTTCATTCTGTGTTTCTTCCGGTGGGGAAAGGGCTTGACATAGCACATGTTTCTGCTGTTGG AGGTGGTGATTCTGTTTCTGGGATCAAGGGTAAGAGATGGATCAAGCATGTTGATCGACAATCAGGGGATGTGCATGTGA TTCGGCGATGA
Protein sequence (LotjaGi4g1v0213900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLVWSPEAASKAYIDTVQSCPESGVAELVSAMAAGWKAQLIVETWSEGGPIATSRGLGIARGHTSGRHVCVVPDERSKV EYCDRMGEAGVCTEVMVGEAEEVMEGLVGIDFMVVDCKGREFSKILRVAKLSSMGAVLVCKNANSRNVTGFKWRSVVDGG SSRRRLVHSVFLPVGKGLDIAHVSAVGGGDSVSGIKGKRWIKHVDRQSGDVHVIRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 216 | 216 | 4.2E-100 | – | |
| Pfam | 1 | 216 | 216 | 1.0E-85 | ||
| PANTHER | 1 | 216 | 216 | 4.2E-100 | ||
| Gene3D | 7 | 182 | 176 | 6.8E-8 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0213900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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