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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0229900 |
| Transcript ID | LotjaGi4g1v0229900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosylmethionine-dependent methyltransferase, putative; TAIR: AT5G63100.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q8G4L4|SPEE_BIFLO Probable polyamine aminopropyl transferase; TrEMBL-Plants: tr|I1MTD9|I1MTD9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0229900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:53997264..53998756) extracted from Lotus japonicus Gifu genome v1.2.
GTCAATTTATCAAAATCATTACCTTACCCATTAGAGGCTCCCCTAGTCAAATTCCACAAAGCTAGGCATGTATGATGTAT CCAATGATTTTGAAGAACTTTTCTTCCATGGCTTTTCTACATATTTTCTCTTCATATTTTTTTTTCTTTCATATTACACA TCACATATTTCAATTCTATGTTTTTTTTTTCTTATATTGGATTAGATGTCAGTCACACTGTGCACACATTTCCCCCCCTT CCAAAACCTATATAAAAACAACACGACACAGCAATCTTCTCTAGTGCAGCCAGAAATCAAAACATAGAATGTGGACGATG CTCTCTTCTTCCCTCCAAACGCAAACATTCTTCCACAATCCAATCCCAAACCTCCAACACCAACCCACCACAACCAGAAG AATCTCCTTCATCTCCCTCAAAACCTCACAACCACCACCACCAAAATCCTCCTCTCCCCAACCCAACAAAACCCAAGAAG ATGGCATCCCCGTAGAAGACGTCAAAATCCTCGCCAAGTTCAAGTCCCGACACAACTACATCCGCGTCCTCGAAGTTTCC CGAAAAGCCGACCACCCCTTCCGCGGCTCCCGCCTCCTCCTCCTCGACGCCCCCGGAAACATCCACAGCATCTCCTTCCT CTTCAAGCCGCTCACCAACACCTACTTCGACGTCTTCGCCACGCTCCCACCTCTCCTCCCGCCCGGCCCCATCGCCGTCC TCGGCTTCGGCGCAGGCTCCGCCGCACGTCTCCTCCTCGAGCTTTACCCCGACGCGGTGGTCCACGGCTGGGAGCTCGAC CCCTCCGTGATCCAGGTCGCGCGGGAGTATTTCAACCTGGCAAAGCTCGAGAGGGAGCACAAGCGGAGGCTGTTTATCTA CGTCGGGGACGCTCTGGCGGCGAGTGTCCCGGAGGGATTCTCCGGGATCATGGTGGATTTGTTCGCGAAGGGGAGCTTGT TACCGGAGCTTCAGGAGGTTGCGACGTGGGAGAGGCTGAGGAGCTGTTTGAGGAAAGGCGGGAGGATTATGGTGAATGTT GGAGGGAGCTGTGTGGAGGCGGAGAATCGGCTCCGGGATGGGAAGGTTGTGATGGAGGAGACGTTGAAGGCGATGAAGGT GGTGTTTGGGGAGAAGCTTTTTGTTCTTGGACTTGGGAATCGGAAGGATGATAGTTCTCTTGCTCTCACTGGGAATTTGC CTCAAGGTGATGCATGGAAGAATGCTCTTCAGCCTCCTTTGAGATATTATGTTGATTTATGGACAACATTTTCTGGGTGA ACACTCTCATGATGTTGCTCGCCAAGTGTTTGTGTTTATTCCTCTGTGAAATGTATTTTTCAACCCTTGGTGTTGAAGGA AGAAGGATATGGTGATTGTAATGTAAACTACTCCAATTGTAAGCAAGGTTCATAAAGTAAAGTATGCACTTGAAGGGTAT TTGAATTTTACACAATTTTGTAGGGTTTAACTAGAATCCGAGAGTTTATTTGG
CDS sequence (LotjaGi4g1v0229900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGACGATGCTCTCTTCTTCCCTCCAAACGCAAACATTCTTCCACAATCCAATCCCAAACCTCCAACACCAACCCAC CACAACCAGAAGAATCTCCTTCATCTCCCTCAAAACCTCACAACCACCACCACCAAAATCCTCCTCTCCCCAACCCAACA AAACCCAAGAAGATGGCATCCCCGTAGAAGACGTCAAAATCCTCGCCAAGTTCAAGTCCCGACACAACTACATCCGCGTC CTCGAAGTTTCCCGAAAAGCCGACCACCCCTTCCGCGGCTCCCGCCTCCTCCTCCTCGACGCCCCCGGAAACATCCACAG CATCTCCTTCCTCTTCAAGCCGCTCACCAACACCTACTTCGACGTCTTCGCCACGCTCCCACCTCTCCTCCCGCCCGGCC CCATCGCCGTCCTCGGCTTCGGCGCAGGCTCCGCCGCACGTCTCCTCCTCGAGCTTTACCCCGACGCGGTGGTCCACGGC TGGGAGCTCGACCCCTCCGTGATCCAGGTCGCGCGGGAGTATTTCAACCTGGCAAAGCTCGAGAGGGAGCACAAGCGGAG GCTGTTTATCTACGTCGGGGACGCTCTGGCGGCGAGTGTCCCGGAGGGATTCTCCGGGATCATGGTGGATTTGTTCGCGA AGGGGAGCTTGTTACCGGAGCTTCAGGAGGTTGCGACGTGGGAGAGGCTGAGGAGCTGTTTGAGGAAAGGCGGGAGGATT ATGGTGAATGTTGGAGGGAGCTGTGTGGAGGCGGAGAATCGGCTCCGGGATGGGAAGGTTGTGATGGAGGAGACGTTGAA GGCGATGAAGGTGGTGTTTGGGGAGAAGCTTTTTGTTCTTGGACTTGGGAATCGGAAGGATGATAGTTCTCTTGCTCTCA CTGGGAATTTGCCTCAAGGTGATGCATGGAAGAATGCTCTTCAGCCTCCTTTGAGATATTATGTTGATTTATGGACAACA TTTTCTGGGTGA
Protein sequence (LotjaGi4g1v0229900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWTMLSSSLQTQTFFHNPIPNLQHQPTTTRRISFISLKTSQPPPPKSSSPQPNKTQEDGIPVEDVKILAKFKSRHNYIRV LEVSRKADHPFRGSRLLLLDAPGNIHSISFLFKPLTNTYFDVFATLPPLLPPGPIAVLGFGAGSAARLLLELYPDAVVHG WELDPSVIQVAREYFNLAKLEREHKRRLFIYVGDALAASVPEGFSGIMVDLFAKGSLLPELQEVATWERLRSCLRKGGRI MVNVGGSCVEAENRLRDGKVVMEETLKAMKVVFGEKLFVLGLGNRKDDSSLALTGNLPQGDAWKNALQPPLRYYVDLWTT FSG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 26 | 321 | 296 | 3.2E-123 | – | |
| PANTHER | 26 | 321 | 296 | 3.2E-123 | – | |
| MobiDBLite | 37 | 59 | 23 | - | – | |
| SUPERFAMILY | 63 | 248 | 186 | 2.63E-28 | ||
| Gene3D | 69 | 290 | 222 | 2.0E-28 | – | |
| CDD | 135 | 242 | 108 | 6.53345E-6 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0229900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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