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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0303700 |
| Transcript ID | LotjaGi4g1v0303700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aldose 1-epimerase family protein; TAIR: AT5G57330.1 Galactose mutarotase-like superfamily protein; Swiss-Prot: sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase; TrEMBL-Plants: tr|I3SKH9|I3SKH9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0303700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:67877077..67880966) extracted from Lotus japonicus Gifu genome v1.2.
CGCACATGACATTTTGGGGGAAAATTAGTGGTAAGCAATCCATCCACTAATGTCTGTATCAATAGAAATGCTGTAACATG TGGAGAAAAAGAGTGAGAGAGAAGGAAACAAGAAAGAAATAAGATATTATTTCTTCTGGAAGGGGTGAGTGAGTGAAGAG GTAGCAACAGCCAACAGTTACTATGAGTAGCTACGACTTGCTGAAGGGCATCAATGGCCTCGACAAGATCCTTATTCGCG ATGCGACTGCGACTGCGACTGGTTGCTCCGCCGAGGTCTCTTTCTTCTCTTCCTCCTCCTTCATCCATGCATTTTTGCTT CCATGATTTTTGTGATGTGATTTTCAGGTGTACTTGTACGGTGCTCATGTGACTTCATGGAAGAATGACCATGGGGAGGA GGAGTTGCTTTTTGTCAGTAGTAAGGTACAATATCAAACTCAGTATTTAAGGGCAGGGCTAGTAACAATTGTTTGAATAT AGTCTATCAGTTTGTGATTATGTTTTTGGAAAATTCAACTCCAGTAATGAAGTTCATGATCTTTGATCCATCTTGTTTTA TTAATATAATATTGTGCAGTCCATATTTGATCCTCCAAAGGCAATTCGTGGAGGAATTCCAATATGCTTTCCTCAAGTAA GTACTTCTCATGATAACATTTCTTTTTTGTCATGATAATACTACATAGACTTTTGTCGGGGACCAAGATGTTCCAGTTAA TCAACAAGTCTCTAATAAAAACAATTAACAGTCCAAATAACTGAAACAAATTATAGAAAAGTCAATGGATAGGAAAGTTA GAAACAACTGCATACCTAGCTTTCAGCCGCCAATAGCAGAGCACTAAAGTACCCCTTGAACTGGAAATATGCTATTTGCT TGACCAATACTTTACTAAGCTAATAACTCTCAACATTTACGTTCATTGTTGATGTATGGTTGTGGACAATAACCAAAACA AGGAGATTCTTTACACATGAGCCTTCTAGATTTGGTTCATTCCTCCGTCACACTTAATCTACAATCAATCTAAGACCCTA AATAACAACAAAAACCAATTGAAATTTTGTAACTGAAATTTGTAGAATGTCTTCTGAATTTCTTCGCAATTTGAAAATGC CCTTCCAAAAACAAACAATTTTGTTTTTACAATGAGATCCCAGATTACACATTGACGGAAACTTGCTCTCTGATTGCAGT TTTCAAATCATGGTACACTTCCCTCGCATGGGTTTGCTAGAAACCGGTTCTGGACAATTGACAATGACCCTCCTCCTTTT CCAACAAATGCTTCGGAGACAGCCTTTGTTGATTTGATTCTTAAACCCTCAGAAGATGACATGAAGATTTGGCCTCACAG GTATAGATAATAAAATTTTAAAAGTTTGGCCTATATTTAAGAGCACATTTTATTAACTCATATTTTACTTCCTGATGTTA TTTAACTCTTTTTATTTCATATTTTGAATACTTATATTATATTTCCTCCTGACGTCATATGCCCTTTTTGCATACAGTTT TGAGTTCCGTCGAAGGGTAGCCCTGGGACCTGGAGGAGATCTAATACTGAAATCTCGGATTAGGAACACAAACAACGAAG GGGAGCCATTTTCATTCACTTTTGCTAATCATACATATTTCTCTGTGTCAGATATAAGGTGAGTTCTTGAAATGTGTTTT ATCTCACTTCAATATGAAAGTCTTGATAAATATGGTTATTATTATTTATAAATTTAACTTGTTGTAAAATTTACCTAGTT ACTTTTGGATTTGATTGAAAACCAGTTCAAATCCACATAGTGAACAGCAAATCAAACTATGCTATCTTATCATGTGGGAT GAGCTTGTTTTCACGACATAAATTGTGAAATGTTCCTTGTTAAGATTAGCAATTTTTTTTGTAGATATGAGAATGTGGGG TATTGACTTTTGAATCTCTAAAATTAACTGTGAATTTATGGCTTTTGGTATCTGAAACTGAAAGTGCAGAACGTGATACA AAATTCAGCGTTCCTACATAGAAATAGAAATCATTTGAAATCATAGTTTCTTGAGTTGAGCAGCATGCAAATCCCATGAC TTTGTCCACATACAATTTTAAGTGTGTATTCATAGGCAGAATTTTGTATATCTGTGGATACATGTTGGCATTGTTTGATG ATCCATGCAAGTGACCCCACCAATTAGGAATAGGCTTTTGCTGTCGTATATAGGCAAAAATGTGGCTTTAAATTTATTAA ATATTCAGGTTGATCAAATTTATCAACATTTCTGGTGAAATCAGAATCTTTTGTTGTATGTATTTTGGCTTACTGTCAAT TCACTGATTTATTTATTGTTGTGTTTAGGGCTATACTTGTAGTCTGCAGTTTTGAACTCCATTTAACTAGTTTGTTTGCT TTTATTCAGTGGAGTTCGGGTAGAGGGATTAAAGACACTGGATTATCTTGACAACTTGCAGAAAATGAAACGCTTTACAG AACATGGGGATGCTATAACATTTGCATCAGAAGTAAGACTGGTTTATCCTTTTCTACTTCGTTTTAAAAAGTGCAGATGC TGGTCTTACTATAGATATGGTAATGAAATAAGTAAACTTCTGTAGAATGTAATTTTGGTTTTATTAAGGTCAATTCAACT AACATTGAGGGACATGAATGTAGCCGATCCTGATGTGCTGGGGTTTCATAGGCTTCAGTGAGTGGAAACTGATGCTCTCT TTTCTTTATATGATAGGTTGACAGGATATATCTCAGCACTCCTGCAAAGATTTCAATTCTTGATCATGAGAAAAAGCGAT CATTTGTGTTGCGTAAAGATGGTCTTCCTGATGCTGGTGACTATTATAAGGCTCCTCTTGTGTGCTTAGTTTGTGATATT GATGAATATTACTGGTGGAACAATATTATTTCAAGATATACCATTTAAGAATATAAATTTGAAAAGAATGGAACAGGATG GGGTAAAAAGTCAGGTTTCTTAGTGGAGTATAAGCTTATACTAGTTACCTGTTTTCATCTTCAAATTCTTCCTGTTAACC AAGTACAGTGTTAGATAAACATTTTTCTTACAATAACTTTAACTTTCTGTCCCTCGTTTAAAAAACCTTCAGTTGTACAC ATTTTTAATCTTTGTGTTGCTTTCAGATTTGACATCAGGAGTAATATTCACTAAGTGATTGTTTTCCTATTACTTTCCTC ATTTGTTATTCATCTATGCAGTTGTGTCCTTGGGATAAGAAAGCAAAGTCTATGGCTGATTTTGGTGATGATGAGTATAA GCATATGGTTTGTGTGGAAGCTGCTGCTATTGAAAAACCCATCACTTTGAAACCAGGCGAAGAATGGAATGGAACTCTAG AGCTTTCAACTGTTTGATAGCTTCAATACTAATGTAATGGGATCTCTTCTTCTGTTAAAAAAAGTCCAAAATATCTATTA TCACTTTATCAGACCCCAAGTGGGGATGAAAAACTAAAACTATGTTTGGATATTTTGTTGTATTCTATAATATTCCAAGT ATCAGGATAGTATCACTTGTATGGCTATCCATAGTTTAAGGGATTTACCCCCTATCAAATAAATTGTATTGCCGGATGAT GAATGATAGGCAGAAAATGTGCTTGCTCACAAATTTTTCCTTGGTTCTTCGATTAATTGTTCTTGTTGCATTTATTTTGC TTTGGTGGATAATTTTATCCTACCAACTTGATGCTTTCAACCTTTCATTACTGTTTTTTATGCGTCCTAAATAAGATTCT TGAAGTTAAAAGTTTTTTTCATCAACTTTTTCTCACTATATTATGTAAAGAAAACTCTGCAGATGATTACTTCCTATCAC GATTACCCATTGTTGATTTGCAATTAACCCAAGGAGGAGTTCAATTGCCA
CDS sequence (LotjaGi4g1v0303700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTAGCTACGACTTGCTGAAGGGCATCAATGGCCTCGACAAGATCCTTATTCGCGATGCGACTGCGACTGCGACTGG TTGCTCCGCCGAGGTGTACTTGTACGGTGCTCATGTGACTTCATGGAAGAATGACCATGGGGAGGAGGAGTTGCTTTTTG TCAGTAGTAAGTCCATATTTGATCCTCCAAAGGCAATTCGTGGAGGAATTCCAATATGCTTTCCTCAATTTTCAAATCAT GGTACACTTCCCTCGCATGGGTTTGCTAGAAACCGGTTCTGGACAATTGACAATGACCCTCCTCCTTTTCCAACAAATGC TTCGGAGACAGCCTTTGTTGATTTGATTCTTAAACCCTCAGAAGATGACATGAAGATTTGGCCTCACAGTTTTGAGTTCC GTCGAAGGGTAGCCCTGGGACCTGGAGGAGATCTAATACTGAAATCTCGGATTAGGAACACAAACAACGAAGGGGAGCCA TTTTCATTCACTTTTGCTAATCATACATATTTCTCTGTGTCAGATATAAGTGGAGTTCGGGTAGAGGGATTAAAGACACT GGATTATCTTGACAACTTGCAGAAAATGAAACGCTTTACAGAACATGGGGATGCTATAACATTTGCATCAGAAGTTGACA GGATATATCTCAGCACTCCTGCAAAGATTTCAATTCTTGATCATGAGAAAAAGCGATCATTTGTGTTGCGTAAAGATGGT CTTCCTGATGCTGTTGTGTCCTTGGGATAA
Protein sequence (LotjaGi4g1v0303700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSYDLLKGINGLDKILIRDATATATGCSAEVYLYGAHVTSWKNDHGEEELLFVSSKSIFDPPKAIRGGIPICFPQFSNH GTLPSHGFARNRFWTIDNDPPPFPTNASETAFVDLILKPSEDDMKIWPHSFEFRRRVALGPGGDLILKSRIRNTNNEGEP FSFTFANHTYFSVSDISGVRVEGLKTLDYLDNLQKMKRFTEHGDAITFASEVDRIYLSTPAKISILDHEKKRSFVLRKDG LPDAVVSLG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 246 | 244 | 1.1E-129 | – | |
| PANTHER | 3 | 246 | 244 | 1.1E-129 | – | |
| Gene3D | 8 | 247 | 240 | 4.9E-72 | ||
| SUPERFAMILY | 10 | 246 | 237 | 5.09E-56 | ||
| PIRSF | 15 | 247 | 233 | 1.1E-50 | ||
| Pfam | 25 | 246 | 222 | 3.2E-50 | ||
| CDD | 27 | 246 | 220 | 8.67703E-94 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Isomerase activity | Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi4g1v0303700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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