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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0306100 |
| Transcript ID | LotjaGi4g1v0306100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Macrophage migration inhibitory factor like; TAIR: AT5G57170.1 Tautomerase/MIF superfamily protein; Swiss-Prot: sp|P91850|MIFH_BRUMA Macrophage migration inhibitory factor homolog; TrEMBL-Plants: tr|I3SC62|I3SC62_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0306100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:68184227..68190062) extracted from Lotus japonicus Gifu genome v1.2.
GTAGTAGCAGGTAAAAAGCAGGTGGTGTAACCATGGACCAGCAAAAACTGGTCCATAGTAAACGCGTCCAAACAAATTAA CACAATTTAAAAATAAAAATAACTGAAACATAAGGAGACTAATTTGTAATTTCCCCCTATGCTTTGTTAACTTGGTCTGT GTGTATGTGAAGGGATAGGTAGCTTATCTTGAAGGCTTTGACTCAAACCACCAGGGTCACTGTGAGTATAGCTGCCAACA GCAACAAGAACCAGAACACCATGCCCACCTTAAACCTCTTCACAAACATACCTGTGGACGCTGTGGTTGCTTCCGACATT CTCAGGGATGCCACCAAAGCCGTTGCAAAGATCATCGGAAAACCCGAATCTGTAAAGCCCCACTTTTCCCCTTTTCACTT CATTTTTGAACACCAATTGTTTGATGAAATTACTCTCTCAATGCAAATACTTTTATCCTAGGCTACTTTCATTCAACACT TAGCAGTAGTGCTACCAATTAACACTTCTTTTATGTTTCAGCAATTGGATTGTGTCTTCTTACTTATTGGCTTTTATTTC AGTATGTGATGATTTTGTTGAATGGGGGAGTGCCTATTGCATTTGGTGGCACTGAAGAACCAGCTGCTTATGGAGAACTC ATCTCAATTGGGGGTCTTGGTCCAAGTGTTAATGGAAAATTGAGTTCTACAATTGCGGAAATTCTTCAGACTAAGCTATA TATTGATGGCTCCCGTTTCTATATCAAGTTTTATGATGTTCAGGTAAATTGCTGCATTCTTCTGCAGTTCTGCTCTGTGA TCATAGCTTATAGCCTTATATTTGTTTTTGATAAGCCAAGCTTATAGCCTTATATGATTCTGAGAAGATTGCAAATCAAC ATTGGTTACTACTTACTAGTACTTACTTCCTGTCCACACTGTTTAGCTTGTTTGAAGTATTCTTATTCAATGTGAAGCGA TTTCATGCATTGAAACGGTTTGACTCTTTGAATTTGGAGGATTCCTATGTATACATTCAATCCAATCATGATTTGAATAA TGTTTATTGGGTTAGTGCTGTTTTCTCAAGGAATTGATGGCAAGTTATTTAGGCAGAGATTGATTTCTGGTCATTGTTTA GCAATACTTTGTCTGCAGAAGCAGAGTATTTTTGCTACAATTATCTAATCATGTGGTCCTTTATTTCCTGAATTGTTCTT CTCATACAAAATTGATGTATTATGGTTTTGTTTTTTCATCATTATTTTGAATTTGCATGTTATTGTGGTGGATGTGTCAA TACTCAATAACACCCTTTCAAACAGCTTCATTTTCATTAGCTGAATGTCATAGTCACAGCTTTTTGTAATATATGTTCAT TGCTTATTTGCTCATTTTATTGGTTTTCTGATGCATGCAGCGCTCATTCTTTGGGTTCAATGGCTCAACGTTTTAATCAG ACTTTCTTTCTGGTCATGGAATTGGGGAGTTTCAGATGGAAAAGAGTCTGTCTAGTGTCTAGTTCATCTTTCTGTGGATT ATCACAAATTTGTATGCATGATTGTAATGATCGAGTACAGCTTATATATGAAAATGGGAAATTGCGTCCTCCTATGTCCC TCATTTTGATATTTTCAAAATCCATGCCTTCAATTTGTTGTTCTTCATGATAGTTGCTCGTCAACGTTACTCATATTGCC TAATTATATCCTGGCAATGGCATGAACATCTCTACAAACCACATTACATATGCGAGCGAGTGCTTCTCAAAGGCATTTTT TATTTCATTTCCAAGCATAGAGTAATAAGGCCAATAAGGGTACCAAAAACGGTTAGATTGTTTATTTTTTACCTTTATAT CATCACATTTTCATATGAAATTTGATCAATTTTAAATTTATCAAATTCATTATTTTTCTGGCTCGTCAAAATGCAAGGAT AAAAAGATAAATTACAGAAGTTATATTAAAAAAACCTGACCTCTAAAGTTGTGTAAAATAAATAAAAAATGGCTATAAAA AATCTGCAATGAGAAAAGAAAATAAGAAATATGATTCCATTTATCACGACTCATATCATAACACAAGGATAAAATTTGTA CTGTCTGAAATTCCATGGTCAGATTATGATGAAATTTCATCCTTTGAACTAAAAAAACAGAGCTGAAGAATACATTCAGA ACAGTGAAAAACAAAGGCTTCACTTTGTAAATCATGGTACAAATTCACAAAACTTGTTTGTGTAAGCTTAGAATAAACTC TAGCACTAAAAAACTACAGACAAAAGTTCCTCCCCATAATTAATTTTGTCTTCATAATCAACTGTAGAGTGATTTCAAAC ATGCATTCACAGAGTTCAGCATCATCCCTGAATCACCATCCATATTTTGCTTGTGTTTCAGCTTTGGTAAGCATGCCCTT TGCCCGCCGCTCGGCCAGTTTCATTTCATTTTGCTTCATATCAAAGTACAATGAACCAATTTGATGCTTCCTCTTATGCA GCTTTGTGGGCTTTCCTTTTGCCGACGAGACAGGCTACAGAAGAAAAAGTTAATAAATACAACATAACAATAGAAACATA CCTTTATAGGGAGTAGATAGAAAGTTACAAGTGTGTAATTTTGATCATAGCTAATATTATCTTCAAATTTTGTGTGTAAT TTTTGGTAGGGATAGTTACAGCAGAAGATAAAGCTCCCATATATCAGTATAGAAACAGTCCAATAATATTATCCCATGAG CCATTTGACTGACATGTGAAAAATACTCAAGCCGACACCTTTTTGAAAGATTTTCATTCATACCACACATACATCCAAAG TTTCTGCAAACCACAATGTATCATTCCTACACCACCTACCATTTGGAGGCAAAAGGGGAGAGAAAAATTCACTCCCCCCC CCCCCCTCTATCTTCCCATAACATAGAGGTGTGTAGAATCAGGGTACGGAAAAATTAAGTGTAGGAATAACAGTTATGTT GGGCTAATATTGGTTATAGTTTTCAAGGTTGCTATATTTCTAAATTTTTTCTTACACATACTCTTCAAACAAAAAGTCAC GTTATCAGTAATTTTCAACACGGTATAGCTGAAGAGGAAGCTCCTCAATCTCCTAAATTTAGTTATGAATTGTTAAAGAA ATTTCTAGGACAGCTAATTAAATATATCCAATATTCAAAATTTATAATGCTTTAGAATAATTGATGGACTCAAATATATC CTTTTCATACTCAGCAAAATAAGTTGTATTCCATTTCCTTCTGTCACTTGCCTTAGTGGTGAGAGTGTGAGACAGAGATG AACACAAAGACTTCCTGCACCACTCTGCTTCCTAGCAGATGCTGAAGGTTCCTCTCTAAACAGCTCAACCATTGTACTTC TCACCGGTCTAATGAAATCTAATCATCCTTCCTCAAATCAAAATTCCTAAGGTCTACCCTTCTTTCTATCACAAAAATAT ATATACATTAAACTGAGCCAAAATGATCTACCCAACACTCAGCTTCCTCCAGGAATAACTACCGAGGATAAAATACCCTG ACTATTTATTTCGAAATCTATTAGCTATGAATTTCCTCTGCAGCTCACAAAAATGCAAGACACTAAATTGAAGCCTTCTA TTCTGTGTCCAGAACCACTTCCTTGGGGACCAAAGTAAGCATTATGTGCATCACCTTTACATATCTCCTATGATTGCCTT TGGACTATTGTAGATGGGTATTGTTCATCCTACTTCAGCATGGATCTTATAGCCGTGTTATTTTGTATTTTGTTTATGCT TTTTAATTTCTATTAATTCAAGTTATTTAAGTAAGCTAAAATTAGACATAGTCTAAGATTTAGATGTTTCTTAATGGTTT CTGTGCTATATAGAAAGGGCTTTGGGGCTTTAACAAGGGAGTTTAGATTTTTCTAAGTAAAAATTGAAGTTTTTCAGTTT TCCACTTTTCCTTCTATATTCCCCTAACTGTTTACCAAAAAACCAGCCCTCTACTGAGCTTACCAGATTTCCTCTACTGT TCAAGCATATTTTCCCATAAAATTGAGATTTAATGAGGCTCAAAAATTATTTCAGACATATTTTTGTGAATTCAAAAAAT TCCCAACTAAATCAACACTGATATGTGTGCTGTATTAGAAGCAACATTAAACAAACAAAAAACTGAATACCTAGCCACTA CAAACCAAGACACACTCGAACACACAAACAGCAGTAGCTTAACCTTGAAATTTAGTTAATCCAATTCAGGTTTCACAAAA ACCATGATAGATATGTGCACACCAACAACAACAATCAAGATTTTTCCCACTAGGTGGTCACCATACTCCATCATGATTCA TGTCTAAGAAATGACCAATTAACTACAAATCTTACTTAATGGTTTGACCTTTAGTTTTCTTTGGTCTCTCTGTAACTTTA ACTATTGAACTATCCTCCGTTTAGCCTACCCTCTCCACACATGTCTAAACACTTACTCTACAATAAGTATGACTCCAGCC TCATCTTATCTTATCTTTTCTTATGTAACCACCCATCCATCTAATATTTTTATCTAAACAATGCTGAGTATACTTTGTTG GCTTGCATTTTCAGTTCCATAATCCATATCCTGTGGTCAAATGTTTCTTCAAAATGTTACTCCTCTATCACATTTTCTAT GGTTTACATCTCCTCTTTATTTCCCCATCATTTTGAATTATGCACCAAGATATATGTAAATCGATAATTAAGAAAATCAA AGGCTAAATAATAAAAAACACAAGTAAACAATACCATGTAAGAGGGTCCAAAAGCTATCCCAGTGATCTTAGCTTGATCC TCTCTTGGCCGATTCTTCATAAGCTCATCTTGCTTCACCTCAATCACTTCCGTGGGAATCTCATTCCTCCGTCTCTTGCT AGGAAATATCACCGTAGTATCACTAACCCCAGATGCCTCCGGCGGCACGGAGCGATCAATCCAGTTACTTTCATACTGTC CTTGTCCTTGATCCCCATAGGCAGCATAATTTGCATAGGCATCATCACCACCATTATTTCCATAAACAGCTCCAGCCTCT GGCTCAGTACCCCAACTGTAATTGCCATAGCTATCATACTGTTCAGTGCCATACTGGTAATTCTCATAACCAGCAGCATT TTGATCAACGCTCTCTTCTCCTGCAGAACTTGACGCCGGCAGCTCCGGTACCGGTGCGGGTACCGGTGCCGGTGCTGGTG CTGGTGCATCGGTTTCGATGATGGATCTCCGGCCAGAACCGGAACTCGATTGAACACCGAGAGTGGCGGTGTTCCTGGGT GCAGGAATGGTGGACAAGAATGATTTCACCGACGGTGCTTGAGTGGACGACTCCAATTTTCTTCTTCTGTTTCGCTCTTC TTGTTCTTCTTCATCAACTTCGTCATCGTCGTCGTCGTCGAGATCGGTGGGGTTAGGTAGAGGGATAATTGGGGGTCTGA ATTGGACAACCCTTTTGGGTTGTTGTTCCTGGAATTGGGATTTAGGTTTAGGGATTTCGGTTGAAGAAGGTTGTTTGGGT GGAGGAAGAGATTGAAAGAGAGAAGATGATGATGATGATGATGATTTGGGAGGAGGAAGAGTGGAGAAGAAGGAAGAAGA AGGAGAAGACGACGTCGTTGTGGTTTTTGTGGATTGGGTTGGTTTGTGTGGTTGTTGATCTTGTTCTTCGTCTGAAGAGG CGTAGTTTGCTAGCAGAGAATCCATGGCTACCAAGAGCAAAACAAGATAACGATGATGACACCACCCAAGCCCTAGCTAT ACGCTTTGTCTTAACCAGGATACCAGATGCTCTGTGATGAATGATTCATTTTGATTTTGACGACAATGCTTCATAT
CDS sequence (LotjaGi4g1v0306100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCACCTTAAACCTCTTCACAAACATACCTGTGGACGCTGTGGTTGCTTCCGACATTCTCAGGGATGCCACCAAAGC CGTTGCAAAGATCATCGGAAAACCCGAATCTTATGTGATGATTTTGTTGAATGGGGGAGTGCCTATTGCATTTGGTGGCA CTGAAGAACCAGCTGCTTATGGAGAACTCATCTCAATTGGGGGTCTTGGTCCAAGTGTTAATGGAAAATTGAGTTCTACA ATTGCGGAAATTCTTCAGACTAAGCTATATATTGATGGCTCCCGTTTCTATATCAAGTTTTATGATGTTCAGCGCTCATT CTTTGGGTTCAATGGCTCAACGTTTTAA
Protein sequence (LotjaGi4g1v0306100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPTLNLFTNIPVDAVVASDILRDATKAVAKIIGKPESYVMILLNGGVPIAFGGTEEPAAYGELISIGGLGPSVNGKLSST IAEILQTKLYIDGSRFYIKFYDVQRSFFGFNGSTF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 115 | 115 | 2.2E-46 | – | |
| PANTHER | 1 | 115 | 115 | 2.2E-46 | ||
| Gene3D | 1 | 115 | 115 | 4.5E-38 | ||
| SUPERFAMILY | 1 | 115 | 115 | 6.01E-34 | ||
| Pfam | 2 | 115 | 114 | 2.4E-25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0306100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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