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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0241900 |
| Transcript ID | LotjaGi4g1v0241900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nuclear mitotic apparatus 1; TAIR: AT1G19010.1 hypothetical protein; Swiss-Prot: sp|Q6KHN7|SYI_MYCMO Isoleucine--tRNA ligase; TrEMBL-Plants: tr|K7MKT1|K7MKT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0241900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:59008425..59016074) extracted from Lotus japonicus Gifu genome v1.2.
TGTCAATGCGGTCAGTGATGGGTCCACGTTAGCAGTCCGAGATGGATCAGGACCCACGGGAGAAAAAACAACAAAACACG AGGAAGAAAACCCGGGCCCGCACCGGTGTAACGGTTTGAGTTTTCGACGTGGTAAATGACTAAATGTAATTGCGCGAAGG ACAATCTGGTAAACTCACCCTAGTGGGACTTTCACTTCCTAACAGACTCACACAGCTACTTCTCCTGTTCTCGTTGTATA TAGAGAAGAGGGAAAACCAGCAACAACAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAACAAACTCCCAATCCATCAT TTCTCACTCGTGTTCCTCGTCGTTTGTCTCAACCAACCAACCACCAACGCCAACAACAACATCATCGTCCTGATTCTGAT GCATTAAACAACAACAATGGAGGATTCTGAGGTAAACCGTTTCCGCTCCCACCCGTTTTCAACTGCTTTTTCCTTTTTCT CTCGCCGCTAACCCCTTTTCTTCATTGATTTTTTGTTTCATGGGGTTTGAGTTTTACCGGGAATGGTTTACTACTATGGT TGTTTCTGATTTTGTGGTAGGTTTTGGTTTTTGATTTTGATTCTGTTTTTTTTTTTCTTGATTAGAAATTGACGCCTTTG AAGAAGGCTTATGCGGAAATCATACTGAACACGACCAAGGAAGCCGCTGCGCGTATCATGGTGGCGGAGAGGAAGGCGAC TCGCTTTCAGCATGAGCTTGCTTCTAGTAAAGATCAGGCTCTTCAGATGATGCTCGGGCTCAAGCAAATGCTTGATTCCA AGGTATACGAATCATGCTGCAAAGGGTTGCTTATCTTTTTGATAAAGTTATGTTCTTTTTCACTTTTGTGCTTCTGTCTG TTTTTTCAATTTAGCTTTAGCAAGTCTTGGTCGGGTTTTTAACCTAAAGTTTTGAGCTTCCCATTTTACTGGGATAGTTT TGGACTAAATTTTGCTGATCAAATTTCCGATCAAATTTGATCGTTGAAATGGATGGCAGAAAAGTTAAATTTTGATTTTG AAGATGGATATCTTTCAATCCCTTAAAATGTGGGTTACCTTTGTAATGGTTATACAGTATTATTATTTATGTTGAGCTTG TCCTCTCATTGATATCATCAATGTTAGGCTTCTTGAACATCCTTGGTCTAAGAGTTCTTCTGAATCATCACGCTGCTGTT GTCGATTAATTTCTTCTTCATTAACACTTACTTTTTTATTTTATGTTTGACAAAGTTCTTTGCTAAGAATAAGGATTGGC TATATTTTATTGTATGACCTTTGTGGTGGTCATTAAAGGAAAGCAATCAATGTACATTCGTGTAAGTATTTGATACTGTA TATTTATGAATCAGTGTTAGGGGATCAACTACCACATGCAATTGCCTAACTCTCCATCAATTTACTCAAAAGTCTTGTTT TGTGGATGAAGATAACTTGTATTATTGTTCCAGCTTTTGAGCCCAAACTCAACTGTCTCGTAACATATTCTATTAAGAGC TTACGCATGGAAAATACTAACATTCGTGTAATTTCATATGCGAACCTACCATTAAGGTTTGGTCGCTTGTCTCTGGTTAT GCTTGACTAATGGTAATTTTACAGGTCAAAGAATCAGAATTGACATCATTGAATCAGCAGAAGAAGATTGAGGAGCTTGA AGCTCAGCTCGGAGAAGCTGAGGAAATAGTTAGAGACCTCAGGGCAGATTTGAGAGAAACACAGGTTGTGCTGGAGAATG TCACAAAGTACCGAATGAATCCCCCAGTTGAACAAAACATAAAGGGTGAAGTTGCTGCTCAGGAAAATTTACTGCAGGAG AAAAGATTTGATCCTTATGATGGATCTGTGCATTCGGCATCCAGTTTACAGTTTGAATCACACTCAATTTCTGACACTAG GTTCCCAGCTGTAAATGGAACAATTGATAGCAATGAGTTATGTATGTCACATGATCATACAAAGAACTGCTACATTCACA ACACAGATTTTGCATCCATAGTTATTAGGAGGAAAGAGCCTGAGCTCTACAGAAATGGATGTACTCAGAGAATACGTGCA TTTGAAAGGAGTCCTTTTTATGGAAATGAGTCTGTTTCAGGAAATTTAGATAATGTACAGGATCAAACTTTAGTAAGAGC ACATGAAGAAGGTAAAGTTATGATTGTAGCAACCAATGTCAAAGCTGATGTTATTTGTGAAAAGGAAAAATCAGATGAAC TTAAAGTGGTGAAAGCAGATGCTGACATTGTCAAAGTTCATGATCGTAGAAAAAAGAGAGGACTTAAGACCATGAAGGTT CATCGATCTAGATTACATTCTGACCAGGTTAAGGAAACAAGTAAAGAATCTTATATGTCTTCTGCCAAAGATTCTCCACA TGTGCTGGATAACAATGACCTTTCCAGTGGGAATTCTTCTATGGAATATGAAAGTGAAGCTCAGAAGGATCTGATGTCTC CTAATTCCAAAGTACCCACAGACACAACTGCAACAATTGAGCAATCAGGACCTCATAGCTGTGCTGAAAAAGGGGAAGAA CTTCTTGAAGGCTTCAGTGCTAGGAACCAAATCAAAGATGATAAGGAACCACTGGATAAATCATATTTGACAAGACAAGA CAGTTTGTCCACTAAAAGTTTGGAGGTTCCAGCTTGTAAAGATGTTGAGGTAGCTAATGTGTCACCAGAACAAATGGATC CCAAACTTTCTGATTTAGTTCTTGTTGGTAGAAAAAAGAGAACACTTAAGTTGATGAAGGCTTATCAATCTAGATTACAT TCTGACCAGGTTAAGGAAACAAATAAAGAATCTTATCTGTCTTCTGCCAAAGATTCTCCACATGCACTGGATAACAATGA CCCTTCCAGAGGGAATTCTTCTATGGAATATGAAAATGAAGCTCAGAAGGATCTGATGTCTCCTACTGCCAAAGTACCCA CAGATGCCACTGCATCAATTGAGCAATCAGGACCTCATAGCAGTACTGAAAAAGGGGAAGAATTTCTTAAAAGCTACAGT GATAGGAACAAAATCATAGATGATAAGGAACAACTGGATAAATCAGATTTGACTAGACAAGACAGTTTATCCACTGAAAG TTTGCAGGTTCCAGCTTGTAAAGATGTTGAGGCAGCTAATGTGTCGCCAGAGAAAATGGATCCGAAAGTATCTGATTCAG AGGAGAAGGTTTCTAGTCGATCTGTAAAGGATAAGTTTCTAAAGTACACATTCCATAGAAAGCGTAAGAAGGAGTCTGTT AGCAGTGATGGTGTAGATTGCTCTCCAGATAATAGCAGTTCAAAGAAAAGGTGTGGAGAGAAGCAAAATGTTCATGCGGA GCCTCAGGAGTCTTGCACAAAGACTGAATCATCACGGGAAAGCCGACGACTAGCACAGGTTGCTCGTCAGGTTGGTGATA TATATGTGAATGCCTGTTTTTCTCTTTCACTGTTTTGGCCCTTTTGGGTATGCATGTTTCTGTTTGCCTGTCCATACATT TGCAAACTATGTGCTTTTGTATCTGTATCAATAAACTACTGTTCTATTTCAAAGATGGTTGTAGCCAGGTGGAAGTTTTA TGTTGTCAGTTGTTGACAAGGGAAATTGATTACATTGACTGTTGTTTTATAAAGTTTTGGCATACCTAGTTAGAAATAGA CAATTAGTTTCTATACATGGTAAGTTTGTGAGCCTTAAGGGTTTTAATGGTCATGGTAAGACCTAAGAGTTGGTGTTTAT ACAAGTCCAAGACAGAGGACTGTATGACTTAAGCTATATGTATCAGAAAGTTACCATTTATAAATGTAGCATTCACTAGC CGTGTCGAAGGTACCAGAGAAACAAATTGTAACTTTGGAGTCTATGCCCCTCTATGAAGTTTGTGCTTGAATATTATGGC GTCATGTGCTCCATTTGGCTAACCCCACTTAATTGGAAATAGGCTCAGTTGTTGTTGTTGTTTCCAAAATAGATAACAAA GGGAAAATATCTCTGTACAAAAACAATTGATATGACCACCTTGTACCTTCTCCATGTCTGACAAATAAACTACCCTTTAC ATTATTTGGGAAATTTTGTGAAACCTCTAAATGTGAAGGAGCTATAGTTGTTTTCCTGTTGAGCTTGATTTATTGTGTAA TACAGAGCTGTGCAAATGTTCAAGGAGTCTTTCTATTGTTGTAATTTATTCTGGCAGGTGGAAAATAGAGTTAGTATTTT TTTCCCTTTCACTATTATACTTGGAAAAGAGGGCGACCTCGGCGCAACGTTAAGGTTGCTTCCATGTGGCTTTGCGGTCA CAGGTTCGAGCCGTGGAATTAGCCTCTTCCTAAAATGCAAGGTAAGGCTTCCATGGACCTCGCGCATAGCGAGAGCTTTA TAGCACCAAGTTTGCCCTTTATACTTAGTAAAGGGATATTAACATTGATTTATACAGACATGTGACTAAAACATCAATAT TCTTCCACATTATCTATGTAGGAAAATTTGCATGCACATAATTGTAATGTAAGCTACTAGATCTTTTGGAAGGATGATAG GTAACTGTTAGTGAGAGTTACTTAATGCAATAGTTAGCTAGTTAAGGAGTTGGTTAGAGGGTGAGAGATATATAACTAAC AGAAAGGGGAGATTAGAGGGTCATATCTTGAGATTGGAAAGGAAATATGGGAGAGTTCCAGGTCTCTCGAATACCAGGTG TAAGAGAAGGTTTTCTATCAATGAACATTGTTTCTACTATATTCAAACCAATTCCTATCAATTGGTATCAGAGTTCCATC CTGGAGTTGAGGGTAACTTGAGGGCGAGACTCATGGTCAGCTATAAAATGGAGGTAAAATTGGAAACAATTGAGAGGGGT CATCATTGTTCCATCCAGGAGCAGAGGGTAACCTGAGGGACGAGACTCATGATCAATGAGAAAATGGAGGGAAGATTGGA GACAGTTGAGAGGCTCCTTGAGGTGTGGAAAAGGGAAGATTGGTCGTGCAACGCAATCAGAGAGAGGGGGGATGTGAACT TAAGCTGTGACAGAGGAGATAATCGAGTCAGAAGGAGAGAAAACCGGCATCTGGAGGAAGCTTTTGATTCTGTTAGGATG GTTGATTAGCTGAATAGATTGGAGAAAAGGCAGCAAAACTCTTTGATAGTCAGAAAACTATTGGGTTTCTTGTAATCCAG TCAGCCCACAATCATCGCCACAGGAACTGCGAGACAATGTGTTTGTACTGAGCCGAAGGCAACTTTAGCATCAAAGATGG TCATCTGCGAGGGACAGTGTAACAAGTTTGATCAAGGATAGAGTTGTTTAAAGCGAGCACCACCTATGAGGTGAATCTTT AGGGGGGGAGTACTGATTGGTAATTGTAAGTGAGATTTAGTTAGTGTAATAGTTAGTTCAGAGTTTATTAGAGAGTGAGA GATATGAAGGGTTATAACAACAAAAAAGGGAGACTAGAGGATCTGCCTTGAGATTGAAAAGGAAATTTGGGAGAGTTCTA GGTCTCTTGAATACCTGGTGTAATATAGAGTTTTCTACCAATTAACATTGTTTTTTATATATTCAAACCGGTTCCTAACA AAGGATTAACATTATTTTTTTGGAGAATGAAGATAGTCGATATCAATGACATTGCAAATAAATGATATATTTCTATTTAT TTCAGGCAAGTTGAGAGGAAGATCACTTTGAGAAGTATCTCCAGTTTTGAGCTGCACTGAACATATAACATTTGTTAATT TTGACTCTTTTTCCATTTAGATGTAAGACCCTTAAGAGTTAAGAGACTTTATCATGCTCCTTTGTTTGGTGAGAAAAGTC ATGAGTTGATGATTGATTATCATAACACTTTCAAGTCCTTTTTGAACTGCTATTGAAGTTCCCAACTGTTCCCCAAATCC TTCCCGTTTTCCTTTTCAACCTTCTTATGAAGAACAGTTAATATTGTTGTGATCCTTTGGAAGATTTTAAAGTATTAATG ATGATTAAATCTGATATTCTGAATCCCTTGAGCTGAGTTGTAGACAAATCTCATCCAAAGATTCTTTCTTGGCTTCAGGG TCAGGGAAGTTAGCAATTGCATTTCACGTAGCTATTGTACCATCCCTGCATGTCACACAGCCTCCTCATGATGCACTGCT CATCACATCAAGTTCTAATTATTGGAGCGGCCATCACGACCTGCTGTCTCTGCAATTCACCGATGCGGCTCCCTTTTTTT CTATTGTCTCCCATTATTTCAGAAGGTTTTTTTTGTTGATTCTTGTCTTGGTCAGAAATGTTTTAGGAAAACTATATCTT CAAACTCATTCCACCCACACCCAATAGAGAGAGATAGGAATAGAAAAGAGAGAAATGTGAGATATGATGAGTGGTGTGAT AGAAACAAAAGAGAGAGATAGGAAGAATAACTGGTGGAAATGAGATGTTAGAGGTGTGAATATATCAAAATTGAATGTTT TACGATTGGAAACTTTCTGCAAGCAATATTATTTGCCTTTGCCTTTCGTTTGAGCTTCAAAAATCGTCCGATCAAACCCT TTGGCCTTAGCAATATTTCTGGTAACCCACTCGCATTCTGTGCTTTTCTGTCTTCAGTGCAATTCCTTACTCATTTCTTC AAGCCCTCCTCTGACCTTTTTCTCCCCTTTCCCGCTGTGTTATGTTATGTACTTTGCACTCGCAGACCATTATTTTTGTC CTCTCAAGTCTATTCCTCTGTTCTTATTTCCCTTTCCACTTTTCTATCAGTTCCAAGATATCATCTTCCTTTTCTCTTTT TGAATTCATTCCGATGTTCTCATTTCTCTTTGTGGCTAGGGCATCATCTTAGAGGTAATGATTCTAATTACGGAAAATTT TGTGATGACTTCAAATTTTTTGTTAGTTAAACCTTCAAGGCTTTGAATGTCTTTTTCCCCTTTTGCTCCTTGACTTTTGT TGTTATTAGCTAACTAATTATGTCTTTAAGATTTTTTACGGTTATTAATGGATGGTGAATCTGACTTTGAGATTTTTGGC TTGAAAAAATTTGACACATTCAAAATGATACTCCTTCTATTGAGTTGAGTTCAGTCTCTCTAAGTGTAGTTGTGTGTTTC TCCTATGCTTCTTGAATATCATCTTTTCTGAATTTGCTTTAAATTGTAAGCTTCCATTAGCTTCGGCTTTATTTTATGAT TTTTGGGTCATATATTTTCAAGAATCACAAACATACTGACATGTTTTTTTATTTTCCAATTTTGTTGGCAGCTCATATCC TTATCTGAGAAGAAATGGTGGCAGTAGATTTGTGATTTGTCTATTGCTGTGGTGAGTGGACTGGATGGCAAGAGGGTTTA GATTCCAAGCACAATCCAAGGCTGTTATTGTTTTCTGGAGTTGGCCTTTCATGGAAGCTTTGTGTTGATAGAGCTGTGGA ATGTGTTAATATTACATGTTATTACACTCTATGACTATAACTTTTTTTATTTCATCCTTAGTATAGCAATTGCTACCCTT ACATCCTACATAACGTAAATTCCATTTGTTGTTGCTGCCCTTTTCTTAGGGTCATGTTTGCAATACAAATTTTGCTGGTT ATATTTTAGTTATATAATCGTTAATGGTATTTGCTTTTTCATTATTTTAC
CDS sequence (LotjaGi4g1v0241900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGCGGAGAGGAAGGCGACTCGCTTTCAGCATGAGCTTGCTTCTAGTAAAGATCAGGCTCTTCAGATGATGCTCGG GCTCAAGCAAATGCTTGATTCCAAGGTCAAAGAATCAGAATTGACATCATTGAATCAGCAGAAGAAGATTGAGGAGCTTG AAGCTCAGCTCGGAGAAGCTGAGGAAATAGTTAGAGACCTCAGGGCAGATTTGAGAGAAACACAGGTTGTGCTGGAGAAT GTCACAAAGTACCGAATGAATCCCCCAGTTGAACAAAACATAAAGGGTGAAGTTGCTGCTCAGGAAAATTTACTGCAGGA GAAAAGATTTGATCCTTATGATGGATCTGTGCATTCGGCATCCAGTTTACAGTTTGAATCACACTCAATTTCTGACACTA GGTTCCCAGCTGTAAATGGAACAATTGATAGCAATGAGTTATGTATGTCACATGATCATACAAAGAACTGCTACATTCAC AACACAGATTTTGCATCCATAGTTATTAGGAGGAAAGAGCCTGAGCTCTACAGAAATGGATGTACTCAGAGAATACGTGC ATTTGAAAGGAGTCCTTTTTATGGAAATGAGTCTGTTTCAGGAAATTTAGATAATGTACAGGATCAAACTTTAGTAAGAG CACATGAAGAAGGTAAAGTTATGATTGTAGCAACCAATGTCAAAGCTGATGTTATTTGTGAAAAGGAAAAATCAGATGAA CTTAAAGTGGTGAAAGCAGATGCTGACATTGTCAAAGTTCATGATCGTAGAAAAAAGAGAGGACTTAAGACCATGAAGGT TCATCGATCTAGATTACATTCTGACCAGGTTAAGGAAACAAGTAAAGAATCTTATATGTCTTCTGCCAAAGATTCTCCAC ATGTGCTGGATAACAATGACCTTTCCAGTGGGAATTCTTCTATGGAATATGAAAGTGAAGCTCAGAAGGATCTGATGTCT CCTAATTCCAAAGTACCCACAGACACAACTGCAACAATTGAGCAATCAGGACCTCATAGCTGTGCTGAAAAAGGGGAAGA ACTTCTTGAAGGCTTCAGTGCTAGGAACCAAATCAAAGATGATAAGGAACCACTGGATAAATCATATTTGACAAGACAAG ACAGTTTGTCCACTAAAAGTTTGGAGGTTCCAGCTTGTAAAGATGTTGAGGCAGCTAATGTGTCGCCAGAGAAAATGGAT CCGAAAGTATCTGATTCAGAGGAGAAGGTTTCTAGTCGATCTGTAAAGGATAAGTTTCTAAAGTACACATTCCATAGAAA GCGTAAGAAGGAGTCTGTTAGCAGTGATGGTGTAGATTGCTCTCCAGATAATAGCAGTTCAAAGAAAAGGTGTGGAGAGA AGCAAAATGTTCATGCGGAGCCTCAGGAGTCTTGCACAAAGACTGAATCATCACGGGAAAGCCGACGACTAGCACAGGTT GCTCGTCAGCTCATATCCTTATCTGAGAAGAAATGGTGGCAGTAG
Protein sequence (LotjaGi4g1v0241900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVAERKATRFQHELASSKDQALQMMLGLKQMLDSKVKESELTSLNQQKKIEELEAQLGEAEEIVRDLRADLRETQVVLEN VTKYRMNPPVEQNIKGEVAAQENLLQEKRFDPYDGSVHSASSLQFESHSISDTRFPAVNGTIDSNELCMSHDHTKNCYIH NTDFASIVIRRKEPELYRNGCTQRIRAFERSPFYGNESVSGNLDNVQDQTLVRAHEEGKVMIVATNVKADVICEKEKSDE LKVVKADADIVKVHDRRKKRGLKTMKVHRSRLHSDQVKETSKESYMSSAKDSPHVLDNNDLSSGNSSMEYESEAQKDLMS PNSKVPTDTTATIEQSGPHSCAEKGEELLEGFSARNQIKDDKEPLDKSYLTRQDSLSTKSLEVPACKDVEAANVSPEKMD PKVSDSEEKVSSRSVKDKFLKYTFHRKRKKESVSSDGVDCSPDNSSSKKRCGEKQNVHAEPQESCTKTESSRESRRLAQV ARQLISLSEKKWWQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 493 | 493 | 1.3E-169 | – | |
| PANTHER | 1 | 493 | 493 | 1.3E-169 | – | |
| Coils | 36 | 70 | 35 | - | – | |
| MobiDBLite | 267 | 341 | 75 | - | – | |
| MobiDBLite | 281 | 337 | 57 | - | – | |
| MobiDBLite | 387 | 414 | 28 | - | – | |
| MobiDBLite | 400 | 414 | 15 | - | – | |
| MobiDBLite | 427 | 475 | 49 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0241900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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