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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0289900 |
| Transcript ID | LotjaGi4g1v0289900.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | QWRF motif protein (DUF566); TAIR: AT4G30710.1 QWRF motif protein (DUF566); Swiss-Prot: sp|Q9SUH5|AUG8_ARATH AUGMIN subunit 8; TrEMBL-Plants: tr|V7C9P3|V7C9P3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0289900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:66216776..66223009) extracted from Lotus japonicus Gifu genome v1.2.
CGCCGAATCATCATTTTCACTCTTTCTTTTTTTAATTCTCTTCCTCGCTTTCTCGTTATCACCTTCAACTTCAAAATCAC GAAACTGCCATCGCCGGCGAAACTCCGTCTCCGGCAACCGTCATTCGAATCTGAATTCTCTCGCCGCTTCGTTGTTCCAT TGTTCCGTTCATCGGAGGAGCTTCTTCATCAGTAGAAGGTGAGAAATTCATTGTAATTTGCGTTCTGATTTTTAATTTTT TTAAATTTTAGCTCGGTTTTGAATTTTGATCAATTCGTTTCTGATCAAGTTTTATGCTCTGGTAATTATATTGAGAATTC GATAGATTTTCAAATTTCTTTGTTGATTGAGCGAAGATTAAGAAGAGCTTGGGATTTGGGAATAAAAATTCAGTGTATAA CTCTCTCTGTATTGATTCTGTTTCTGTGTGATTCATTCACGAGCTGTGAGAAAACTTGAACCTGTCTTCTTTGAGAGAGA CATGAACCTGCCAATCCAGACATCTGTCATGGATCTCTGTTTCAAAATGGAACCCTATGTTTCTTGCCATATTTTCAGGT AAGAAACTTTTCCCTCTTTCCTTCCTTCCGTCAAACTAGTCTCCTCCCAAATAATTTAGTTTATCTTTTTTTTCATTGAT GGTAAAACTAGAGTAAATCCTAGGTGAGTAGCTTTCGAGTTTCATAATTGATTCTAGAAAAAATGTTCGGTCGTGAGAAT TTTGAGCAGAGTCTCTCAAGGCCGCGGCGGTGGATCACGACGGAATGAAGCGGTTGATGTCCCTAGGTTACGACAGAGCT CCAGGTTCCATTGCAAATGGGATACATGTAGAAGAACGCTCAAGTCAGTGCAAGGGTTGAGAGAGAATCTCAAACTCAGT AAGAATTTAAGTGTAAATGATAAGAATGAATAACATGTTATGTAAATGAAAGACAAAACATGTATTTATAGGCCGATACT CGTGGCAGTTGTCTCTGCAAGTGTGAGGAATGCCCTTTAAGTTAGACTTTCGAGCGGGTGGACTACCTTTGATCGTTCGG TCTGGCCTCAATTCATTTTGTTTCGGTCTTCACATGACTAAGCGGACACTGAACAAGAGGGACGTTTCTCCGTGAGTCAT TCAATCTGACCTTATAACAAATGTTTTTTTACACATGCTTTTTGGTCGGATGAGATGTTCTGAAGTCGGGTAGTTTAGAA GCTGGCCTAAAAAGAAAGAAGCTGAACTAAACACCAAACACGATATTAGGCTAGTAAAAATCTATTTACCACTCTTGATT TTCTTTTTCTTTTATTTTTATTTGTTGCAGTTTGCAGCAATCGATGTCTCAGAATCATGTTAGGTTTGCACAATAGAATA GTTTTTATTATAGGGATGGGCAATGATCGTCCCTGCACGTGGACCTCCTTGTCTTTTTCACTCTTCTCAAACAACAATAA CACTAGCGAGTTCAAACCTCCACCTTCAATTAAATTCAGAAAGTATATAATATTATTGTCCATAGCATACAAACAAAAGA CATAATTTGCAGGCCTCATTGAAAATTCTGTCTGCAAATTTTGGGATAGGAAATTCATATAGCAGTTACCATATGGTAAT TCATTTGGCTATTCATTGGTAAAGTTTAACTTGTGTGTGTGTGTGAGACTGCATGCTTTTGGTAAAGAGAGACATTAGAT ACTTTATTTATTTAATTTGTTGTGCAAGTTATGGTATCACTTTCAGTGAATTCCCTTTCATGAAAAGGAGTTGAGAGAGA AGAAGGAATAGGACAGGGTGGGTTTATGTGGAGTGAACCCATTGCCAGCCCACTAGACCATGGCATTCCCGTGAGAGAGA CAAAAGGGGGAAAATTAAAGGCTCTCTTACCCTACGCATTTCCTCTCTCTTATCCCTCCCTCCATTATTCCATTGCACTT CCCAGTATCCCCAATTTCCAAGAGGGGACCCTCTTTACCCTGTAATTGAACCTTTTTTTGTTCTTTTCAGTTAAACTGTA AGCAACGTTTAATGATAAAAGTCATAAAACCTTAAAGTTACGTTAAGACAGTTTCCGCAAGTTTCTCTCATCCATTACAC CAAATGTTGTTTTTCCTCTCCATATTCTTCTTGCTGTGTCCTGATCTTGTTGTATTTTGGCATGAGAATACCCACTTGTG TTCAGTTCACTGCCCTTGATTCTTAAATTCCTTCTTCAACAGATCTGAGTCTCTGTAAAGACGTGTGCTTTTTCTCTTTT GAATGGGCTTATTATCTGGTTTTCTTTTCTTTCCCAGTCTGTAGCATCTTACTTTATTTTCATTTATGGCAGATTTATTG CTGGGAAAAGGATCTTCTTTCTGGATAATCTGTGCTGTTTATTTATTGCACTGAATGCGGGATATGTCATTACTAAAGCT GCTAAATTTGGTTTAGTTTTATGAAAGCTTCCATCAATGTGGTCTAATTTGGATAGAGTGGATGGATGCAAATGAATCAG AGCAAGCATTTAGCAAACACAGAACTGTGGAGAGCTCAAGACGGCCCTTGGTTCCGGCCGAAAAGAACAATGCAATCACC ACCCGGCGATTGGGAACAAGGGAGGTTAGTTCCCGGTACAAGTCACCTACTCCGGCGGCAACTCCATCAGGTCCTCGTCG ATGCGCTTCTCCAAACACAAGAACAACGCCTGTGTCACCCAAATTGTTACCAAAAAGAGCTCAATCAACAGAGAGGAAAC GGCCTGCAACTCCTCCTTCGCCACCAAGTCCTTCAACACCTGTCCACGACTCAGCTGTGGATGTGCATTTATCATCTAGA AGGACAGCTGGTAATCGTTTACCTGATAGTCTTTGGCCTTCCACAATGCGAAGTTTGAGCGTTTCTTTTCAGTCAGATAC CATTTCCATACCTGTTAGCAAGAAAGAGAAGCCAGTTACTACTGCTTCTGATCGTACTTTGCGACCGACTTCAAACTTCG CACACAAGCATGTTGAAACACCAAACGCGCAAAAGCTTACACCGGAGAGAAAGAGGAGTCCTCTTAAAGGGAAGAATGCC CTTGATCAGTCTGAGAATTCAAAACCAGTTGATAGTTTGCACTCTCGACTAAAAGATCAGCATCGTTGGCCAAGTAGAAT TGGTGGGAAGTTATCTTCTAATACATCAAATCAAAATTTTGACCATGCTGATAAGATAGCCAGAATGATGAACACTTCTG CTCCTGGAACTGGTGTATCTTCACTGAGAAGATTGTCTTTTCCAGCTGAAACTAATACGCCTGTGCAAAAAACTTCTAGC GATGCTGCAAGGCTATCATTTCTCCTTCAAAGTGGTAGAATAGGAAGCCAAGTAAAATCAATTGATGACAGCTTCCATGT ATTAAAACCTCACAAATCTGTTTCTGGGCCTCTATCAAATAAAACAGGATTAGCAGTGGCTGGAGTCAGATCTCAACCGG GATCGCGTCTCCCTTCACCCAGTAAGATCTCAGTGCCATCCTCTTCTAGTTCAAGAGGTGTCAGCCCATGTAGGTCAAGG CCATCAACTCCTCCCAGAGGGATTAGTCCATCTCGAATAAGGTCAACCAATCCATCCGACCAGCCCAACAATTCAATTTC AGTGCTCAGCTTTATTGCTGACATAAAAAAGGGGAAAAAGGGTGCAGCCCAGATAGAAGATGCTCACCAATTACGACTTC TATACAATAGATATTTGCAATGGAGATTTGTAAATGCGAGAGCAGAGGATGTATTTTACATCCAAAATGCAACTGTGGAG GTATGACTTTATATCTTTGAACAAGCTGGCAGTCTCTTTTTAGTGTAGTTCTTCTAGTGTACAGAAGATTCTGAAGATTA AATCATTTGCCTAGATCATTTTATAAGAACTTGTTCAATGGTGCAGAATACTCTGTATAATGTATGGGAGACTACTTTGT CTATGAGGGAATCGATTATTAGGAAGAGGATCAATCTCCAGCAGCTGCAGCTTGAGCTGAAGCTGGAGTCCATTTTGAAT GATCAAGTAATACTTCTATCTTAACTGAAATATTTATCATTCATTCATTCTATATGTCATCTTTTATTGTTGAGGGTGCT CTTCAGTTACCCCCGACCCCTTTTTTGGATTTAAATAAATATAGTTTTTCGGAGTTTATATGTAACACAAATATACTTCC CAAGAGATTGGACATATATATTGAAAAGTTGTTTATGTTAGCCTCTGATAATAGGTTTTTTATAACTCATATTAATTGTT GATATAAGTTATTATAAGTAAATGAAAAATAAAAAATGAAAAGCTCAGGACTCAGTTTTTTCAAGTTGGAACTTTAGAAG GATGGATATGGTGGTATTGGTATTTGGTATACATAGAACATCTGACCTTTTGGAAGTTGTTTCCATTGTGATATAGATTA CAGTTTGAAAAAACTTTTTCATCTAGAAAATACTGATGATATTCATGAAATCTTATATGAAGTTGAGGTTCTATTTTTAC TTCTTATAACTATGTAGTGAAACATTTTTCAAATGTGGTCCTTTTATGATTACTGAAGCAGATGACCTACCTGGATGACT GGGCTGTAATTGAAACTGATCATGTTGATGCTCTATCTGGGGCTATAGAAGACTTAGAGGCCAGCACTCTTCGTCTTCCA CTAACTGGAGGGGCGAAGGTATGTTTGGTTTATATATGTCTTTTGCCTTGATACCTGGAAAGAGACACTGACATCATTAC TATGTTTACACTTTTACAGGCAGATAGTGAGCATTTGAAGGCTGCTATCTGTTCAGCTGTTGATGTTATGCAAGCAACAG GATCTGCAATCTACCCTTTTCTCTCACGGGTGAGTTAATTGTTTAAGATTTCTGCTGGCGATTCGCTGATCAGCTAGCAC TTGTCTATCCTGCTATTCCTAGGTTAACACATTTAGTAGCAAACTATTTTTTTCTCTGATTGCAAGTTTTTCTTCCTTTT GATTTTCCAAATTAGTACTACTATTTAGGATTCATTGGTAAAGGGTTACCATATTTTTATGTATCATTTTTACATCAAAT GCTATGAGAGGCTGACACCATGTTACTTTTTCTATCCCATAGGTGAAGGACATGAATAATTTAGTTTCTGAAGTTGCTGT TGTATCAGCACATGAGAAAGCTATGCTTGAAGAATGTGAAGCGCAACTTACTGTTGCAACAGCTATGCAGGTCAGAGTCA CTATATAGTGTTTAAGAACTTGAACTATGTCCAAAACATTTCTCAATGTAATGTTGAAGACGAGCATTGATTGATGATGT CTGTGTAGTGTACTGCACTGATTTGTATATTTGCAGGCTTCATATTACATGTCTGTTTCCTAATGTGGCCTAGTTGGATT GCGCTTTTCATGTTAGTTGACATAGTTGCATTCATTGAGCTTTTTACCTCATTTGGTTGTCTGATAAATTTAGGTCCAGA CCTTTTTCATTTTAAAATTGGCTACTCTGAATAAGTTAATACGGTTTTGAGTCATCTTAGGAGGCTGGTTGTTTTTATTT TCATTTGTTTCAACTTTCAATCAAGAACATCTATTGTATAAGAGGGTGAGGAGCATCCTTTCAAGTTTCAACACTAGGGC TTGATCACTCCCTTAAGTAAGACAGATTGAAATAAATTAAGCATACATAAATTTGTTCGTCTTCAATTGATGGATGAGTT GAATGGAATGTGCTTCATCATCATCCTTGTTTTAGTTTCCAATTTATTTGTTTTTTTGGTGGAAACAGGTGGAGGAATCT AGCCTTCGGACCCATCTCATGCAGACCAAGCAAGCTTTGGAGAATAAGTAACCAACCTCGGAAATTTAGACACCTTGAGC CTGACCTGTTTCCAAGCTAACAACAAGTCTCTAGAAGCTGCAGCCAAAGTGATAGTATTAGTAAATTAAATTGTTTTTCA GGTTCTTTACCTTTGTAAATTTTTTAATTAGGTTATTTTCCCCCCTTTCCTCAAATATGGCTCTTGTTCAATTACCTTCT TAGTTTCTTTTTAGTCAAAACTGGTGGCCCAAGCCTTCCACTTGTAATTTTGTATCATGCAGATGAAAAGTAAATGCAAA GCAATACAGAGAAATAGTAACACCTATCCACATTTATCATTTGCATTTATTTGAATGACAGTAAAGCAGAACATGCCTCA TTGCAGGCAATCTGAATGACAATAAAGCAGCGTCTGAGAAACATTGCCCCACTCCCTTTATCCCTAAAACAGAG
CDS sequence (LotjaGi4g1v0289900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGCAAATGAATCAGAGCAAGCATTTAGCAAACACAGAACTGTGGAGAGCTCAAGACGGCCCTTGGTTCCGGCCGA AAAGAACAATGCAATCACCACCCGGCGATTGGGAACAAGGGAGGTTAGTTCCCGGTACAAGTCACCTACTCCGGCGGCAA CTCCATCAGGTCCTCGTCGATGCGCTTCTCCAAACACAAGAACAACGCCTGTGTCACCCAAATTGTTACCAAAAAGAGCT CAATCAACAGAGAGGAAACGGCCTGCAACTCCTCCTTCGCCACCAAGTCCTTCAACACCTGTCCACGACTCAGCTGTGGA TGTGCATTTATCATCTAGAAGGACAGCTGGTAATCGTTTACCTGATAGTCTTTGGCCTTCCACAATGCGAAGTTTGAGCG TTTCTTTTCAGTCAGATACCATTTCCATACCTGTTAGCAAGAAAGAGAAGCCAGTTACTACTGCTTCTGATCGTACTTTG CGACCGACTTCAAACTTCGCACACAAGCATGTTGAAACACCAAACGCGCAAAAGCTTACACCGGAGAGAAAGAGGAGTCC TCTTAAAGGGAAGAATGCCCTTGATCAGTCTGAGAATTCAAAACCAGTTGATAGTTTGCACTCTCGACTAAAAGATCAGC ATCGTTGGCCAAGTAGAATTGGTGGGAAGTTATCTTCTAATACATCAAATCAAAATTTTGACCATGCTGATAAGATAGCC AGAATGATGAACACTTCTGCTCCTGGAACTGGTGTATCTTCACTGAGAAGATTGTCTTTTCCAGCTGAAACTAATACGCC TGTGCAAAAAACTTCTAGCGATGCTGCAAGGCTATCATTTCTCCTTCAAAGTGGTAGAATAGGAAGCCAAGTAAAATCAA TTGATGACAGCTTCCATGTATTAAAACCTCACAAATCTGTTTCTGGGCCTCTATCAAATAAAACAGGATTAGCAGTGGCT GGAGTCAGATCTCAACCGGGATCGCGTCTCCCTTCACCCAGTAAGATCTCAGTGCCATCCTCTTCTAGTTCAAGAGGTGT CAGCCCATGTAGGTCAAGGCCATCAACTCCTCCCAGAGGGATTAGTCCATCTCGAATAAGGTCAACCAATCCATCCGACC AGCCCAACAATTCAATTTCAGTGCTCAGCTTTATTGCTGACATAAAAAAGGGGAAAAAGGGTGCAGCCCAGATAGAAGAT GCTCACCAATTACGACTTCTATACAATAGATATTTGCAATGGAGATTTGTAAATGCGAGAGCAGAGGATGTATTTTACAT CCAAAATGCAACTGTGGAGAATACTCTGTATAATGTATGGGAGACTACTTTGTCTATGAGGGAATCGATTATTAGGAAGA GGATCAATCTCCAGCAGCTGCAGCTTGAGCTGAAGCTGGAGTCCATTTTGAATGATCAAATGACCTACCTGGATGACTGG GCTGTAATTGAAACTGATCATGTTGATGCTCTATCTGGGGCTATAGAAGACTTAGAGGCCAGCACTCTTCGTCTTCCACT AACTGGAGGGGCGAAGGCAGATAGTGAGCATTTGAAGGCTGCTATCTGTTCAGCTGTTGATGTTATGCAAGCAACAGGAT CTGCAATCTACCCTTTTCTCTCACGGGTGAAGGACATGAATAATTTAGTTTCTGAAGTTGCTGTTGTATCAGCACATGAG AAAGCTATGCTTGAAGAATGTGAAGCGCAACTTACTGTTGCAACAGCTATGCAGGTGGAGGAATCTAGCCTTCGGACCCA TCTCATGCAGACCAAGCAAGCTTTGGAGAATAAGTAA
Protein sequence (LotjaGi4g1v0289900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDANESEQAFSKHRTVESSRRPLVPAEKNNAITTRRLGTREVSSRYKSPTPAATPSGPRRCASPNTRTTPVSPKLLPKRA QSTERKRPATPPSPPSPSTPVHDSAVDVHLSSRRTAGNRLPDSLWPSTMRSLSVSFQSDTISIPVSKKEKPVTTASDRTL RPTSNFAHKHVETPNAQKLTPERKRSPLKGKNALDQSENSKPVDSLHSRLKDQHRWPSRIGGKLSSNTSNQNFDHADKIA RMMNTSAPGTGVSSLRRLSFPAETNTPVQKTSSDAARLSFLLQSGRIGSQVKSIDDSFHVLKPHKSVSGPLSNKTGLAVA GVRSQPGSRLPSPSKISVPSSSSSRGVSPCRSRPSTPPRGISPSRIRSTNPSDQPNNSISVLSFIADIKKGKKGAAQIED AHQLRLLYNRYLQWRFVNARAEDVFYIQNATVENTLYNVWETTLSMRESIIRKRINLQQLQLELKLESILNDQMTYLDDW AVIETDHVDALSGAIEDLEASTLRLPLTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHE KAMLEECEAQLTVATAMQVEESSLRTHLMQTKQALENK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 126 | 126 | - | – | |
| MobiDBLite | 1 | 21 | 21 | - | – | |
| PANTHER | 28 | 597 | 570 | 1.7E-187 | – | |
| PANTHER | 28 | 597 | 570 | 1.7E-187 | – | |
| MobiDBLite | 32 | 51 | 20 | - | – | |
| MobiDBLite | 59 | 76 | 18 | - | – | |
| MobiDBLite | 147 | 231 | 85 | - | – | |
| MobiDBLite | 156 | 171 | 16 | - | – | |
| MobiDBLite | 175 | 191 | 17 | - | – | |
| MobiDBLite | 202 | 218 | 17 | - | – | |
| Pfam | 281 | 565 | 285 | 8.5E-93 | ||
| MobiDBLite | 321 | 375 | 55 | - | – | |
| MobiDBLite | 327 | 375 | 49 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0289900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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