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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0305800 |
| Transcript ID | LotjaGi4g1v0305800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein CHLOROPLAST IMPORT APPARATUS 2; TAIR: AT5G57180.1 chloroplast import apparatus 2; Swiss-Prot: sp|Q9LU68|CIA2_ARATH Protein CHLOROPLAST IMPORT APPARATUS 2; TrEMBL-Plants: tr|A0A0L9TEZ5|A0A0L9TEZ5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0305800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:68166845..68171215) extracted from Lotus japonicus Gifu genome v1.2.
GAGTGAATTAGTCGGTTGTGGAAATATATTGTACACAAAAAGAAATTAATTGCATAGGTTTGGTCTCCGAAAACCAGTAC ACTTGGGGTTTGCCTAGCACACACAAAATGTAAAAGAAAAATATCTAAGAACTTAACAAGTGAAGGATATTAACGTTCCT TAAAAAAAGGACATTAACGTAAAAGAACAAGGTAGAATAATTGAAGAGGTAAAAGAGAGAAGAAAAAAGAAAGCTAATAA ATGGTCCCCATCAGTCGGAACAGCAGAGAAACTGAGTATTGTCTCTTCCTCCGTTCTCATCCTACACACACTCTGTGCTC CATTCCACTCCACTGCAATACAAGTGATTCAGTCGGTGGGCTTATTCCCTTCTGCCAGTTGCCTATATCTACATCCTCCC AAACAAACCTCTTCCTTTTATCTACTTCGCCCCGTGACCTCTCCATCATCTTATATCTCACTTACTCAAAATCAATCAAT ACTCCTCTGCTCTCTCCTGCTTTCATCTCTTCAATCCCTTCTCATTGGCCACCTTCCCTTTCCCTTCATTCTAGGCAACA CCAATTTTGGTATCTTTTTCAACTCCCAACCAAATGCCCTCTTCTCTTCATAGTCCTAATTCATAAACAACTAGCTAGTT ACACCCTTCCTTCTTGTGTGTGTTACTGTTTTCTGTTCTGTTCTCTAAACCCCTTGGCCTTTTCTTCATTTATTTATATT TTTTTTTAAAACAAAACAACTTTTCCTTCCTTGTTTTCTTTTGGGTTTAGGGTTTTTGTACCTTTTCCCCTGTTCCTCAA TTCTCAGCTAACTTCACTTCACAACCATGTCACTGCAATTCTAGAACAATATACAGTTACAGACATCATTCATTATATGA ATCTAGAAATGTCTTCTTCGTGTTTGAGTGGTGCAGGAGGAAGAGCAACCTACGGATTCGATTTGGATTTTGTTAAATCT CCATCTTCATGGAGCAGAACCTCACAGTCATCTTCTTCACCTTCTTCCACCATCTCTGAATCCAGCAATTCCCAATTAGC AATCGCCACCAGAAAACCCAGAACCCCTCGGAAACGACCCAACCAAACCTACAACGAAGCCGCCGCGCTTCTCTCCACCG CCTACCCCAACCTCTTCTCCACCAAGACCCTCAAACAAACACCGTCACCAACCAATCACAATTTCATCAAGGAAGCATCA GCAGCAGAATCATCGGAATTGCTTTTCCCTTTCAGGGTTTTGGACACGTCGTCATCGTCTTATCTACTTCACGGCCCAAT CCAGCACAACCCACCGCCGCCGGAGCTCAAGGCGGTGGGTGTGGTGCCGGAGAAGCCGTGTCGGAGCCCCGGGGAGATAA GCTCCAGGGTGAATTTACTCGATTTGGTGGAGGATGATTGCGGAGATGATTTCGATGCCGAATCGATTCTCGACGAGGAA ATCGAGGAAGGGACGATTGACAGCATCATGGGAGGGAGGGTTCAGGAGGATTCCGACGGAGCTTCCTGGCAACACCACCC GTGGATTGGATTTGGCGGGAAATTCGATTTCCGGCTAGGGTTTCCGAGGGCTGGAGTCAGGGCTCTCCGCTGCCATGTCG ATGACGGCGATTGGTGGAACTTTCCGCCGGTTGACATCCTCCAGATTTCGCCCAAGATTATCGGCGGCGGTGGAAGCAAA CATCCGCCGGAGAAGAAGAAAAAGAAGAAGGTGGCGGTGGCTGCGGTGGCGGAGAAACCGAAGGTGGAGTTGAACGAAGC GGAATTGCCGAAAGCGAACGCTAGTTTGATGTTGAAACTGAATTACGACGACGTTCGGAGTGCTTGGTCTGGCCGGGGCT CGCCGTTCTCCGATGACAGCCCCGCCTCCGATGCGCCGGGAAATGACGTCACGGTATGTTTCTTAACTCCCATTGGCCAT TGAAAATTCCATCGCTTTATTCTAATTTATTCTCATTAATAATTAAAAATCCATTCAATGCCGTGTTTGGTTGGGGGAGA TTTATGATGAAATAACATTATAACAACTTGTTAACATCAAACAAAGCGTTATTTTTTATTTCCTCCCTTTCAAATTCTCC TGATTAATTAATTTATTAAATTAAATTAAATTAAGTTTTCATTTCAATCTATGGTTGACATTTTTAATCAAGTGGAGTGT GGGAGTCACACTTTTTACACTGAAATAGTAAAGTAGTTCATGTATGTCATGCCTCAATTCCTCTTTACTTTACTTTTCAA GGTCATTTTAAAAAAAAGAAGGAAACATTCTCTCACAATATTTAATGGTTTTCAACTTCAATTGTAATGCCCATAAAAGG TTAAAAGTAAAAAAAAAAAACATATTTGTAGTCAACTTCCAATTTCAATAGCAATTGGTCTTTGCCCCGTCTGAGTTGAG TCAACTTCTTACTTCAAACTGACATTGTAGTGTGGGCTTGTTTAGTTTGTTATTTATTGTCTTTAATTTCATTCATTCAC AAAAAAACCTTCCATTTAAAGTGCTAGTGTTGTGGTGTAGAAAAAAAAACTTTTGGTATTTATAATATGTTTCTTACATA TTGAAAATAATTTAAAATTTTTTTTTTTAATTTATATAACATGTTTTTGTTGAGAGCAAATTGTGTAATTTTAAAGTTTT GTTTTTGTTTTTGGTATGCAGGCACGGCTATCACAAATTGATTTATTGTGGGACAATGGCGGAGTGAGGGAAGCTAGCGT GCTTCGCTACAAAGAGAAGCGACGTACGCGGCTCTTCTCGAAGAAGATCAGATACCAGGTCAGAAAAGTCAACGCAGATC GACGGCCTAGAATGAAGGTACAACCCAGTAGTTGAAGAGTAACAAACACTTGAATTGAAGAGGTTTGATTTTGTGTCAGA AAAGAAAAAGTTATGGGAAATCTAGTTTACGATATGGTTATGATAATCGGATAATGAGATGCGTTGTAGAGTTTTCTTTT TGTTATGGAGAGTGGACCCCACTGTGATGGTTGGTCACCCTGTCCAACTTTTGAGGATCTATCTTATTCAACCACTGCTG AGCAAAGCAATGTTGTTTTGGTTTTCTTTTTCCTTTTTTTATTTCAATTTCAATTTCTTTTTATATTCATCTATTAGTTT GGCCTTTTGAGTTTTGATCCCTACCTATATATTTTATTGATACCTTAGAAGTGTTAGTTGCAGTCACAGTTGTTAATTCA AAGAGTTTAAGAGATATGATATTCACTATGAGTATTTCCGGGTCAATTTTGAAAGTAATTTAACACAAAAAAATTCTCTT GAAGTGAGATTCTCTAATGTTTGAAAATAAAAATATGTCGGTTTTTGTCTACTATATTGTTATGTAACATTTTAAACCTT CAATTTTTAAATTTTTTTGCAATTGGAATTGGAGAGCTCAAGAAATGATGTTAAAAAAATGAAGAAGTTGGAAAATGAGT GTGTTAAATTTGGAATTGGATCACGGAAATTTTCATATGAAACTTGGGGGAAAAAAAAGCAAGAGGGGGGAAAGCGAAAA AGAAAAGGAAGATACACAATGAGAAAATAAAATTGTGGATTATGGGTTGGTTCATTATGTTTGTCACAGTTGAGGTAACA CGTACCTTGTTTGTGATGTGGCAGGGGCGATTTGTTACGAGGCTGAATTCTAGCTCAAATGCACACAGATGATATGAAAA TGTAGGAGCAGTAAAGCACATCCTTTTTTGATACTTCATTTTGAAAAGAAAAAAAGTAAGATACCATATACCATCTTCAG AAGACAATCCCCAATGCTGTAAGAAGCCTAAGACTATCATTATGGAGTCAATTAAGTAAGATCAATTAATAATTGGTCTT CAGACTCACATTTTTGCATAGCTCTGTTCAGAGTTATACCAAGTCCACATTATGGGCCTTGTTCTGGGATAAGAGGTTCT TTGAGGCCAGAAATGACCGTTCCACTGCGATTGGGCACCACATCCCTTCCATTGCCATTAAACCTTATGAGTTATGACTC TTCAAAAGAATAGCCAAATCCTCTGTTGCTACGTTACAAGATTGTGAACCAAATGTAGCAACTTCCTTAAGAGATCGCCA TTTCCCCCAGGCTTCTGAGATTGTAATTGGACTCTCAGTTGCCATACTAATGCAAGATTAGTTTCCCCTTATTTTGTCTT GGAAATGAAAAATGTCACATTTTGTGCACCAAAAAATTTGTTGGATCAGTGTAAACTTCTAAAGACAGATAAATTTATTA GTACATTAGAAAAGTAACCAAGTGCAGCACAAGAACAAAGATATAACCAATAATGATTCTTTCACACCTCTAAGAGAGGT GGAAAGAGGTGAAATGAAGAGAGAGATAAGAATAAAAGAAAAGTAAGAGAG
CDS sequence (LotjaGi4g1v0305800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCTAGAAATGTCTTCTTCGTGTTTGAGTGGTGCAGGAGGAAGAGCAACCTACGGATTCGATTTGGATTTTGTTAA ATCTCCATCTTCATGGAGCAGAACCTCACAGTCATCTTCTTCACCTTCTTCCACCATCTCTGAATCCAGCAATTCCCAAT TAGCAATCGCCACCAGAAAACCCAGAACCCCTCGGAAACGACCCAACCAAACCTACAACGAAGCCGCCGCGCTTCTCTCC ACCGCCTACCCCAACCTCTTCTCCACCAAGACCCTCAAACAAACACCGTCACCAACCAATCACAATTTCATCAAGGAAGC ATCAGCAGCAGAATCATCGGAATTGCTTTTCCCTTTCAGGGTTTTGGACACGTCGTCATCGTCTTATCTACTTCACGGCC CAATCCAGCACAACCCACCGCCGCCGGAGCTCAAGGCGGTGGGTGTGGTGCCGGAGAAGCCGTGTCGGAGCCCCGGGGAG ATAAGCTCCAGGGTGAATTTACTCGATTTGGTGGAGGATGATTGCGGAGATGATTTCGATGCCGAATCGATTCTCGACGA GGAAATCGAGGAAGGGACGATTGACAGCATCATGGGAGGGAGGGTTCAGGAGGATTCCGACGGAGCTTCCTGGCAACACC ACCCGTGGATTGGATTTGGCGGGAAATTCGATTTCCGGCTAGGGTTTCCGAGGGCTGGAGTCAGGGCTCTCCGCTGCCAT GTCGATGACGGCGATTGGTGGAACTTTCCGCCGGTTGACATCCTCCAGATTTCGCCCAAGATTATCGGCGGCGGTGGAAG CAAACATCCGCCGGAGAAGAAGAAAAAGAAGAAGGTGGCGGTGGCTGCGGTGGCGGAGAAACCGAAGGTGGAGTTGAACG AAGCGGAATTGCCGAAAGCGAACGCTAGTTTGATGTTGAAACTGAATTACGACGACGTTCGGAGTGCTTGGTCTGGCCGG GGCTCGCCGTTCTCCGATGACAGCCCCGCCTCCGATGCGCCGGGAAATGACGTCACGGCACGGCTATCACAAATTGATTT ATTGTGGGACAATGGCGGAGTGAGGGAAGCTAGCGTGCTTCGCTACAAAGAGAAGCGACGTACGCGGCTCTTCTCGAAGA AGATCAGATACCAGGTCAGAAAAGTCAACGCAGATCGACGGCCTAGAATGAAGGTACAACCCAGTAGTTGA
Protein sequence (LotjaGi4g1v0305800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNLEMSSSCLSGAGGRATYGFDLDFVKSPSSWSRTSQSSSSPSSTISESSNSQLAIATRKPRTPRKRPNQTYNEAAALLS TAYPNLFSTKTLKQTPSPTNHNFIKEASAAESSELLFPFRVLDTSSSSYLLHGPIQHNPPPPELKAVGVVPEKPCRSPGE ISSRVNLLDLVEDDCGDDFDAESILDEEIEEGTIDSIMGGRVQEDSDGASWQHHPWIGFGGKFDFRLGFPRAGVRALRCH VDDGDWWNFPPVDILQISPKIIGGGGSKHPPEKKKKKKVAVAAVAEKPKVELNEAELPKANASLMLKLNYDDVRSAWSGR GSPFSDDSPASDAPGNDVTARLSQIDLLWDNGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKVQPSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 391 | 384 | 8.7E-129 | – | |
| PANTHER | 8 | 391 | 384 | 8.7E-129 | – | |
| MobiDBLite | 28 | 69 | 42 | - | – | |
| MobiDBLite | 28 | 58 | 31 | - | – | |
| ProSiteProfiles | 355 | 396 | 42 | 13.285 | ||
| Pfam | 355 | 392 | 38 | 1.2E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0305800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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