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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0257100 |
| Transcript ID | LotjaGi4g1v0257100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | movement protein binding protein 2C; TAIR: AT5G08120.1 movement protein binding protein 2C; Swiss-Prot: sp|Q8JHV6|LAMB4_DANRE Laminin subunit beta-4; TrEMBL-Plants: tr|A0A151SPH1|A0A151SPH1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0257100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:61205326..61209469) extracted from Lotus japonicus Gifu genome v1.2.
AAATGGGTCATTTTTCAAAGTGCAGTCTTCTTCTTCTCCTCAGTCATCAGAGTCTCATCTCATCTTCCATCTCACTCTTC TTCTTCTTCTCACCCAAACCACCGTGCCCGATCTTCCCGGCGACAGAGAAAAATGCAGCATTTCGTGGATTCGGGTGGCT TCGCCGACCCAAGCTCCGCCGCCGCTAACGCCAATTTGGATCGCGTCCTCTTCAACGACCTCGTCGAAATTGTCCCTCTC GTTCAATCCCTCATCGTAAGTAACATTGAATGCTGGTGAATCCGAAAACTAGAGCTAGTTAGACTCATTTCCCCCCTTTT GCATTTGATGGGGTCATGGGTCTTGAATTTCAATGTCAAATTTTCTGAATTCTGTTGTTTATTCAGGATCAGGATCGTAA AGCAAGCCGTTCATTCACTCGGCGTGGTTCCATGGTTTACACCAAGACACCAACTAGAGAAGCTTTGTTTAAAAGAGTAA GACAGTGCCTCCTTTTCCACCTTTGTTGATTTGAATTTTTCTCAACTTTTTGTTCATGGTAGGTTTGCTGTATTATCTAA TTTTGAGTCTGTGTTATTGATGTATGATTTTTCCATTTGTGGTTGTATTTATGAATAGTAGCCAAAATTGAAGAACTAAG TTGTTTCCTTCTGAAGCATGGATACCATAAAACCCCTGCTTAGTTCTATGATGATACTACATTGAATACTTTCTATTGCA TCTTAAATGTGTGCTAGACACATGTCATTAGTGATAAATTAAAATCTGGCCATATCTACTTCGGTAAACTATGTGGATGG ATTGGTATATGATGGCTATTCTAGTGAATGCACTCAATGAGTGACATAAGTTCTCTGTGCTTTCTGTTGTCTCTTCAATC ACTTGCTTTGATATAAATTCTCAATATTTTCGGTCCAGTGAAAAGTATCACTGCATTGTTGACTATCCCTTCTTCACATT AATCTCTAGAATATGTCCAATGCCTGTCTGTTATAACCTATTACATACTTATTCACTTAATTAAAACTCTTTGTTTGAAT AGTGAACTTCATTTTGGTGAAACTGTGAGGTACTCCTATAGGTCCAGTTCATTTGATTTTCCCTTGAGACTTGTCTCTGC CTAGGGCGCATGAGGGTTATGCTGCCTCCCTACAAGAGCTGCTTTCTTGAAATATGAACTCTTGTTTTCATTCCGGGGTT TTGACCCTGCATACCACCACGGCTACCCACTCATTGTGAATAATCTTCTTTAATATAAGGCTTTGGGCTGGAAACCCTCA GTAAGATGATTGGCAAGAAGTTCCTTTTGTTTATAATGTGACTCTGCAATGTTACATAAAACGAGTAAAAGATTAATAGG CCCGTTGCTATTACTCTGAAGGTTTAAAATTTTGTTATTCCAACTTTCCACTAAAAAGAATGTAGCAATCAATGGTTTAC AAGAGAAATTCTACTGGTTTTTTATTTGACTAACTTCATATTTTCTGTATCATGTAGCCCAGGTACTTTGTGCTTCATTC TTACTTCAAAATGTTCTAATATATTTTCACAAATAACTGTATGACTTTCTTATGCTAGATTGAACTTCCTCACTATCATT GTTATGGACTTTTTTTCATTTGTACCGTTCAGATATATGGTAATCTTAAATCATTCTTTCAGAAAAAAATAGACCTCTTG TATAACTGTTAAATTTTATGTGCAAATAGCATTATGACTGAAGTTCTTTTCCATGATCATCATACTCAATCATTTACATC CTCTGGTAGGCAACAGATTCAAAAAGCAGGAATACTTCTCAATCTATTCCTGCCAAAAAGAAAAGGGACCCTGAAGATAA AGAACAAGGAAAAAATGGCTGCAATAGTTCTGATGCGGATAGCTTTTCTATGCTTTCTTCTAGAGCTTTGACTTCAGAAA AGGACAGAGAAGAGTTAGCTATATTGAAGGAGCAGGTAGAGGTACTTCAGAAACAATTATGGGAAAAAGGTGAACTTTTA AAGTCGGCAGAAAACTCAAGAGACCAGATGAATGCTTTTAATGCAAAACTTGATGAGCTTAAACACCAGGTTTCAGAAAA GGACTCTTTACTGAAGTATACACAACAACAGCTCTCTGATGCTAAGGTACTGATCTACTTCTGTGTTTTCATTAATAATT TGGCAAAAGTTGCAAAATCATTTACAATTGAGCAGAGTTCATTTTTTTGCAATTTATGAGTAATGATACCTTTGCACTTA ATACATACTATCACAATTCTCTGGAATGTGACAGGCATGGCTTTTGATAGTTGTTGAAAGTTTGATTCTAATTATAATGT ATTTAAGTAATTGTGTATGAAGTGCATGTTGGAAGGTTTCAAATTTTAATGGGTTTAATTTTAACATAGCTTTCTTGTTT TCATTCTACTCAAGATTAGTGTTGTTATCAGCTCTTTTGAATTTTGATTATGGTTTAAAATTTGGAGAGTGACCTGACCA AAGTTGTTAGTATATGTTCCTTTTTGGACTTTATGAAGCCTTAATCTTGATCAGAATGCATAGAAACTTAAATGTTGTGT TCAGATCTTAATACTGTTTTGTCCTATTCTGGAATCTGATGGGTAAAATGGGGGGGGGGGGGGGAGTTTTGAATGTTTGA TTAAGCATTAACAGGTCTCATTTTCCACAGATTAAGCTTGCAGATAAACAAGCTGCATTTGAAAAGATACAATGGGAAAC AATGACATCCAACAAGAAAGTGGAGAAACTCCAAGGCGAGCTAGATTCCATTCAAGCAGATATTTCAACATTCACGTTGT TGCTTGAAAGCTTGACAAAAACTGATACTGTGAAATACACTGATGATTATGACACCAAGCCTTATGATTTCAATCAGCGG GCTGATATTGTAAGTTTATGAATATTCAAATCAATATATGCAGCTTATTTTTGCAAGCATTGCTATATATGACAACGATT TCAATACAACACTATGATTTGGATGATCATCTTGTTTTAAGAGATAACCTCTTATGATTTCAATAACTTGGGCATGCATG CATTCAAATTCAGTGATTTAGCATTTATAGATCCCCTTCATATTTCCTATAACTTCTTTTCTCTCAGGAGATGGCAATCT GTTAAATAAGTGAAACAGTGAATGGCATATTATTGGACTATTCTTGTCTGAATATTGGGTATCATTGTTTCTTTAAGAAC ATAATTGTGTAATTTTGCGGTCGTATCTAATCCTTTCAAATAAACATTTCTGGTTGAACAGGATGATTTGGATGAGATAG AATTGCAGAAAATGGAAGAAGCAAGAAAGGCTTATATTTCTGCGGTTGCTGTTGTCAAGGAAAAACGAGATGAAGAATCT ATTGCTGCTGCTGCCAGTGCTAGGTTACACCTTCAATCATTCATTTTCAAATCCAAAAGTTGTAACCTGTGATTTCAATG GTTTTATTCAACTTGTTTACACGGTAGGTTCTTTAGTCCCAAATTGTAAAGCACTTATCCTGTGTGGGAGAGAGATTTAT TTGTGGTTTGCCATTTCACATAATAAAGCTTGTTCAATGAGGTCTGTTATGCTTGTATGTGTCTGTGTATGCCACCTTTG GTCCCCAAGTTATCTTCTGGTTCATATAGAATAGTCACAATATGAATCTTGTGTTATTTATTATGGGGTCATGGATATTT GTGCTTCTATGTTTTGTATAAATTCTAATGAAAAGTTGAAAACCTGTTCTGTATTTGATATTTGATATATATATGCTCTT CTGTGATGAGAATAATTAAACGCAACTTTGCAGAGTGATCCAGGGTAATAAGTAGCCGTTTGACGTTTTTTCAGGTAACA AGTTGACGGTTACCTATTTTTCTTTAATAAGAGAAATAGCGAGTGCGCTTATAAAGAGTCTTTATGAAAATTGTCAGTTG TAAATTATTAAATGAAAATGTTAATTTTTTTTGTGGGGGTTGTTGGATTAAAATTCTCAACATTTTAGTACATCATGAAC CTCAAATAGCACAATGAAAAAATATTCCCAGATAAGCGTAATTTGAATAATCTGAAATGAGAAAACTGATGAATAAGATA ATATTTGGATATCCGTTGACTTCACTGCTAACATGCGCTTGAAAGTAAAAAATAATAAAACTTT
CDS sequence (LotjaGi4g1v0257100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGCATTTCGTGGATTCGGGTGGCTTCGCCGACCCAAGCTCCGCCGCCGCTAACGCCAATTTGGATCGCGTCCTCTT CAACGACCTCGTCGAAATTGTCCCTCTCGTTCAATCCCTCATCGATCAGGATCGTAAAGCAAGCCGTTCATTCACTCGGC GTGGTTCCATGGTTTACACCAAGACACCAACTAGAGAAGCTTTGTTTAAAAGAGCAACAGATTCAAAAAGCAGGAATACT TCTCAATCTATTCCTGCCAAAAAGAAAAGGGACCCTGAAGATAAAGAACAAGGAAAAAATGGCTGCAATAGTTCTGATGC GGATAGCTTTTCTATGCTTTCTTCTAGAGCTTTGACTTCAGAAAAGGACAGAGAAGAGTTAGCTATATTGAAGGAGCAGG TAGAGGTACTTCAGAAACAATTATGGGAAAAAGGTGAACTTTTAAAGTCGGCAGAAAACTCAAGAGACCAGATGAATGCT TTTAATGCAAAACTTGATGAGCTTAAACACCAGGTTTCAGAAAAGGACTCTTTACTGAAGTATACACAACAACAGCTCTC TGATGCTAAGATTAAGCTTGCAGATAAACAAGCTGCATTTGAAAAGATACAATGGGAAACAATGACATCCAACAAGAAAG TGGAGAAACTCCAAGGCGAGCTAGATTCCATTCAAGCAGATATTTCAACATTCACGTTGTTGCTTGAAAGCTTGACAAAA ACTGATACTGTGAAATACACTGATGATTATGACACCAAGCCTTATGATTTCAATCAGCGGGCTGATATTGATGATTTGGA TGAGATAGAATTGCAGAAAATGGAAGAAGCAAGAAAGGCTTATATTTCTGCGGTTGCTGTTGTCAAGGAAAAACGAGATG AAGAATCTATTGCTGCTGCTGCCAGTGCTAGGTTACACCTTCAATCATTCATTTTCAAATCCAAAAGTTGTAACCTGTGA
Protein sequence (LotjaGi4g1v0257100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQHFVDSGGFADPSSAAANANLDRVLFNDLVEIVPLVQSLIDQDRKASRSFTRRGSMVYTKTPTREALFKRATDSKSRNT SQSIPAKKKRDPEDKEQGKNGCNSSDADSFSMLSSRALTSEKDREELAILKEQVEVLQKQLWEKGELLKSAENSRDQMNA FNAKLDELKHQVSEKDSLLKYTQQQLSDAKIKLADKQAAFEKIQWETMTSNKKVEKLQGELDSIQADISTFTLLLESLTK TDTVKYTDDYDTKPYDFNQRADIDDLDEIELQKMEEARKAYISAVAVVKEKRDEESIAAAASARLHLQSFIFKSKSCNL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 313 | 300 | 1.7E-131 | – | |
| PANTHER | 14 | 313 | 300 | 1.7E-131 | ||
| MobiDBLite | 62 | 108 | 47 | - | – | |
| MobiDBLite | 84 | 101 | 18 | - | – | |
| Coils | 120 | 140 | 21 | - | – | |
| Coils | 151 | 171 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. | ||
| Biological process | Plasmodesmata-mediated intercellular transport | The movement of substances between cells via plasmodesmata. Plasmodesmata is a fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell. |
Expression pattern of LotjaGi4g1v0257100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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