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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0216600 |
| Transcript ID | LotjaGi4g1v0216600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Copper ion-binding protein, putative; TAIR: AT4G12340.1 copper ion binding protein; Swiss-Prot: sp|Q9NX63|MIC19_HUMAN MICOS complex subunit MIC19; TrEMBL-Plants: tr|I3SP75|I3SP75_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0216600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:50945905..50951491) extracted from Lotus japonicus Gifu genome v1.2.
AGTTCTTAGCACTATTCATCCAGTCCCACAATACCATTATATTAATATTTTTTATTTTCATATAATTTTGATTTAAATTT AAATGTTAATTCAATACTTAAATTAAATGAATGAGAGAGAAAAAATTAATTTTCTATGCTAAGAACTCAGGTTTCATTTA GTGTACACAAGAAAATTCTTGTGTAAGGTTACACAACTCTCACTTTTACCTACCATGATAGGTTTACAGGTCATTTATAT ATTTTTTCATTTAAAATTATTTATTTATTGTCTCCTCCTCTCCACCACCTTCCTCCGTCAACCTCCACCGTCCGCCGCCG GCACCACCACCATATTTTCTCCAGATTCATCGAATCCTTCTTTCAGACCTTCCTTTCTTCAAACTCACCAGAAACCTTGC TTCCTTCAAACTCACCAGAAACCTTCCTTCAAACCACCAAATCTGAACCAGATCCAAAAGGAGCGTTGCAGAGAGAATAA TTGGAATGGATCACCGAGACAGAGTGGTAAAAGGTAACTGAGAATTGAATTGTTGAATGAGGGGAATTTTGGAGGGGAAT TGTTTGATTCAAGTTCTTTTTGTTTCCTCTCAGTACAAAAGATCCTTCTTCTCACCGCCACAGTAGCCCTCTTTGCCGAA GCCAGCGCGTGGCCATCTCTTCCGCTGTTCAAGGTTCCGACGACCATCTCTGCTGCCGAGTTCCCCGTGGCCATCGTGTT ACCACCGCACCCTGTCATCGCCCCTTTCCTCCATCGCCAGCGAAGTCGCAACCTTCTCTCTCAAATCAGGTTGTTTTCTC TCTCAGATCTGCTCTGTTCAGATTGATTCCAAGCTTTGGTTGTTGTTGTTTCAGCGTTGAATCCTCTCTGTCTGTTTGTG TGAAAATAAGGGGAAAGAAAGGGGAAGAAGTGGATTTCAAGCATGAAATAAATCCGGTGGCGAGGGAAGGGAGTAGAAGA TCCGGTGGCGGTGAAGGGATGGGTCGTGAGGGGAGGAAGGTGGTGGAGAAGGGAGGAAATAAATATATATTTTTAGAATT AAAAAGAGTGACCTGATGAGTAACCTGTAATAACAGGTAAAATTAGGGTTGTGCAACTTTGCACAAGGAAAAAGTTGTGT ACAGTAAATGAACCTAAGAACTCAAGAAGTAAAACTTTATATAAGAACCTAGTTTTTATTTTTAAGAACTAAGAACTTCA CGTCATCCCTCTAGTGGTTAAGAATTCAGTTCTTAATTTTTAACTCAAAAATAAGAACTAAGAACCTTACATTGGATATG CTCTAAATCATCATATTATTTATAGGAAATACTTAATTTGAAAAGTTAATAAAAACAACTGAATAAATAGTGTGATGAGA TACTTTATCACCTAAGAGGAACCGAACCCAAATTAAACCTGAACCTCTCATCTAATAAGGATACCACGATCTCCAAACAG TGTATTTGCAAATAGCTTTTAGTCTGGTTAGATTTAAAGTTATAGTATATTACATGTTTGAAAATATAAAATAGAATATG AGCTTTATTTTCCAAGTGTTCAGTCCATAAAAAATGAGAAGACTTGGCAAAGCAAATCATACAAGATGATTAGATGAAGG GGCATTAAATTTCTCACCTGATCAACCAATTTCCCACCCCCACTTTAAAGTGGGGATTGTCTATAATGCCCCCGCTTTTA ATACATTCTGGGATTTATAATCCATAACTCATATTGAGTAGCATTTCAGAATTTAAATCCAGGAACCTTCTAGGATTTAT TTTCCGTTATTTCCCGGAAGGTTCCAAGATTTAAATCATGGAAGGTTCCAGGAATTTAAAACCCGAAGTGTTACGCAATA TGACTTCCAACGGTGTAAATAAGCCTATTTTTGTGTTTCTGGATTTTATTTCCGGAAGTTTTATGGAAATAGATCCCGCA AGCTTCCGAGAAATAAATCTCGGAACTAAAATTCAACATTCAACTTTTTTGTGTTCCAAAAAAATGAATTATATTTTGGG GTTAGTTGGGATGAGAAATTTAATGGGTGGAGTGGGAAATTTAAGACCCTCAGATGAAGCCCAAATAGGTTAGAAGTCTA AGGCCCATAATATCAACTCGAACTCAGCCATGTTGGCCCAAAAAAAAAACCAGCCATGTTGGTTACCAAAAAGAAAAACA AAAGCTACTCTGAATTCTACTTCTAAGGTCTCTTCTTTCAGTACCGAGTTTCCATCTCTGTGCCGTGCGATAACATCGCG AAATCAAAAATCGTCGTCGGTATCGTGCGATTCGGTAAGCTTGTTCTTCATTCATGTTCAATTGCGTTCAAACCTGAATT TTATTCTGAAATCACTTCAATTGTATTCGGATTTTGAGACCAATTTCTAGGTTTAACTCATTCATCTTTTGATTATGCAT GCTCTAATTCTGTATCAGCCTGAGAAATCATGTTGTTGTTGAGGCTGTATACATCAATTTCATCTTGTATTGGTTAACTA TAAGAATTTTCAGTCCAGTGAGAGAGAATAGATTTGGTGTTTGACACTTGGTTTTGGGGAAGAAAACCACTATGTAGATG GGATTTAATGTGAAATATTATCCTCCTGTTATGTAGACCTTGAAAAATTGGATATAACTCATGTTACACATGTAACTGTA TATCACTAGAGCTTGCTACTGAATGTTGACAATATCATGATTTACTTAGATAATTTTTTTCTCTTTTGGAGAACTTCTTT TGAAAACTTGTGGGATAGTTCACTGTGTTTTGTGGTAGATGATGAAGCTTAAGCGCGCGTTAAGCGACCGGGATTTTTTC GTAACTGTGACAGCTAGTAGTCTAGTACTCATTGCTGTCATTCTGAAGTCTGACTGCATAATACATAATTAGGTGTTGGG AATAAAGGGCTCATGCATGTCTAGTGAGGATTAAGTTTGATGTGTAGAGTCTGTTCTGTTCGGGCAACCATTAGAAGTAT TATTGTTGAAAGATGAATCTTTTCCCCCACATACATTTTTTCCCCATTTGTACGTTAGAGTACGGGGTTATGGGCATCAA TCAGGGATTCAGGGGGTTTATGCACTAACACCTTAATTTTAGACAGATTCCAAAATGTACATTTTGCTCATTTAAGAATT TTGCCAATAGGTTGACATCATGGGGCAACATCACCATGACAGATATCACATCCTTTTTTCTTCCATCCTTAGCCACTTAA TGTTTCATTAATCATCCTACCTACAATATACATAAAATTGAGCTTATATCTTGATAGGGGCTTTATGTGGAATTTGATAA TTTCTTTGCATATTTCTAGCTTTTCTTTATGTTAGATATCCCAATTTTGTTCTATTTCTCTTATTTATGATATGCTTCAT TGTTTAATTTTTGAGTTGTGTCAATATAGACTTGGTTTCAAGGTGAACCTTTTTATATGACTAGATATGTAATATTTAAA ACAATTCTTTTAACTGCCCTGCATCAATCTTTGTGTAACATTATCATTTTGATGATATCATTCTGGTAAATTGTGCAGGA GTTGACATATTATGGGTGAATTCACAATTCAGATTAGCAATGAACTTGTTAATCAACTTGTTGATGATCCGGTGCCAAAG AAGAAAATTAGAAGGAATCGACGTAAGGTGGCAAAAGAGACTGAAAAGCCTCAATCTAATGTAACTGGAAAGCCCGAGAA TGCAGCTGCTCCTGGGTGGCCAGTGCAGTCCCCTTTGTTTCTACCTGCAAAACCGCCTGTACAACCTGCTGATCCAGAGA TAGACGGCATTCGATCCGTGCTTCGGGAAAGTGAGAAGGTTTTGGAAAGTTTGCAGAAGCAGGAGGAGAACATGTTGCAG GAAGTAACCCAAAAGGCAAAGGATCTCCATGACAGAGAATATAAGCTTCCAAACCCAAAGCCTGAGCCTTGCATCGCTGA GAGACTTGCTACGTTATCATGTTACAAGGAACATATCAAGGACCCGTTGAAGTGTTCTGCTTTTGTTACCAATTTTGCCG GTTGCTTGCGCAAGTTTGGCCGTTCACGGGACAAGTAATTTAGAAGGAAATTTGACTGAACGATATGCAAATAAACTAGT AAACTACATACTGACAAATATTTTGTGTTGGTTGCGGCCAGTTTTGTTTAATGTTTCATTCTCAAATCTCGGCATTGAAC TATGTTTTTAGATTCAGAGTAAGTGGCATTCTCTGACTACATAGTTATTTTGGTTCCTGAAAGATATATGATCGGTCATT TTAGGTTTTAAAAGATGGAAATTATTATTTTCAATTTTGGCAGATGTTCAATTTCGTCGTTAAAAAATGGAAAAATTGAT AAGTTCCTCAAGGGAGCCTTTAATATACACCTGAAAAAAACTAGTGTAATTTTATACTAGCAATTTCTGTCCAGTGCCGT TACATTCTGTTAGTTCTTATTTTTCATATTAATAATTCCCATTTAATTCATTTTGAAGTAAATAACAGTTTTACCCCAAC TAAATTTAGATGGAAAAAAAAAGTAAAAAAAAAAAAGAAAATGATAGAAAAGCCTGTGCAACTCGACGCCGACGCCTACC ATCACCACGCGCAGTTTCTCACTGCAGCCCTACAATACCTTGGCGGCAAACCAACTCGACGCCGACCAACACCACCACCA TGTCACTAACTTTGTAAGCCAACCAACACCACCACCATAGGATAAACAAATACAAATCCAGAAAAATCATGAACGACAGA ACTACTTGATTGAAGACCCACCCCATAAAAAATCCGTCAATTTGTGATTGGATGGTTTATTTGGCTTCTTTGTACGCCCG TTGCTGCTGTGGGGTGCGTGGATGGCTGATGATGCTACTAGCTTGGGGGATTGTGGACTGCTGATTGGAGAGATGGCGAG TTTTCTACTCGTGAGGGACATTGATGCGTGTTTCATCTCACACTCTGGATGTTTCCTCTGCCTATGCCTTTTCCCTCTTT GCTGTCATTGTTTTTTCTTTGATTTGGGGCTCTGTTTTTGCCTGGTCTCTTGGTGCTTTTTTCTTATGTTCCCTTCTTCA CTTTTGCTTTAAAATTGGATAATTTTTAGGAAATAAAAGCTTGATCTTCGTCGCTGGTGAGGACAAGTGTAGAATTCTCC TTTCTTATATATGATTGTTATTCTTGAGATGCTTTTTTTTTTGTAAGCAAAATTGAATTAATAGAAATACTATACTAAGC TTCACAAGCCACCAACAATCAATTCCTCATAAACCACCAAACCAGTGTTGACAAAAAGCTCAGCGTAAAGTTAGTGCATT CAAGCAAAGGAATGATTTGTGTATCTCTATCATTTCATTTGCGAATAAACAAATAAGATGGGTTGTTGACAATCTTCATT GAAAGATGGAGGATGAGAGACTCACCCAGAAAAGGAGAAGGAACAACTCTACCACCGCAATCTCAATCTCTCCCACTCCC AAACATGACAGGTTCTTGACGGACAAATTCCACTGCTCGTAGGGCTCGAAATCAAAGGGGGAATTGAGCAATTGAACAAC CAGATGGGAAACGGGTTCTGAGATTGAATTCAAAAACACGATTAAACGGGAATGGAATCCTTTTTAA
CDS sequence (LotjaGi4g1v0216600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGAATTCACAATTCAGATTAGCAATGAACTTGTTAATCAACTTGTTGATGATCCGGTGCCAAAGAAGAAAATTAG AAGGAATCGACGTAAGGTGGCAAAAGAGACTGAAAAGCCTCAATCTAATGTAACTGGAAAGCCCGAGAATGCAGCTGCTC CTGGGTGGCCAGTGCAGTCCCCTTTGTTTCTACCTGCAAAACCGCCTGTACAACCTGCTGATCCAGAGATAGACGGCATT CGATCCGTGCTTCGGGAAAGTGAGAAGGTTTTGGAAAGTTTGCAGAAGCAGGAGGAGAACATGTTGCAGGAAGTAACCCA AAAGGCAAAGGATCTCCATGACAGAGAATATAAGCTTCCAAACCCAAAGCCTGAGCCTTGCATCGCTGAGAGACTTGCTA CGTTATCATGTTACAAGGAACATATCAAGGACCCGTTGAAGTGTTCTGCTTTTGTTACCAATTTTGCCGGTTGCTTGCGC AAGTTTGGCCGTTCACGGGACAAGTAA
Protein sequence (LotjaGi4g1v0216600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGEFTIQISNELVNQLVDDPVPKKKIRRNRRKVAKETEKPQSNVTGKPENAAAPGWPVQSPLFLPAKPPVQPADPEIDGI RSVLRESEKVLESLQKQEENMLQEVTQKAKDLHDREYKLPNPKPEPCIAERLATLSCYKEHIKDPLKCSAFVTNFAGCLR KFGRSRDK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 165 | 165 | 5.9E-64 | – | |
| MobiDBLite | 22 | 76 | 55 | - | – | |
| Coils | 77 | 115 | 39 | - | – | |
| SUPERFAMILY | 123 | 164 | 42 | 3.01E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0216600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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