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LotjaGi4g1v0241900.1

Overview

Field Value
Gene ID LotjaGi4g1v0241900
Transcript ID LotjaGi4g1v0241900.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Nuclear mitotic apparatus 1; TAIR: AT1G19010.1 hypothetical protein; Swiss-Prot: sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2; TrEMBL-Plants: tr|A0A072UQE2|A0A072UQE2_MEDTR Uncharacterized protein; Found in the gene: LotjaGi4g1v0241900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:59008083..59015896) extracted from Lotus japonicus Gifu genome v1.2.

CCTAGTGGGACTTTCACTTCCTAACAGACTCACACAGCTACTTCTCCTGTTCTCGTTGTATATAGAGAAGAGGGAAAACC AGCAACAACAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAACAAACTCCCAATCCATCATTTCTCACTCGTGTTCCTC GTCGTTTGTCTCAACCAACCAACCACCAACGCCAACAACAACATCATCGTCCTGATTCTGATGCATTAAACAACAACAAT GGAGGATTCTGAGGTAAACCGTTTCCGCTCCCACCCGTTTTCAACTGCTTTTTCCTTTTTCTCTCGCCGCTAACCCCTTT TCTTCATTGATTTTTTGTTTCATGGGGTTTGAGTTTTACCGGGAATGGTTTACTACTATGGTTGTTTCTGATTTTGTGGT AGGTTTTGGTTTTTGATTTTGATTCTGTTTTTTTTTTTCTTGATTAGAAATTGACGCCTTTGAAGAAGGCTTATGCGGAA ATCATACTGAACACGACCAAGGAAGCCGCTGCGCGTATCATGGTGGCGGAGAGGAAGGCGACTCGCTTTCAGCATGAGCT TGCTTCTAGTAAAGATCAGGCTCTTCAGATGATGCTCGGGCTCAAGCAAATGCTTGATTCCAAGGTATACGAATCATGCT GCAAAGGGTTGCTTATCTTTTTGATAAAGTTATGTTCTTTTTCACTTTTGTGCTTCTGTCTGTTTTTTCAATTTAGCTTT AGCAAGTCTTGGTCGGGTTTTTAACCTAAAGTTTTGAGCTTCCCATTTTACTGGGATAGTTTTGGACTAAATTTTGCTGA TCAAATTTCCGATCAAATTTGATCGTTGAAATGGATGGCAGAAAAGTTAAATTTTGATTTTGAAGATGGATATCTTTCAA TCCCTTAAAATGTGGGTTACCTTTGTAATGGTTATACAGTATTATTATTTATGTTGAGCTTGTCCTCTCATTGATATCAT CAATGTTAGGCTTCTTGAACATCCTTGGTCTAAGAGTTCTTCTGAATCATCACGCTGCTGTTGTCGATTAATTTCTTCTT CATTAACACTTACTTTTTTATTTTATGTTTGACAAAGTTCTTTGCTAAGAATAAGGATTGGCTATATTTTATTGTATGAC CTTTGTGGTGGTCATTAAAGGAAAGCAATCAATGTACATTCGTGTAAGTATTTGATACTGTATATTTATGAATCAGTGTT AGGGGATCAACTACCACATGCAATTGCCTAACTCTCCATCAATTTACTCAAAAGTCTTGTTTTGTGGATGAAGATAACTT GTATTATTGTTCCAGCTTTTGAGCCCAAACTCAACTGTCTCGTAACATATTCTATTAAGAGCTTACGCATGGAAAATACT AACATTCGTGTAATTTCATATGCGAACCTACCATTAAGGTTTGGTCGCTTGTCTCTGGTTATGCTTGACTAATGGTAATT TTACAGGTCAAAGAATCAGAATTGACATCATTGAATCAGCAGAAGAAGATTGAGGAGCTTGAAGCTCAGCTCGGAGAAGC TGAGGAAATAGTTAGAGACCTCAGGGCAGATTTGAGAGAAACACAGGTTGTGCTGGAGAATGTCACAAAGTACCGAATGA ATCCCCCAGTTGAACAAAACATAAAGGGTGAAGTTGCTGCTCAGGAAAATTTACTGCAGGAGAAAAGATTTGATCCTTAT GATGGATCTGTGCATTCGGCATCCAGTTTACAGTTTGAATCACACTCAATTTCTGACACTAGGTTCCCAGCTGTAAATGG AACAATTGATAGCAATGAGTTATGTATGTCACATGATCATACAAAGAACTGCTACATTCACAACACAGATTTTGCATCCA TAGTTATTAGGAGGAAAGAGCCTGAGCTCTACAGAAATGGATGTACTCAGAGAATACGTGCATTTGAAAGGAGTCCTTTT TATGGAAATGAGTCTGTTTCAGGAAATTTAGATAATGTACAGGATCAAACTTTAGTAAGAGCACATGAAGAAGGTAAAGT TATGATTGTAGCAACCAATGTCAAAGCTGATGTTATTTGTGAAAAGGAAAAATCAGATGAACTTAAAGTGGTGAAAGCAG ATGCTGACATTGTCAAAGTTCATGATCGTAGAAAAAAGAGAGGACTTAAGACCATGAAGGTTCATCGATCTAGATTACAT TCTGACCAGGTTAAGGAAACAAGTAAAGAATCTTATATGTCTTCTGCCAAAGATTCTCCACATGTGCTGGATAACAATGA CCTTTCCAGTGGGAATTCTTCTATGGAATATGAAAGTGAAGCTCAGAAGGATCTGATGTCTCCTAATTCCAAAGTACCCA CAGACACAACTGCAACAATTGAGCAATCAGGACCTCATAGCTGTGCTGAAAAAGGGGAAGAACTTCTTGAAGGCTTCAGT GCTAGGAACCAAATCAAAGATGATAAGGAACCACTGGATAAATCATATTTGACAAGACAAGACAGTTTGTCCACTAAAAG TTTGGAGGTTCCAGCTTGTAAAGATGTTGAGGTAGCTAATGTGTCACCAGAACAAATGGATCCCAAACTTTCTGATTTAG TTCTTGTTGGTAGAAAAAAGAGAACACTTAAGTTGATGAAGGCTTATCAATCTAGATTACATTCTGACCAGGTTAAGGAA ACAAATAAAGAATCTTATCTGTCTTCTGCCAAAGATTCTCCACATGCACTGGATAACAATGACCCTTCCAGAGGGAATTC TTCTATGGAATATGAAAATGAAGCTCAGAAGGATCTGATGTCTCCTACTGCCAAAGTACCCACAGATGCCACTGCATCAA TTGAGCAATCAGGACCTCATAGCAGTACTGAAAAAGGGGAAGAATTTCTTAAAAGCTACAGTGATAGGAACAAAATCATA GATGATAAGGAACAACTGGATAAATCAGATTTGACTAGACAAGACAGTTTATCCACTGAAAGTTTGCAGGTTCCAGCTTG TAAAGATGTTGAGGCAGCTAATGTGTCGCCAGAGAAAATGGATCCGAAAGTATCTGATTCAGAGGAGAAGGTTTCTAGTC GATCTGTAAAGGATAAGTTTCTAAAGTACACATTCCATAGAAAGCGTAAGAAGGAGTCTGTTAGCAGTGATGGTGTAGAT TGCTCTCCAGATAATAGCAGTTCAAAGAAAAGGTGTGGAGAGAAGCAAAATGTTCATGCGGAGCCTCAGGAGTCTTGCAC AAAGACTGAATCATCACGGGAAAGCCGACGACTAGCACAGGTTGCTCGTCAGGTTGGTGATATATATGTGAATGCCTGTT TTTCTCTTTCACTGTTTTGGCCCTTTTGGGTATGCATGTTTCTGTTTGCCTGTCCATACATTTGCAAACTATGTGCTTTT GTATCTGTATCAATAAACTACTGTTCTATTTCAAAGATGGTTGTAGCCAGGTGGAAGTTTTATGTTGTCAGTTGTTGACA AGGGAAATTGATTACATTGACTGTTGTTTTATAAAGTTTTGGCATACCTAGTTAGAAATAGACAATTAGTTTCTATACAT GGTAAGTTTGTGAGCCTTAAGGGTTTTAATGGTCATGGTAAGACCTAAGAGTTGGTGTTTATACAAGTCCAAGACAGAGG ACTGTATGACTTAAGCTATATGTATCAGAAAGTTACCATTTATAAATGTAGCATTCACTAGCCGTGTCGAAGGTACCAGA GAAACAAATTGTAACTTTGGAGTCTATGCCCCTCTATGAAGTTTGTGCTTGAATATTATGGCGTCATGTGCTCCATTTGG CTAACCCCACTTAATTGGAAATAGGCTCAGTTGTTGTTGTTGTTTCCAAAATAGATAACAAAGGGAAAATATCTCTGTAC AAAAACAATTGATATGACCACCTTGTACCTTCTCCATGTCTGACAAATAAACTACCCTTTACATTATTTGGGAAATTTTG TGAAACCTCTAAATGTGAAGGAGCTATAGTTGTTTTCCTGTTGAGCTTGATTTATTGTGTAATACAGAGCTGTGCAAATG TTCAAGGAGTCTTTCTATTGTTGTAATTTATTCTGGCAGGTGGAAAATAGAGTTAGTATTTTTTTCCCTTTCACTATTAT ACTTGGAAAAGAGGGCGACCTCGGCGCAACGTTAAGGTTGCTTCCATGTGGCTTTGCGGTCACAGGTTCGAGCCGTGGAA TTAGCCTCTTCCTAAAATGCAAGGTAAGGCTTCCATGGACCTCGCGCATAGCGAGAGCTTTATAGCACCAAGTTTGCCCT TTATACTTAGTAAAGGGATATTAACATTGATTTATACAGACATGTGACTAAAACATCAATATTCTTCCACATTATCTATG TAGGAAAATTTGCATGCACATAATTGTAATGTAAGCTACTAGATCTTTTGGAAGGATGATAGGTAACTGTTAGTGAGAGT TACTTAATGCAATAGTTAGCTAGTTAAGGAGTTGGTTAGAGGGTGAGAGATATATAACTAACAGAAAGGGGAGATTAGAG GGTCATATCTTGAGATTGGAAAGGAAATATGGGAGAGTTCCAGGTCTCTCGAATACCAGGTGTAAGAGAAGGTTTTCTAT CAATGAACATTGTTTCTACTATATTCAAACCAATTCCTATCAATTGGTATCAGAGTTCCATCCTGGAGTTGAGGGTAACT TGAGGGCGAGACTCATGGTCAGCTATAAAATGGAGGTAAAATTGGAAACAATTGAGAGGGGTCATCATTGTTCCATCCAG GAGCAGAGGGTAACCTGAGGGACGAGACTCATGATCAATGAGAAAATGGAGGGAAGATTGGAGACAGTTGAGAGGCTCCT TGAGGTGTGGAAAAGGGAAGATTGGTCGTGCAACGCAATCAGAGAGAGGGGGGATGTGAACTTAAGCTGTGACAGAGGAG ATAATCGAGTCAGAAGGAGAGAAAACCGGCATCTGGAGGAAGCTTTTGATTCTGTTAGGATGGTTGATTAGCTGAATAGA TTGGAGAAAAGGCAGCAAAACTCTTTGATAGTCAGAAAACTATTGGGTTTCTTGTAATCCAGTCAGCCCACAATCATCGC CACAGGAACTGCGAGACAATGTGTTTGTACTGAGCCGAAGGCAACTTTAGCATCAAAGATGGTCATCTGCGAGGGACAGT GTAACAAGTTTGATCAAGGATAGAGTTGTTTAAAGCGAGCACCACCTATGAGGTGAATCTTTAGGGGGGGAGTACTGATT GGTAATTGTAAGTGAGATTTAGTTAGTGTAATAGTTAGTTCAGAGTTTATTAGAGAGTGAGAGATATGAAGGGTTATAAC AACAAAAAAGGGAGACTAGAGGATCTGCCTTGAGATTGAAAAGGAAATTTGGGAGAGTTCTAGGTCTCTTGAATACCTGG TGTAATATAGAGTTTTCTACCAATTAACATTGTTTTTTATATATTCAAACCGGTTCCTAACAAAGGATTAACATTATTTT TTTGGAGAATGAAGATAGTCGATATCAATGACATTGCAAATAAATGATATATTTCTATTTATTTCAGGCAAGTTGAGAGG AAGATCACTTTGAGAAGTATCTCCAGTTTTGAGCTGCACTGAACATATAACATTTGTTAATTTTGACTCTTTTTCCATTT AGATGTAAGACCCTTAAGAGTTAAGAGACTTTATCATGCTCCTTTGTTTGGTGAGAAAAGTCATGAGTTGATGATTGATT ATCATAACACTTTCAAGTCCTTTTTGAACTGCTATTGAAGTTCCCAACTGTTCCCCAAATCCTTCCCGTTTTCCTTTTCA ACCTTCTTATGAAGAACAGTTAATATTGTTGTGATCCTTTGGAAGATTTTAAAGTATTAATGATGATTAAATCTGATATT CTGAATCCCTTGAGCTGAGTTGTAGACAAATCTCATCCAAAGATTCTTTCTTGGCTTCAGGGTCAGGGAAGTTAGCAATT GCATTTCACGTAGCTATTGTACCATCCCTGCATGTCACACAGCCTCCTCATGATGCACTGCTCATCACATCAAGTTCTAA TTATTGGAGCGGCCATCACGACCTGCTGTCTCTGCAATTCACCGATGCGGCTCCCTTTTTTTCTATTGTCTCCCATTATT TCAGAAGGTTTTTTTTGTTGATTCTTGTCTTGGTCAGAAATGTTTTAGGAAAACTATATCTTCAAACTCATTCCACCCAC ACCCAATAGAGAGAGATAGGAATAGAAAAGAGAGAAATGTGAGATATGATGAGTGGTGTGATAGAAACAAAAGAGAGAGA TAGGAAGAATAACTGGTGGAAATGAGATGTTAGAGGTGTGAATATATCAAAATTGAATGTTTTACGATTGGAAACTTTCT GCAAGCAATATTATTTGCCTTTGCCTTTCGTTTGAGCTTCAAAAATCGTCCGATCAAACCCTTTGGCCTTAGCAATATTT CTGGTAACCCACTCGCATTCTGTGCTTTTCTGTCTTCAGTGCAATTCCTTACTCATTTCTTCAAGCCCTCCTCTGACCTT TTTCTCCCCTTTCCCGCTGTGTTATGTTATGTACTTTGCACTCGCAGACCATTATTTTTGTCCTCTCAAGTCTATTCCTC TGTTCTTATTTCCCTTTCCACTTTTCTATCAGTTCCAAGATATCATCTTCCTTTTCTCTTTTTGAATTCATTCCGATGTT CTCATTTCTCTTTGTGGCTAGGGCATCATCTTAGAGGTAATGATTCTAATTACGGAAAATTTTGTGATGACTTCAAATTT TTTGTTAGTTAAACCTTCAAGGCTTTGAATGTCTTTTTCCCCTTTTGCTCCTTGACTTTTGTTGTTATTAGCTAACTAAT TATGTCTTTAAGATTTTTTACGGTTATTAATGGATGGTGAATCTGACTTTGAGATTTTTGGCTTGAAAAAATTTGACACA TTCAAAATGATACTCCTTCTATTGAGTTGAGTTCAGTCTCTCTAAGTGTAGTTGTGTGTTTCTCCTATGCTTCTTGAATA TCATCTTTTCTGAATTTGCTTTAAATTGTAAGCTTCCATTAGCTTCGGCTTTATTTTATGATTTTTGGGTCATATATTTT CAAGAATCACAAACATACTGACATGTTTTTTTATTTTCCAATTTTGTTGGCAGCTCATATCCTTATCTGAGAAGAAATGG TGGCAGTAGATTTGTGATTTGTCTATTGCTGTGGTGAGTGGACTGGATGGCAAGAGGGTTTAGATTCCAAGCACAATCCA AGGCTGTTATTGTTTTCTGGAGTTGGCCTTTCATGGAAGCTTTGTGTTGATAGAGCTGTGGAATGTGTTAATATTACATG TTATTACACTCTATGACTATAACTTTTTTTATTTCATCCTTAGTATAGCAATTGCTACCCTTACATCCTACATAACGTAA ATTCCATTTGTTGTTGCTGCCCTTTTCTTAGGGTCATGTTTGCAATACAAATTTTGCTGGTTATATTTTAGTTATATAAT CGTTAATGGTATTTGCTTTTTCATTATTTTACCTTTCAAGAGTATGTGTCTCTTTTTGCTTGGCTGTTTTTTGCTTTAAA ATATTGTGCAATCAGGCCAAGTTTTGCTGGTTATAATCAGAGAAGAGTCTTGAAGGGGTTTTGAACGGTTTTCAAAAATT CTCCAAATCTGTTCCCCTCTTTAAAATCTCCAAAACAAGGGGAGAGGTAGAGCTTCTCATAAATCTTCCCCCATCATTTT CTTCTCGTCCAAAATTCAACTCACAAATCCAAAAAGACAATGAATATCAAAGGAACTTAAGATAGTGTTTGGCCGGAGGG GAGGGGATGTGTTTTTTTTCAAAATAATAGTGTTTGGTTCAAGTTGTAGGAGGG 

CDS sequence (LotjaGi4g1v0241900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGGATTCTGAGAAATTGACGCCTTTGAAGAAGGCTTATGCGGAAATCATACTGAACACGACCAAGGAAGCCGCTGC GCGTATCATGGTGGCGGAGAGGAAGGCGACTCGCTTTCAGCATGAGCTTGCTTCTAGTAAAGATCAGGCTCTTCAGATGA TGCTCGGGCTCAAGCAAATGCTTGATTCCAAGGTCAAAGAATCAGAATTGACATCATTGAATCAGCAGAAGAAGATTGAG GAGCTTGAAGCTCAGCTCGGAGAAGCTGAGGAAATAGTTAGAGACCTCAGGGCAGATTTGAGAGAAACACAGGTTGTGCT GGAGAATGTCACAAAGTACCGAATGAATCCCCCAGTTGAACAAAACATAAAGGGTGAAGTTGCTGCTCAGGAAAATTTAC TGCAGGAGAAAAGATTTGATCCTTATGATGGATCTGTGCATTCGGCATCCAGTTTACAGTTTGAATCACACTCAATTTCT GACACTAGGTTCCCAGCTGTAAATGGAACAATTGATAGCAATGAGTTATGTATGTCACATGATCATACAAAGAACTGCTA CATTCACAACACAGATTTTGCATCCATAGTTATTAGGAGGAAAGAGCCTGAGCTCTACAGAAATGGATGTACTCAGAGAA TACGTGCATTTGAAAGGAGTCCTTTTTATGGAAATGAGTCTGTTTCAGGAAATTTAGATAATGTACAGGATCAAACTTTA GTAAGAGCACATGAAGAAGGTAAAGTTATGATTGTAGCAACCAATGTCAAAGCTGATGTTATTTGTGAAAAGGAAAAATC AGATGAACTTAAAGTGGTGAAAGCAGATGCTGACATTGTCAAAGTTCATGATCGTAGAAAAAAGAGAGGACTTAAGACCA TGAAGGTTCATCGATCTAGATTACATTCTGACCAGGTTAAGGAAACAAGTAAAGAATCTTATATGTCTTCTGCCAAAGAT TCTCCACATGTGCTGGATAACAATGACCTTTCCAGTGGGAATTCTTCTATGGAATATGAAAGTGAAGCTCAGAAGGATCT GATGTCTCCTAATTCCAAAGTACCCACAGACACAACTGCAACAATTGAGCAATCAGGACCTCATAGCTGTGCTGAAAAAG GGGAAGAACTTCTTGAAGGCTTCAGTGCTAGGAACCAAATCAAAGATGATAAGGAACCACTGGATAAATCATATTTGACA AGACAAGACAGTTTGTCCACTAAAAGTTTGGAGGTTCCAGCTTGTAAAGATGTTGAGGTAGCTAATGTGTCACCAGAACA AATGGATCCCAAACTTTCTGATTTAGTTCTTGTTGGTAGAAAAAAGAGAACACTTAAGTTGATGAAGGCTTATCAATCTA GATTACATTCTGACCAGGTTAAGGAAACAAATAAAGAATCTTATCTGTCTTCTGCCAAAGATTCTCCACATGCACTGGAT AACAATGACCCTTCCAGAGGGAATTCTTCTATGGAATATGAAAATGAAGCTCAGAAGGATCTGATGTCTCCTACTGCCAA AGTACCCACAGATGCCACTGCATCAATTGAGCAATCAGGACCTCATAGCAGTACTGAAAAAGGGGAAGAATTTCTTAAAA GCTACAGTGATAGGAACAAAATCATAGATGATAAGGAACAACTGGATAAATCAGATTTGACTAGACAAGACAGTTTATCC ACTGAAAGTTTGCAGGTTCCAGCTTGTAAAGATGTTGAGGCAGCTAATGTGTCGCCAGAGAAAATGGATCCGAAAGTATC TGATTCAGAGGAGAAGGTTTCTAGTCGATCTGTAAAGGATAAGTTTCTAAAGTACACATTCCATAGAAAGCGTAAGAAGG AGTCTGTTAGCAGTGATGGTGTAGATTGCTCTCCAGATAATAGCAGTTCAAAGAAAAGGTGTGGAGAGAAGCAAAATGTT CATGCGGAGCCTCAGGAGTCTTGCACAAAGACTGAATCATCACGGGAAAGCCGACGACTAGCACAGGTTGCTCGTCAGCT CATATCCTTATCTGAGAAGAAATGGTGGCAGTAG 

Protein sequence (LotjaGi4g1v0241900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEDSEKLTPLKKAYAEIILNTTKEAAARIMVAERKATRFQHELASSKDQALQMMLGLKQMLDSKVKESELTSLNQQKKIE ELEAQLGEAEEIVRDLRADLRETQVVLENVTKYRMNPPVEQNIKGEVAAQENLLQEKRFDPYDGSVHSASSLQFESHSIS DTRFPAVNGTIDSNELCMSHDHTKNCYIHNTDFASIVIRRKEPELYRNGCTQRIRAFERSPFYGNESVSGNLDNVQDQTL VRAHEEGKVMIVATNVKADVICEKEKSDELKVVKADADIVKVHDRRKKRGLKTMKVHRSRLHSDQVKETSKESYMSSAKD SPHVLDNNDLSSGNSSMEYESEAQKDLMSPNSKVPTDTTATIEQSGPHSCAEKGEELLEGFSARNQIKDDKEPLDKSYLT RQDSLSTKSLEVPACKDVEVANVSPEQMDPKLSDLVLVGRKKRTLKLMKAYQSRLHSDQVKETNKESYLSSAKDSPHALD NNDPSRGNSSMEYENEAQKDLMSPTAKVPTDATASIEQSGPHSSTEKGEEFLKSYSDRNKIIDDKEQLDKSDLTRQDSLS TESLQVPACKDVEAANVSPEKMDPKVSDSEEKVSSRSVKDKFLKYTFHRKRKKESVSSDGVDCSPDNSSSKKRCGEKQNV HAEPQESCTKTESSRESRRLAQVARQLISLSEKKWWQ 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 435 435 9.8E-217
PANTHER 1 435 435 9.8E-217
Coils 65 99 35 -
MobiDBLite 296 369 74 -
MobiDBLite 310 366 57 -
PANTHER 440 676 237 9.8E-217
PANTHER 440 676 237 9.8E-217
MobiDBLite 454 597 144 -
MobiDBLite 464 496 33 -
MobiDBLite 508 522 15 -
MobiDBLite 523 556 34 -
MobiDBLite 583 597 15 -
MobiDBLite 612 658 47 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0241900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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