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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0281700 |
| Transcript ID | LotjaGi4g1v0281700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | PLATZ transcription factor family protein; TAIR: AT2G12646.1 PLATZ transcription factor family protein; Swiss-Prot: sp|P0CB19|Y3081_ARATH Uncharacterized protein At3g50808; TrEMBL-Plants: tr|I1MU06|I1MU06_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0281700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:65276863..65279159) extracted from Lotus japonicus Gifu genome v1.2.
TTAATTATTTTTTTCCAATGATGCCCTTATTAATTCTAACTTGTAAAATGTGTCTCATTAATTATTCTCTCTCTTTCTCA CTTTCCAACACTAATAACAAAGGGTAATTTTGGAAGTTTATTTTGATTCAAGACAAATTTAATGCATTTTATCTAGTTTA ACTACATTTCTTAAACTATGTGAATTTTTTTTTTGTTGCTTATAAATAGGACCGGAGGGAGTACTCTTTAATTTATCATC ATTCTCTTCTTGTTATTGATTACACCTCAGGGAGATAGTTGAGAAGCTCTATTGCAACTGATTCTATGATCATGGTTTGA ATTCCCATCAATTTTAACTCTTTCTATTGAAATTCTCATTGATAAGGGATTACCCTTTTGGTTCAATTGACTTAATAGGA TTGTTTTGATATAGGGATATCAAAAGCCTGCATGGTTGGAAGCTCTATACACAGAAAAGTTCTTTGTGGGGTGCTGTTAC CATGAGAATGCAAAAAAGAATGAGAAGAATGTGTGCTGCTTAGATTGCTGCACAAGCATTTGTCCTCACTGCCTGCCTTC TCATCGCTACCACAGGCTTCTTCAGGTTCGGCGTTACGTTTATCATGATGTTGTCAGATTGGAAGATCTTCAGAAACTCA TAGACTGCTCCAATGTTCAGGTAAATAAAGAAACACTCGTGATGGTGATTATGATCAGTTATTTCCTATTCATTTTTTTT AACACAATTCAACTTGATATGGTTTTCTGATTCAAAAGGCTTTGAATTCTGTTTATTATTAGGCCTATACCATCAATAGT GCTAAAGTGGTGTTCATCAAGAAGAGACCTCAAAACCGCCAATTCAAAGGGTCAGGAAACTACTGCACTTCCTGTGATAG AAGTCTCCAAGAACCTTTCATCCATTGCTCTCTAGGATGCAAGGTACATACATGCACATCTTAATTGGGCAATTCTATAC TGATCAATCTATGCAACTCTCTACTGATCAATCTATGAAGAATGCTTTTACTACTAATTACCTTATGTGTTAAAATTAAT TTTTAGAGAAAATCTTTTAACTTGTGAACCGGATTTTCTAAGTCCATGGTAGATAAAACCATCTTAATTAACAATCAAAA TTCACTCCAGTGTGCTAGGGAAGGTTTATGCAGAGAGAATTATGGATTCAAACAGATTGTTCTTCAGGAATATAGAGGAA TATGTAGCAAATTCACTTGTATTTACTTACACACATTGATTACAATTGAATTGATCAAATTGACTTGACTTCAACACACT AAATTGTGTGTTTGGTTATGCTGTAAACAGACTTTCATCATACTATAAGTTGCGTTCAATTTTTGTCTCAAGGTGAATGT CAACATTCGTGTATACTAGTTTTGATAGATATCCAAACATAACCTACGTACTTAATTACCCACCTACATGATACTTGAAT TATATAGTTAGAATGATTCTGCACACAAAATCTACTCACATAAATTTTTCCTCAAAATTGAGTTTGTCTTTTATTAATTG TGGTAGGATTTCCAAACATATTATAAGTAATAGCTAATTAGTTTGATTTTCAATGGTATAGGTGGATTTTGTGCTGAAAC ACTGCAAGGACCTCACTCCATACTTGAGGACATGCAACTCCCTTCAACTAAGCCCTGACTACCTAATCCCACAAGACATG GGGGATGAAGAGATGACTAATTCAACAGTTGTTGATTGTGATGAGCCAATGAGTTCATCTTCAGGATCAGAGAACATGAG CATGGCTTGCACTGAGATTGTGAGGAAGAGGAGGAGTGGATGGAGTGTGTGTGCAAAATTCATGACCAAAACCAATAGCT ATAAGGTTTCAGATGAAGACATGGCCACAAGCATGAGTAGAAGAAAAGGCATCCCTCATAGATCTCCTCTGTGTTAGTTA ATTTTTTTTGCTTTACACCACCAATGAATAAACACAGCCCCCAACAAAAGAGAGGGACAAAGAAAAAAATGAAAGAAAGA AAGGATTACTAGCAGTTTTTTTATTTTATTTTACTACTTAAAATTTTTAATAATTTTTTAATTGCTGTGACATGATAATT TTGACTGGAGGGAATTGTTCAATGTCCTCTGTCTCTCGAAGTTGAAGTTTTTTGTTAAATTAATCACTTGGTCGGGGGTT TTGTCTTAATGGCATCACGTGATTCCCAATTCCAAGTTATGGTCTGTACATTTATTTAGTAGTTTTATATGTATACAACA ACTATATCATGATAATTAATTATTCTTAAATCCTAGTCAAGAATCCTGCTTTTGACT
CDS sequence (LotjaGi4g1v0281700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCATGGGATATCAAAAGCCTGCATGGTTGGAAGCTCTATACACAGAAAAGTTCTTTGTGGGGTGCTGTTACCATGA GAATGCAAAAAAGAATGAGAAGAATGTGTGCTGCTTAGATTGCTGCACAAGCATTTGTCCTCACTGCCTGCCTTCTCATC GCTACCACAGGCTTCTTCAGGTTCGGCGTTACGTTTATCATGATGTTGTCAGATTGGAAGATCTTCAGAAACTCATAGAC TGCTCCAATGTTCAGGCCTATACCATCAATAGTGCTAAAGTGGTGTTCATCAAGAAGAGACCTCAAAACCGCCAATTCAA AGGGTCAGGAAACTACTGCACTTCCTGTGATAGAAGTCTCCAAGAACCTTTCATCCATTGCTCTCTAGGATGCAAGGTGG ATTTTGTGCTGAAACACTGCAAGGACCTCACTCCATACTTGAGGACATGCAACTCCCTTCAACTAAGCCCTGACTACCTA ATCCCACAAGACATGGGGGATGAAGAGATGACTAATTCAACAGTTGTTGATTGTGATGAGCCAATGAGTTCATCTTCAGG ATCAGAGAACATGAGCATGGCTTGCACTGAGATTGTGAGGAAGAGGAGGAGTGGATGGAGTGTGTGTGCAAAATTCATGA CCAAAACCAATAGCTATAAGGTTTCAGATGAAGACATGGCCACAAGCATGAGTAGAAGAAAAGGCATCCCTCATAGATCT CCTCTGTGTTAG
Protein sequence (LotjaGi4g1v0281700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIMGYQKPAWLEALYTEKFFVGCCYHENAKKNEKNVCCLDCCTSICPHCLPSHRYHRLLQVRRYVYHDVVRLEDLQKLID CSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHCKDLTPYLRTCNSLQLSPDYL IPQDMGDEEMTNSTVVDCDEPMSSSSGSENMSMACTEIVRKRRSGWSVCAKFMTKTNSYKVSDEDMATSMSRRKGIPHRS PLC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 243 | 243 | 6.3E-141 | – | |
| PANTHER | 1 | 243 | 243 | 6.3E-141 | – | |
| Pfam | 62 | 133 | 72 | 3.0E-25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0281700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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