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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0252500 |
| Transcript ID | LotjaGi4g1v0252500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | T-box transcription factor, putative (DUF863); TAIR: AT1G69360.1 T-box transcription factor, putative (DUF863); Swiss-Prot: sp|Q87QW2|MUKB_VIBPA Chromosome partition protein MukB; TrEMBL-Plants: tr|A0A1J7I2U4|A0A1J7I2U4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0252500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:60638991..60644529) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTAGATGTAAAATTAAACTAAATAATGAATAATAATGAAGATTAAAACAAATTCCATCCTTATAAGGATTATTAAAA TGTTTTGAAGAAGGAAAGAAGCAAAGCATGAGGGAGAGAATCTAGAGGGTGATAGCAGGACATGCATCATGATATATTTT TCTTGATGTATGAGAAAATCCAAATAAAACAAACATGAAAATTGAAAAGGATGATGTTGACGACTTTTAATGTCTCTTCC CATGTAAGTTTCATTTCTTCTAGGATCTTTCTTCTTTCTCTTTCTCTCTCCCAAATCTTCTTAGAATGCCCCTCTTGTAC TACTGTAGATCCAAATCCCCATTTTATCCGCTTTTTGATTTTTGGGTCGCTTCAGTTTTTCGCTTTCTTCTTCTCCGATT GTTTCTCTGCATATAGTCATTGTTGACTCTGTGTATGTAAGCTCTAGTTCAATTCATCTGCAACATTTCTGAATTGTTTG TTTTGATGGATTACTCATCAGTCATCACTTTGAAAAAGCGATTTCAGCTACTGGGTGTATCAGATTTTTGTTGGTTTGTT TGTTTTTCTACCTCAATTGTTGGTTCAGTTTTGTTTTTGTGACATGGGGTGATTTTGATTTAACTTGTTCCAGTTTCTGG CAAAAATTGACCAGGTCATTTTCTTCGTTTGATTATGGTGATGGGTTTAATTTTAATTTGACTGGATTTGTGTTGGACAT CTGGGTCTTATTTGTTTGAGAGATCTGTGTATCAGAAACTTTTACCCGATTCTTCACTTTTCTGTCCCCTTCCAGGAATT GGACTTGAATGCTCATTCTGATCGCGTTATGCGGTTCTGTTTTATGGAGATAATTGGTGCTGTGTTGATTGTTTACCTCA CAATTTATAAACTCTTCCAGCATTGATATGTTGATACTCTTTTTGATGTAAGTAAAATGTTGGCTACTGTTCTGTGACGA AAGCGTTTTGATACTAATCCTTTACTAAAATCCTTTTGTCATCATGGTTCATCTCCTTTACTAAACTTGTGTCATGTCTA TGCCTTGTGAATTACAATATTAACCGTAAAATAATGTAGAACAGCTGAAGAAGTTTGATAGACAATTGAAGATGGCTTGT TGCAGATCTTTGTTAATTTTTTATTCTGGTGTCATGCTGATTGACTCTCATATTTATTTCTCCAAAATGCTGTTTGTTTG AGGGTACTAGATTGCTACGAGGTCATATGGACTCGCGATCCAAAATTGTGATGTGTTTGCAAATTTTATTTGTTAATCGA ACTGTCAGATGATGTTGGTCCTGTCTCCAGGATACAAGAACTATCCAGTTGAATCTAGTAATTCTATTGGGTATACATAT TGATTACCTAGAAAAATTGATTCAGCTATTAACTGTTTTGTATTCCATGAAAAAGCCTATAAGTCAAAGTAAAATAGGTA GACCTTTTATGTTGTAGTTGTTCTTTTAGTGTACATTCTGAAAATTTCTTTTTTTTGGTTTGGATGCAGGTTTTCTTCCC CTGAAATCGCGGGATATCTTGTTTATTGAAACCTCTACACTATCATTAATGGCATTACTGGATGCAAACGTGCCATGCAA CGACTATTTTCCAGGACATTATTCGACAAAGGATGTCACTTTAGACCCTGAAGGCAGCACATGGACCTCATCTAATGTTA ATATTGAACTAAGGAATGACCGCCACCAGATGGGCTCCTTTCCAGTATCATCACCATGTACCCCTTTAGACTACAACAAG GAACTCCTAAAGCAGACAATACTCAACCAAGAAGCCATATTTAAGCACCAAGTATGTTAACTTCGTTATTTCTGTTCTTC TTAGACTAGATTCTTCTGTGTGTTCTCTTGCTCATTTCTGCTAAAATTTCCATGAGCTTTTTTTTTGTATTTTATTCAAA ACTATGATAAATGATATAATTTACTTAGGGCCTGTATGCTTTTCCGTTGCCCAAACATGAGATAAAAAATGTCATAAGAT CTTTTGGTTGCTTTTCTATGTTCTCTTTGATGCATTGAGATGGCAGAGAAGATGGGTCTTCTATATAATCTTTTAGGGTT TGAGGAAGATTGTTTCTGAAGAAATGGGCATTTTGGATTTTGAATTGGAAATTCAGTGTTTATAAATCGAGTTGTATTAA GGATATTAGGCAAATCAAATGCTAATATTTGCCCTATAGGCATACATGAAACATATTTATTGTAAACATCAGCCTTTTAA GTTATCAATGTATGAAATATTATACTTTTTGATAGATACTTTCTGTTTTGTGATTCGTTAACTAGAGCCCTTTGGGAGCA AAAATAAAACCTTATTTAGTCCAGTCAAATTTATTTTGAGTATTAATTATCATTAGTTTATTTTTGTTACCATTCTTAGC TCCTTGCTTATGGTTTTTTGTTATTTCTGACAATGTTGCTCTCCATTATTCTTGAGGGCTCATCAAACTCTTTTATTTTT TATGTCTTTTAACTCTGCAATCTGCATTGCTCTTCAGATTCATGAGCTCCACCGTGTTTACCACAAACAGAGGGAATTGA TGGATGAAGTTAAAAGGAATGAAGTATACAAACATAATTTAAGATTGGAGGCACCACGGTCAAGTTCCGCTTTGTCATCT GAAAACACTCAAAAGATGTTTTGCTTGCCAAGCCTGCCCTGGCCAACTGCTCAATCTTCTGTTTTAATTGCTGATAGTGT CGAGTTGCTGAAAGGAAAAAGCAGACAAATATGTTCTGCGCCTGCTCCTGCTTATGCTTCAGCTGAAACTGATGAATCTT TAAAAGACTATAACCTACCAGAGTCCAAGTACAGAAAAGTTGGCAAGAAGTTATTGGATCTTCGACTTCCTGCTGATGAG TACATTAGTACTGAAGAAGATGAAGAAAATGGAAGGGTTACTGAAGTGCCCCAGGTTTCAGCTTATTCTTTGACTGGAAC TTCTCAGGCTGTCCGTGACAGTCATGACAAATCATATGGAACTAATTCTAGAGGTTTTTCTGACTTAAATGTACCTTTTA AGCCTGAAGAAGCACCAGCTGCAAAGTCTTATGATTTGGGAGGGCCTACACACCAATGGAACAATCCCTTCTATGATCCG TCAAGAACAAAATTTGGATCTCAAAATTTGCCGAATGATGTCATCCAGAACTTGAGAAAGAGATCGTATCTCGAAGCTTG CTCAGATAACCCACTACTAGTACCACTCCGTGAGAACAAAAATGAGTGGCTGTCCTCAGGTAATATAGTACTGCTGACAA CTTGTCTCCAAGATTGTACTGAAGTTATTATTTTTCATTTTCAGATTTGTATACACACATACAATTATAATAACCGTCAT AACTATTATTGAGTTTTCAGGGCAAAGTGGTGGTTTATTGGATTCTTTTGCCAAAGGTATTTACACGGTAAACCCATCTG TTTCAGTTGAATCAATTAAGAATATGGATCAATTTAATGACCTTCCTTATTTTCATTTATTAGATCAAATCAACCGTGGA CCTTGGATAGAGAGAATATTTTCTAGCAGTGAGAGCTCTGCACAAACTCAAGGTCCCAACAGAAATGGCTTGTTTGGACC AAGCAGTGCATCGCATACATGTGCTCTACCGCAGCTTGTTTCTGGGGCTGACATGATAAGTTCTGAGATTTCACCAACAC AATTATGGAAAACACCTAGCCAACTAGCAGTTCAAGCATCTTCTGCATCATCTGCATCATCAGGTCAAATTTCTAAATCA TTTATGGGAATTTCTGGGTTCACTGGAGTTGACCTTTATCAGGGTACAAATGTTAAATCTGGCGCTGATTTAGAAAGCAA AAACTGTCTTCTGAGCTGCTTTGACGTCAGGTCCAAGCCGTTGGATCTTCCCTCTGTGAGTACTAATGATCTAAACAACT GTGACAACCATGGTTCATTAGATCACCATGAGCTTAGAAAGTGCGCTGAGGGTACCAAAGATGTAGGGACTCCCAAGAAC CTAAACCTTAATATGATGCCTGCTGGTTGTTCTGATTCAACAGCATTTCAAAGCATTCAGATAGCAGTTGAAGAAAATAA ATCTCAGGATTCATCAAGGGGGTTGAGTTGGCTCAAGGAAAAACCTAAAGGCGAAGGAAAACCCAATGAAGAGAATAAAA TCTCTACCCAAATTGAAGTCTTCCAGAGCCAATCCAAAGATCAAAGTATTGAACAAATTGAGAAAGGCTGCATTTCTGAT GACAAGTCACCCTGTATTGAAGTGCCTGACTTCGGGAAACAGATTCCTTCTGGTGAGCATTTGATAAAGAATGATCAGAA GAAACATGAATCTTTCGCAGGTCTGATTGACCTAAATTCAAGCATTGTAGAGGATGAGAATATGCCAATTGAAGTTGATT CTCATGCACCTGCAAGTCCAGAGAACAAGGAATGCTTGCCACCCAGAGGAGAATCTGAAGAAAACCTGCTTGAGATGCAG TCCCAATTGACAGAACAAGAGGCTCCAGAGGCGCAAGAAGAGAAGCAAATCAGAATCGCAGCAGAAGCTTTGGTTTCTAT ATCAGGACTTGGGGCCCACAAAGATCTCCACATGACAACTTTTTCATCATCTGAACCTTTTTTGGGCAGTCCTCTTCACT GGTTTGCTGGCATTGTTTCCGCCACAGTGGATCATCCTGATCCTGAGAAAGAAACCGAGGTGGATGCCAGTGATAAGGCT AATGATCTTGAGGGGCTTCTGCCTGCTAAAATGGATTACTTTGAGTTCATGACCTTAAAGTTGGCTGAGACAGAGGTAGA AGATTTCTGCTGTAAGAGTAAGGACCTAACTGAGCAAGTAGGTGCATCATCAACTCCACCCACACAGCTGAGGAAAGGGA GCCGGACTAATCGGGGCAGAGGGCGGCGGCGGAAGGACTTCCAAAGTGAAATCCTCCCAAGCCTTGCTTCTTTGTCTAGG CATGAGGTGACTGAGGATCTTCAGATGATTGGAGGTCTTGTAGGTTCTGCTGGTACTCACTCAGAGGCTGGTTCTCAAAG AAGTGCAGGTAGAAATGCATTGGGTAAGGGAAGGAGAAGATCCTGCACTTCAACCTCTAACATCACAGACTTGCTGTTGA CCTTGAAACAGCCAACTAGTTCTTCTAAATTGGGCATTGAGAAAAGAGGCCTAGTTAGTTGGGGAAAGATATGTAAGAAG CCAAGGGGAAAGAGGCTTCCTACTTCTAATCCCAAGTTTCTTTTGAGGCAAAGTATATAATTAATTCTAAGAAGTTCATG GACTGTTGATGATTTTTTTTTTTTAAGTTATAGGATGGTCTTGTAAATGTCTTTATAAACAATCATACAAGTGGTGTAAC TGAAGGATAGAAACAGTTATTTCTTGGGACTAAATGAATTCTCTTCTCCCATGTAGGAGATGGTCTTATAGCATGTTTGA ATAATTGGATAAGCTTATTTTTTTCTCAATTAATTCTAGCATCTGAAAACTAGTCACAAAAACTTCTCATAATTAATTTG GACGTCAGAATTGATCGTA
CDS sequence (LotjaGi4g1v0252500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATTACTGGATGCAAACGTGCCATGCAACGACTATTTTCCAGGACATTATTCGACAAAGGATGTCACTTTAGACCC TGAAGGCAGCACATGGACCTCATCTAATGTTAATATTGAACTAAGGAATGACCGCCACCAGATGGGCTCCTTTCCAGTAT CATCACCATGTACCCCTTTAGACTACAACAAGGAACTCCTAAAGCAGACAATACTCAACCAAGAAGCCATATTTAAGCAC CAAATTCATGAGCTCCACCGTGTTTACCACAAACAGAGGGAATTGATGGATGAAGTTAAAAGGAATGAAGTATACAAACA TAATTTAAGATTGGAGGCACCACGGTCAAGTTCCGCTTTGTCATCTGAAAACACTCAAAAGATGTTTTGCTTGCCAAGCC TGCCCTGGCCAACTGCTCAATCTTCTGTTTTAATTGCTGATAGTGTCGAGTTGCTGAAAGGAAAAAGCAGACAAATATGT TCTGCGCCTGCTCCTGCTTATGCTTCAGCTGAAACTGATGAATCTTTAAAAGACTATAACCTACCAGAGTCCAAGTACAG AAAAGTTGGCAAGAAGTTATTGGATCTTCGACTTCCTGCTGATGAGTACATTAGTACTGAAGAAGATGAAGAAAATGGAA GGGTTACTGAAGTGCCCCAGGTTTCAGCTTATTCTTTGACTGGAACTTCTCAGGCTGTCCGTGACAGTCATGACAAATCA TATGGAACTAATTCTAGAGGTTTTTCTGACTTAAATGTACCTTTTAAGCCTGAAGAAGCACCAGCTGCAAAGTCTTATGA TTTGGGAGGGCCTACACACCAATGGAACAATCCCTTCTATGATCCGTCAAGAACAAAATTTGGATCTCAAAATTTGCCGA ATGATGTCATCCAGAACTTGAGAAAGAGATCGTATCTCGAAGCTTGCTCAGATAACCCACTACTAGTACCACTCCGTGAG AACAAAAATGAGTGGCTGTCCTCAGGGCAAAGTGGTGGTTTATTGGATTCTTTTGCCAAAGATCAAATCAACCGTGGACC TTGGATAGAGAGAATATTTTCTAGCAGTGAGAGCTCTGCACAAACTCAAGGTCCCAACAGAAATGGCTTGTTTGGACCAA GCAGTGCATCGCATACATGTGCTCTACCGCAGCTTGTTTCTGGGGCTGACATGATAAGTTCTGAGATTTCACCAACACAA TTATGGAAAACACCTAGCCAACTAGCAGTTCAAGCATCTTCTGCATCATCTGCATCATCAGGTCAAATTTCTAAATCATT TATGGGAATTTCTGGGTTCACTGGAGTTGACCTTTATCAGGGTACAAATGTTAAATCTGGCGCTGATTTAGAAAGCAAAA ACTGTCTTCTGAGCTGCTTTGACGTCAGGTCCAAGCCGTTGGATCTTCCCTCTGTGAGTACTAATGATCTAAACAACTGT GACAACCATGGTTCATTAGATCACCATGAGCTTAGAAAGTGCGCTGAGGGTACCAAAGATGTAGGGACTCCCAAGAACCT AAACCTTAATATGATGCCTGCTGGTTGTTCTGATTCAACAGCATTTCAAAGCATTCAGATAGCAGTTGAAGAAAATAAAT CTCAGGATTCATCAAGGGGGTTGAGTTGGCTCAAGGAAAAACCTAAAGGCGAAGGAAAACCCAATGAAGAGAATAAAATC TCTACCCAAATTGAAGTCTTCCAGAGCCAATCCAAAGATCAAAGTATTGAACAAATTGAGAAAGGCTGCATTTCTGATGA CAAGTCACCCTGTATTGAAGTGCCTGACTTCGGGAAACAGATTCCTTCTGGTGAGCATTTGATAAAGAATGATCAGAAGA AACATGAATCTTTCGCAGGTCTGATTGACCTAAATTCAAGCATTGTAGAGGATGAGAATATGCCAATTGAAGTTGATTCT CATGCACCTGCAAGTCCAGAGAACAAGGAATGCTTGCCACCCAGAGGAGAATCTGAAGAAAACCTGCTTGAGATGCAGTC CCAATTGACAGAACAAGAGGCTCCAGAGGCGCAAGAAGAGAAGCAAATCAGAATCGCAGCAGAAGCTTTGGTTTCTATAT CAGGACTTGGGGCCCACAAAGATCTCCACATGACAACTTTTTCATCATCTGAACCTTTTTTGGGCAGTCCTCTTCACTGG TTTGCTGGCATTGTTTCCGCCACAGTGGATCATCCTGATCCTGAGAAAGAAACCGAGGTGGATGCCAGTGATAAGGCTAA TGATCTTGAGGGGCTTCTGCCTGCTAAAATGGATTACTTTGAGTTCATGACCTTAAAGTTGGCTGAGACAGAGGTAGAAG ATTTCTGCTGTAAGAGTAAGGACCTAACTGAGCAAGTAGGTGCATCATCAACTCCACCCACACAGCTGAGGAAAGGGAGC CGGACTAATCGGGGCAGAGGGCGGCGGCGGAAGGACTTCCAAAGTGAAATCCTCCCAAGCCTTGCTTCTTTGTCTAGGCA TGAGGTGACTGAGGATCTTCAGATGATTGGAGGTCTTGTAGGTTCTGCTGGTACTCACTCAGAGGCTGGTTCTCAAAGAA GTGCAGGTAGAAATGCATTGGGTAAGGGAAGGAGAAGATCCTGCACTTCAACCTCTAACATCACAGACTTGCTGTTGACC TTGAAACAGCCAACTAGTTCTTCTAAATTGGGCATTGAGAAAAGAGGCCTAGTTAGTTGGGGAAAGATATGTAAGAAGCC AAGGGGAAAGAGGCTTCCTACTTCTAATCCCAAGTTTCTTTTGAGGCAAAGTATATAA
Protein sequence (LotjaGi4g1v0252500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALLDANVPCNDYFPGHYSTKDVTLDPEGSTWTSSNVNIELRNDRHQMGSFPVSSPCTPLDYNKELLKQTILNQEAIFKH QIHELHRVYHKQRELMDEVKRNEVYKHNLRLEAPRSSSALSSENTQKMFCLPSLPWPTAQSSVLIADSVELLKGKSRQIC SAPAPAYASAETDESLKDYNLPESKYRKVGKKLLDLRLPADEYISTEEDEENGRVTEVPQVSAYSLTGTSQAVRDSHDKS YGTNSRGFSDLNVPFKPEEAPAAKSYDLGGPTHQWNNPFYDPSRTKFGSQNLPNDVIQNLRKRSYLEACSDNPLLVPLRE NKNEWLSSGQSGGLLDSFAKDQINRGPWIERIFSSSESSAQTQGPNRNGLFGPSSASHTCALPQLVSGADMISSEISPTQ LWKTPSQLAVQASSASSASSGQISKSFMGISGFTGVDLYQGTNVKSGADLESKNCLLSCFDVRSKPLDLPSVSTNDLNNC DNHGSLDHHELRKCAEGTKDVGTPKNLNLNMMPAGCSDSTAFQSIQIAVEENKSQDSSRGLSWLKEKPKGEGKPNEENKI STQIEVFQSQSKDQSIEQIEKGCISDDKSPCIEVPDFGKQIPSGEHLIKNDQKKHESFAGLIDLNSSIVEDENMPIEVDS HAPASPENKECLPPRGESEENLLEMQSQLTEQEAPEAQEEKQIRIAAEALVSISGLGAHKDLHMTTFSSSEPFLGSPLHW FAGIVSATVDHPDPEKETEVDASDKANDLEGLLPAKMDYFEFMTLKLAETEVEDFCCKSKDLTEQVGASSTPPTQLRKGS RTNRGRGRRRKDFQSEILPSLASLSRHEVTEDLQMIGGLVGSAGTHSEAGSQRSAGRNALGKGRRRSCTSTSNITDLLLT LKQPTSSSKLGIEKRGLVSWGKICKKPRGKRLPTSNPKFLLRQSI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 921 | 919 | 3.1E-243 | – | |
| PANTHER | 3 | 921 | 919 | 3.1E-243 | – | |
| Pfam | 172 | 327 | 156 | 2.4E-10 | ||
| MobiDBLite | 227 | 252 | 26 | - | – | |
| MobiDBLite | 227 | 250 | 24 | - | – | |
| Pfam | 338 | 573 | 236 | 1.4E-8 | ||
| MobiDBLite | 531 | 557 | 27 | - | – | |
| MobiDBLite | 540 | 557 | 18 | - | – | |
| Pfam | 555 | 913 | 359 | 4.5E-68 | ||
| MobiDBLite | 638 | 679 | 42 | - | – | |
| MobiDBLite | 784 | 814 | 31 | - | – | |
| MobiDBLite | 784 | 800 | 17 | - | – | |
| MobiDBLite | 843 | 868 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0252500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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