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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0306000 |
| Transcript ID | LotjaGi4g1v0306000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Proline-rich protein PRCC; TAIR: AT2G19270.1 mitotic checkpoint protein PRCC-carboxy-term protein; Swiss-Prot: sp|Q92733|PRCC_HUMAN Proline-rich protein PRCC; TrEMBL-Plants: tr|A0A0B2QCD0|A0A0B2QCD0_GLYSO Proline-rich protein PRCC; Found in the gene: LotjaGi4g1v0306000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:68184227..68190062) extracted from Lotus japonicus Gifu genome v1.2.
ATATGAAGCATTGTCGTCAAAATCAAAATGAATCATTCATCACAGAGCATCTGGTATCCTGGTTAAGACAAAGCGTATAG CTAGGGCTTGGGTGGTGTCATCATCGTTATCTTGTTTTGCTCTTGGTAGCCATGGATTCTCTGCTAGCAAACTACGCCTC TTCAGACGAAGAACAAGATCAACAACCACACAAACCAACCCAATCCACAAAAACCACAACGACGTCGTCTTCTCCTTCTT CTTCCTTCTTCTCCACTCTTCCTCCTCCCAAATCATCATCATCATCATCATCTTCTCTCTTTCAATCTCTTCCTCCACCC AAACAACCTTCTTCAACCGAAATCCCTAAACCTAAATCCCAATTCCAGGAACAACAACCCAAAAGGGTTGTCCAATTCAG ACCCCCAATTATCCCTCTACCTAACCCCACCGATCTCGACGACGACGACGATGACGAAGTTGATGAAGAAGAACAAGAAG AGCGAAACAGAAGAAGAAAATTGGAGTCGTCCACTCAAGCACCGTCGGTGAAATCATTCTTGTCCACCATTCCTGCACCC AGGAACACCGCCACTCTCGGTGTTCAATCGAGTTCCGGTTCTGGCCGGAGATCCATCATCGAAACCGATGCACCAGCACC AGCACCGGCACCGGTACCCGCACCGGTACCGGAGCTGCCGGCGTCAAGTTCTGCAGGAGAAGAGAGCGTTGATCAAAATG CTGCTGGTTATGAGAATTACCAGTATGGCACTGAACAGTATGATAGCTATGGCAATTACAGTTGGGGTACTGAGCCAGAG GCTGGAGCTGTTTATGGAAATAATGGTGGTGATGATGCCTATGCAAATTATGCTGCCTATGGGGATCAAGGACAAGGACA GTATGAAAGTAACTGGATTGATCGCTCCGTGCCGCCGGAGGCATCTGGGGTTAGTGATACTACGGTGATATTTCCTAGCA AGAGACGGAGGAATGAGATTCCCACGGAAGTGATTGAGGTGAAGCAAGATGAGCTTATGAAGAATCGGCCAAGAGAGGAT CAAGCTAAGATCACTGGGATAGCTTTTGGACCCTCTTACATGGTATTGTTTACTTGTGTTTTTTATTATTTAGCCTTTGA TTTTCTTAATTATCGATTTACATATATCTTGGTGCATAATTCAAAATGATGGGGAAATAAAGAGGAGATGTAAACCATAG AAAATGTGATAGAGGAGTAACATTTTGAAGAAACATTTGACCACAGGATATGGATTATGGAACTGAAAATGCAAGCCAAC AAAGTATACTCAGCATTGTTTAGATAAAAATATTAGATGGATGGGTGGTTACATAAGAAAAGATAAGATAAGATGAGGCT GGAGTCATACTTATTGTAGAGTAAGTGTTTAGACATGTGTGGAGAGGGTAGGCTAAACGGAGGATAGTTCAATAGTTAAA GTTACAGAGAGACCAAAGAAAACTAAAGGTCAAACCATTAAGTAAGATTTGTAGTTAATTGGTCATTTCTTAGACATGAA TCATGATGGAGTATGGTGACCACCTAGTGGGAAAAATCTTGATTGTTGTTGTTGGTGTGCACATATCTATCATGGTTTTT GTGAAACCTGAATTGGATTAACTAAATTTCAAGGTTAAGCTACTGCTGTTTGTGTGTTCGAGTGTGTCTTGGTTTGTAGT GGCTAGGTATTCAGTTTTTTGTTTGTTTAATGTTGCTTCTAATACAGCACACATATCAGTGTTGATTTAGTTGGGAATTT TTTGAATTCACAAAAATATGTCTGAAATAATTTTTGAGCCTCATTAAATCTCAATTTTATGGGAAAATATGCTTGAACAG TAGAGGAAATCTGGTAAGCTCAGTAGAGGGCTGGTTTTTTGGTAAACAGTTAGGGGAATATAGAAGGAAAAGTGGAAAAC TGAAAAACTTCAATTTTTACTTAGAAAAATCTAAACTCCCTTGTTAAAGCCCCAAAGCCCTTTCTATATAGCACAGAAAC CATTAAGAAACATCTAAATCTTAGACTATGTCTAATTTTAGCTTACTTAAATAACTTGAATTAATAGAAATTAAAAAGCA TAAACAAAATACAAAATAACACGGCTATAAGATCCATGCTGAAGTAGGATGAACAATACCCATCTACAATAGTCCAAAGG CAATCATAGGAGATATGTAAAGGTGATGCACATAATGCTTACTTTGGTCCCCAAGGAAGTGGTTCTGGACACAGAATAGA AGGCTTCAATTTAGTGTCTTGCATTTTTGTGAGCTGCAGAGGAAATTCATAGCTAATAGATTTCGAAATAAATAGTCAGG GTATTTTATCCTCGGTAGTTATTCCTGGAGGAAGCTGAGTGTTGGGTAGATCATTTTGGCTCAGTTTAATGTATATATAT TTTTGTGATAGAAAGAAGGGTAGACCTTAGGAATTTTGATTTGAGGAAGGATGATTAGATTTCATTAGACCGGTGAGAAG TACAATGGTTGAGCTGTTTAGAGAGGAACCTTCAGCATCTGCTAGGAAGCAGAGTGGTGCAGGAAGTCTTTGTGTTCATC TCTGTCTCACACTCTCACCACTAAGGCAAGTGACAGAAGGAAATGGAATACAACTTATTTTGCTGAGTATGAAAAGGATA TATTTGAGTCCATCAATTATTCTAAAGCATTATAAATTTTGAATATTGGATATATTTAATTAGCTGTCCTAGAAATTTCT TTAACAATTCATAACTAAATTTAGGAGATTGAGGAGCTTCCTCTTCAGCTATACCGTGTTGAAAATTACTGATAACGTGA CTTTTTGTTTGAAGAGTATGTGTAAGAAAAAATTTAGAAATATAGCAACCTTGAAAACTATAACCAATATTAGCCCAACA TAACTGTTATTCCTACACTTAATTTTTCCGTACCCTGATTCTACACACCTCTATGTTATGGGAAGATAGAGGGGGGGGGG GGGAGTGAATTTTTCTCTCCCCTTTTGCCTCCAAATGGTAGGTGGTGTAGGAATGATACATTGTGGTTTGCAGAAACTTT GGATGTATGTGTGGTATGAATGAAAATCTTTCAAAAAGGTGTCGGCTTGAGTATTTTTCACATGTCAGTCAAATGGCTCA TGGGATAATATTATTGGACTGTTTCTATACTGATATATGGGAGCTTTATCTTCTGCTGTAACTATCCCTACCAAAAATTA CACACAAAATTTGAAGATAATATTAGCTATGATCAAAATTACACACTTGTAACTTTCTATCTACTCCCTATAAAGGTATG TTTCTATTGTTATGTTGTATTTATTAACTTTTTCTTCTGTAGCCTGTCTCGTCGGCAAAAGGAAAGCCCACAAAGCTGCA TAAGAGGAAGCATCAAATTGGTTCATTGTACTTTGATATGAAGCAAAATGAAATGAAACTGGCCGAGCGGCGGGCAAAGG GCATGCTTACCAAAGCTGAAACACAAGCAAAATATGGATGGTGATTCAGGGATGATGCTGAACTCTGTGAATGCATGTTT GAAATCACTCTACAGTTGATTATGAAGACAAAATTAATTATGGGGAGGAACTTTTGTCTGTAGTTTTTTAGTGCTAGAGT TTATTCTAAGCTTACACAAACAAGTTTTGTGAATTTGTACCATGATTTACAAAGTGAAGCCTTTGTTTTTCACTGTTCTG AATGTATTCTTCAGCTCTGTTTTTTTAGTTCAAAGGATGAAATTTCATCATAATCTGACCATGGAATTTCAGACAGTACA AATTTTATCCTTGTGTTATGATATGAGTCGTGATAAATGGAATCATATTTCTTATTTTCTTTTCTCATTGCAGATTTTTT ATAGCCATTTTTTATTTATTTTACACAACTTTAGAGGTCAGGTTTTTTTAATATAACTTCTGTAATTTATCTTTTTATCC TTGCATTTTGACGAGCCAGAAAAATAATGAATTTGATAAATTTAAAATTGATCAAATTTCATATGAAAATGTGATGATAT AAAGGTAAAAAATAAACAATCTAACCGTTTTTGGTACCCTTATTGGCCTTATTACTCTATGCTTGGAAATGAAATAAAAA ATGCCTTTGAGAAGCACTCGCTCGCATATGTAATGTGGTTTGTAGAGATGTTCATGCCATTGCCAGGATATAATTAGGCA ATATGAGTAACGTTGACGAGCAACTATCATGAAGAACAACAAATTGAAGGCATGGATTTTGAAAATATCAAAATGAGGGA CATAGGAGGACGCAATTTCCCATTTTCATATATAAGCTGTACTCGATCATTACAATCATGCATACAAATTTGTGATAATC CACAGAAAGATGAACTAGACACTAGACAGACTCTTTTCCATCTGAAACTCCCCAATTCCATGACCAGAAAGAAAGTCTGA TTAAAACGTTGAGCCATTGAACCCAAAGAATGAGCGCTGCATGCATCAGAAAACCAATAAAATGAGCAAATAAGCAATGA ACATATATTACAAAAAGCTGTGACTATGACATTCAGCTAATGAAAATGAAGCTGTTTGAAAGGGTGTTATTGAGTATTGA CACATCCACCACAATAACATGCAAATTCAAAATAATGATGAAAAAACAAAACCATAATACATCAATTTTGTATGAGAAGA ACAATTCAGGAAATAAAGGACCACATGATTAGATAATTGTAGCAAAAATACTCTGCTTCTGCAGACAAAGTATTGCTAAA CAATGACCAGAAATCAATCTCTGCCTAAATAACTTGCCATCAATTCCTTGAGAAAACAGCACTAACCCAATAAACATTAT TCAAATCATGATTGGATTGAATGTATACATAGGAATCCTCCAAATTCAAAGAGTCAAACCGTTTCAATGCATGAAATCGC TTCACATTGAATAAGAATACTTCAAACAAGCTAAACAGTGTGGACAGGAAGTAAGTACTAGTAAGTAGTAACCAATGTTG ATTTGCAATCTTCTCAGAATCATATAAGGCTATAAGCTTGGCTTATCAAAAACAAATATAAGGCTATAAGCTATGATCAC AGAGCAGAACTGCAGAAGAATGCAGCAATTTACCTGAACATCATAAAACTTGATATAGAAACGGGAGCCATCAATATATA GCTTAGTCTGAAGAATTTCCGCAATTGTAGAACTCAATTTTCCATTAACACTTGGACCAAGACCCCCAATTGAGATGAGT TCTCCATAAGCAGCTGGTTCTTCAGTGCCACCAAATGCAATAGGCACTCCCCCATTCAACAAAATCATCACATACTGAAA TAAAAGCCAATAAGTAAGAAGACACAATCCAATTGCTGAAACATAAAAGAAGTGTTAATTGGTAGCACTACTGCTAAGTG TTGAATGAAAGTAGCCTAGGATAAAAGTATTTGCATTGAGAGAGTAATTTCATCAAACAATTGGTGTTCAAAAATGAAGT GAAAAGGGGAAAAGTGGGGCTTTACAGATTCGGGTTTTCCGATGATCTTTGCAACGGCTTTGGTGGCATCCCTGAGAATG TCGGAAGCAACCACAGCGTCCACAGGTATGTTTGTGAAGAGGTTTAAGGTGGGCATGGTGTTCTGGTTCTTGTTGCTGTT GGCAGCTATACTCACAGTGACCCTGGTGGTTTGAGTCAAAGCCTTCAAGATAAGCTACCTATCCCTTCACATACACACAG ACCAAGTTAACAAAGCATAGGGGGAAATTACAAATTAGTCTCCTTATGTTTCAGTTATTTTTATTTTTAAATTGTGTTAA TTTGTTTGGACGCGTTTACTATGGACCAGTTTTTGCTGGTCCATGGTTACACCACCTGCTTTTTACCTGCTACTAC
CDS sequence (LotjaGi4g1v0306000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTCTCTGCTAGCAAACTACGCCTCTTCAGACGAAGAACAAGATCAACAACCACACAAACCAACCCAATCCACAAA AACCACAACGACGTCGTCTTCTCCTTCTTCTTCCTTCTTCTCCACTCTTCCTCCTCCCAAATCATCATCATCATCATCAT CTTCTCTCTTTCAATCTCTTCCTCCACCCAAACAACCTTCTTCAACCGAAATCCCTAAACCTAAATCCCAATTCCAGGAA CAACAACCCAAAAGGGTTGTCCAATTCAGACCCCCAATTATCCCTCTACCTAACCCCACCGATCTCGACGACGACGACGA TGACGAAGTTGATGAAGAAGAACAAGAAGAGCGAAACAGAAGAAGAAAATTGGAGTCGTCCACTCAAGCACCGTCGGTGA AATCATTCTTGTCCACCATTCCTGCACCCAGGAACACCGCCACTCTCGGTGTTCAATCGAGTTCCGGTTCTGGCCGGAGA TCCATCATCGAAACCGATGCACCAGCACCAGCACCGGCACCGGTACCCGCACCGGTACCGGAGCTGCCGGCGTCAAGTTC TGCAGGAGAAGAGAGCGTTGATCAAAATGCTGCTGGTTATGAGAATTACCAGTATGGCACTGAACAGTATGATAGCTATG GCAATTACAGTTGGGGTACTGAGCCAGAGGCTGGAGCTGTTTATGGAAATAATGGTGGTGATGATGCCTATGCAAATTAT GCTGCCTATGGGGATCAAGGACAAGGACAGTATGAAAGTAACTGGATTGATCGCTCCGTGCCGCCGGAGGCATCTGGGGT TAGTGATACTACGGTGATATTTCCTAGCAAGAGACGGAGGAATGAGATTCCCACGGAAGTGATTGAGGTGAAGCAAGATG AGCTTATGAAGAATCGGCCAAGAGAGGATCAAGCTAAGATCACTGGGATAGCTTTTGGACCCTCTTACATGCCTGTCTCG TCGGCAAAAGGAAAGCCCACAAAGCTGCATAAGAGGAAGCATCAAATTGGTTCATTGTACTTTGATATGAAGCAAAATGA AATGAAACTGGCCGAGCGGCGGGCAAAGGGCATGCTTACCAAAGCTGAAACACAAGCAAAATATGGATGGTGA
Protein sequence (LotjaGi4g1v0306000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSLLANYASSDEEQDQQPHKPTQSTKTTTTSSSPSSSFFSTLPPPKSSSSSSSSLFQSLPPPKQPSSTEIPKPKSQFQE QQPKRVVQFRPPIIPLPNPTDLDDDDDDEVDEEEQEERNRRRKLESSTQAPSVKSFLSTIPAPRNTATLGVQSSSGSGRR SIIETDAPAPAPAPVPAPVPELPASSSAGEESVDQNAAGYENYQYGTEQYDSYGNYSWGTEPEAGAVYGNNGGDDAYANY AAYGDQGQGQYESNWIDRSVPPEASGVSDTTVIFPSKRRRNEIPTEVIEVKQDELMKNRPREDQAKITGIAFGPSYMPVS SAKGKPTKLHKRKHQIGSLYFDMKQNEMKLAERRAKGMLTKAETQAKYGW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 195 | 195 | - | – | |
| PANTHER | 1 | 370 | 370 | 4.2E-91 | ||
| MobiDBLite | 21 | 84 | 64 | - | – | |
| MobiDBLite | 100 | 114 | 15 | - | – | |
| MobiDBLite | 128 | 161 | 34 | - | – | |
| Pfam | 167 | 370 | 204 | 4.5E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0306000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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