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LotjaGi4g1v0338700.1

Overview

Field Value
Gene ID LotjaGi4g1v0338700
Transcript ID LotjaGi4g1v0338700.1
Lotus japonicus genome version Gifu v1.2
Description Fumarylacetoacetate hydrolase family protein; TAIR: AT4G15940.1 Fumarylacetoacetate (FAA) hydrolase family; Swiss-Prot: sp|Q86I22|FAHD1_DICDI Acylpyruvase FAHD1, mitochondrial; TrEMBL-Plants: tr|I3T8S9|I3T8S9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0338700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:71888837..71894455) extracted from Lotus japonicus Gifu genome v1.2.

CTCAGTTGCTAATCGCCGATTACCACATCTAGCTTCATTCGCAAGTCCTCCAACTGACCATCAACATTACATTTTTATCC CTTGACATGTGTTAACTTGTTCTAGATACTGTGACCGTCTCTCCCAACAAATGATTTTTCCGAGTTTGATCTTGTGACAT TACTTTTACGAGATCTAACTTGCCAACTACTAGACCAACAATATTAAATACATTAAATGTACTATAATTCTAGAAATATT TAATATTCATGTCATAATAATTCGAAAATATTTAAAAAATATTTATTACTAGAAATTAAATTTTCTGTCAAAGGGTACAA TACAATTCCCTTTCAGTCTTTGATGAGCTGATTCTGCAAAAACGACATGTCGTTCGTGTGTTGTTAGCCATATTGACATT GAGACAGTGAGAACGACAAGTTTGGTCTGAACTCCGAAGAGAGCAGAGAAATGGCGACGGCAGCATGTCAGAAGCTTCTG GAATTGAGCACGAAGATCGTCGGCGTTGGCAGAAACTACGCCGCTCACGCTAAAGAACTAGGCAACGCCGTTCCCAAGGT AAGGTACCTTTCTCTCCCCTTTCCAGTTTCCATTGTTGTAACCTCCGATCTGATCAGAGTAATCGAATCGAATTGTGTTG TGTTGTTTTCAGGAGCCAGTGTTGTTTCTGAAACCCACGTCGTCTTACTTGAAAAATGGCGGAACCATTCAAATCCCACA CAACGAGAGTTCTCTGCATCACGAGGTTGAGCTCGCTGTTGTCATCGGGAAGAAGGCTCGTGACGTGCCGGAATCCTCTG CCATGGATTACGTTGCCGGTAGATGATTTCACCTTAGCTTTCAATTGTTTGATCAAGTTTATATGTTTATAGCTTTTATG CATTTTTGTGAATTTGCTTTGAATGGTTATGGTTGGGTTTTCATATAACAGGTTATGCATTGGCACTGGATATGACTGCC AGGGACCTTCAAGCTGCTGCCAAGGTAACTTTTTTTCAATCTTCCCTTTTAATGTTGAGGGAAATAATTTAGACATCATC TTCTATTATAGCCAGGGTTGTTAATGGCGGATAGCATAGCGTAGCAGCTAGTCCAAAAAACGCTATTTAGAGCGCTATGG CGGCGCTATAGCAGCAAATTGCAGACAATAGTGATGAATAGTGGAGTAGCGGTGAACCACCAGGGTGCTACGCTATAGCG AGCTATTAACAAACCTGATTATAGCTATCAGTTTTAGTTTAGAGATCAGTTAGTTGTTAGACAATTTTATTAGAGAGTTA GTTATCAGTTTTCAGTGAGTCTGTTATTTATGATAGCTACTCTCACTGTGTATATGTAATCACATTGATTCATTGATATA ATTCGAGTTCATTTTTTCATATTTCTCAGTTTAACATCGTCTAGTGACTGGCATCAGGCAAAATACAAGGTAGCACTTTG AATTGTAGTCTCACAGTCTCACTGATATTAGTTACTAACCGGTCTGAGCATATGAGAATTTGCGCTCAACTACTTGTTGA AGCACAATTAGCCAATTAGGTAGTTTCTTCATCTGCGAAGTTGTATTGTCATTGTGTGACATAAGGATGAGTCAATCAAG ATGAAAGAAATTGTTGAGTGACCAACTCATTTAATGAGTAGTGGTGACACTTCACTAGTGAAATATTTTCCTTTGATTGT TGCACTAAACGCAGGAACATTTTATTGTCGAAAGTGCACAAAACAACGGAATTTTCCCCCAAGATGTTCAGAAAATAACC CCCTAACAGACACACACACTAAGAACCTGTAAAACAGTTGGACTTGAACTTCTGGGATGTAAAGTGTAAACATGTATGAA ATGATTTGTGTGTTAATTCCCTTTTTTCTTTTGGTATGTGTTAATATCTTTCTGCTTAAATAAATTTATGCGTGATGCAA ACCTGATATTTTCATAATCTGATAACTGATGCAGTTTCTTATATCCCTTTGACTGTTAGTCTGCAGGTCTTCCGTGGAGT ATTGCAAAAGGCCAGGATACTTTCACACCGATTAGTTCTATTGTAAGCAAGTCTATCCTATGATGCTTATTGTATACTGA AACTATTTTATCAATATTAAAGAAATGAATTCACTCAATCCCAGTCCCGGATACTAATGTGCTTGCAAAGCATTAATGTG CTTGCATCAGAATTACCCCCGTGCATGTGATCTGGAAGTATATATTTCTTTCCTATAAATAAGAATTTGTACTAGCTTCT CATGCATGAGCCTTTAATTTAACTATACTCATTCTTCTATGCAAAATTTGAAAATCTCTACTGTGAGCAATGAATCAAGT TCACCCATAGATATTAGTGTATTTATATTATGAGCCAAGTGTAATTGGTTTCCTTAATTTTTTTTGCAGTTGCCCAAGTC TTCAGTACCAAACCCTGATGATCTAGAATTATGGATAAAGGTTTGAGAAATTTGGACTTATATCTTTATCACTTAGGTTC TAATAGTATATTGGTTATGCTTGCTTCAATGATGCATTAAAATCCTAAACTAATAGCAGAGAAATGGATTTGCTTTGATG TAGGTAGATGAGGAAATTCGGCAGAAGGGCTCAACCAAGGACATGATCTTCAAGCTCCCATTTTTAATTAGCCACATAAG CTCGCTCATGACATTGTTTGAAGGAGATGTCATACTAACCGGTATGGTCTTGATACTTCATCAGCATATTTATATTTAGC CGATATTTCACATGATGAAAGAATAACCTTGGCATATTGTCTGGTTTTTAAACCATCATTTGAGCCAATGAGAGTTGGTT CAGTTCATAGGATTGAGGGCATTTAGCACCCTAGATGAAAAGGTCTTGGGGTTAAATTTCTATTGGTGGATATTTGTTGG TAGTAATACTACTACTATAAGTTTCACTAAAACTTATTGCATGATGTATCCTTCGTACGGGGCAACATCCCTTCTCCCTG TAACTAATTTGAAGAATAAACAATGGAAGTAGTTATGTTTTGTTTTTGTTTTTATAAATTCCATAACAATGGCAAGGTTG CCACCTCTTGTCGGTAAATTGCTTTATTTTCCTCAAGATCATGGTTGTGGATAGGGCAAGAAATGAGTCAAGATAGCTCG TGAATTTGCTTTCAGCTAAGATCATTGTCAGTTCAATAAGCAGGAAATTTTGGCTCGAGCTTGAGTTGTCTCATGTTTGA GAGGTGGCTCAATATTATAGATAAAAAATGTTTTTATTAAGTTACAAATTCAAGCTCAACTAATGGAGCCTAAAATATTA AATTAATACAAGGCTCAATGCTGGTTCATTAAGCTCAATTAGCTCGTGAGTTAAAGGTAAGTTGAACTTGAACTCGGAAA ATATGCTCAATTTCTCATTTCTCCTGAACTTGGACTAGGCTTTGCTTGACTCACTTCCAGCCTTCCTTGGGGTTGGGGAC ATGTTATTCCTTTATTTTGGCTCCATACTAGATTTTAAATACAGGATATCAAGCTAATAGTTTAGGATGATGTGCAGGTA CTCCCCCTGGTGTTGGCCCTGTGAATGAAGGTCAAAGAATTACTGCAGGTATTACCGGCCTTGTGGACGTAGAGTTTAAT GTTGAAAAAAGGAAAAGACCAGGAAGTTCTTGATACTTTTACAAAGTTGAAACAAAGAGGATACACCATAAAAACTCCGT TATTTGGAGTTGAGTTCACACAATAATTATTAGTTTGTTTTCTCCTCATGGAATCAGTACTTCAATTCTCCGTTGGAAGT CCTATTTTAGGCATGTATCATGAAAAATGTGACAAGTATTTGCTACTGTGAAAAATAATCTTTCTTATGTACTTGGGGAA GTAAACATTGTATGATAGATAGGAAATAGCTTTCTCGTCTATTACAAATGATATTATTCATATCCCATTTAATCAAAGAG TTGTTCAGAGACAAACCATACACAGCATTAGAGTGCACACTCAGCAATAACTAAACGACAAAGATGCAAACCAAATGACC ACACAGACACAGGGACACATGCCCAAAAATAAAAGGCTAATAGAACATATTAGAACTTCCGCAAGAAATCGTAGATGTGA TTGTTGATCTCATTGGGCCTTTCTTGATGGAGGAAGTGTCCCACCCCTTCCAACACAACCACATCATCCAGAAGTGGCAC ATCTCTCTTGAATCCACCTTTGTGAATGTAATCCTTCGCGCCTGGTCCATTATAAGTCAGGTCAAGATCACCAACAACGA ACTTAACAGGCACTTGAACTTGAGCACCAGTCCACGGAGCATTCAGCTCCCAACTCCTACAAATGCAAGGTAGAAACTCA AATTACTAGTTTTGGTTAAAAAAAGCAAAAGCTGAATATAGTATAAACTACAATATTGTAGCAGAAGATAAACACTAACA TACAGATCCAAATTTCTGTAGTAGTTCAATCCACCAGTGAAGCCAGTCTTCTCAAATTTAGAGGCATAGTAGCTGCATTC TTCTTCAGATAGCCAAGAGGGTAACTCTATGGGAGAATCAGTTGGATGTCCAAACCCTTCACCCTTAGGCAGAAAAAGTG GACCAGGGGTGCGGTATGTGAAGAATTCCTTCAGAACTCTTTCAGTGCCAATCTCAGCAAATTCAGCTTCTATATCTCCA GGTTCCTATAATTTAAGCAACAACAACTTCAACAGTACACTTACCAATACCATCCAACAAAAAAACCTATAAAAGTATTA ATGTGTTTTTTTTTGGATAAATCAGATATCCACGGCCGCTGACAGTGGTGACTAATCTATCGCCACGAGTGTTCGCATTA AGCTACCAGCCGTAGTGACTAATCTATCATCGCGAGTGTTCGCATTAAGCTAATAAATGACTAACCACAAGATTAAACTA AAAAGTTGGAACAAACCTGAAATCTGCAGATATAGTAATCATTTCCATACACTGCTCTTAAAGTAGGAAGTGGCTTTCTC TTGGGGTGTCTGGGAGTGAAGGCCACACTCAAGATAACCATGGCCTTGACTCGTTCAGGGCGATACTGCGAAAGAGACCA AGCGGTGAGGGCACCCCAGTCATGGCCCACCACAAAAACCTTCTCTTGGTCGGGAGCAATTACGTCCAGCAACCTAATGA GGTCGCCGACGACATGGAGGCTGGTGTAGGAGGTTTGCGCGGCCGGCACATCGGTGTCACCGTAACCGCGGAGGTCCGGC GCGACACAGCGGTAACCGAGGGAAGCGAGGGCAGTGATCTGGTGGCGCCAGGAGTAGGATAGGTCTGGGAAGCCATGGAT GAAGAGGACCAAGGGGCCTTGACCCTTTTCAGCTATGTGCATGTTGATGCCATTGACGCTAACTGTTCGGTGCTCTACCC CTTCCATCACAGTCTCTCTGGCTTTGGTCGGTGGAGAATGTGTGCCACGACACTTTATATATAAGAGATGCTTTGCTTGT TGTGAATAATGAGAATTTAATTGAGTCTCTGATCAGTGGAGAATGCTTTGTTTTGCTTTATTATTGGTACGTGAATCACG TTTGGTCGGTCATTTTCCTCCTTTTGGAATTTGGAGCCATTCATAATGTGAAATGAAAAAGATGAACCAGTCATGGTCCT CAAATGGAAGAGAATTCAC
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0338700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGACGGCAGCATGTCAGAAGCTTCTGGAATTGAGCACGAAGATCGTCGGCGTTGGCAGAAACTACGCCGCTCACGC TAAAGAACTAGGCAACGCCGTTCCCAAGGAGCCAGTGTTGTTTCTGAAACCCACGTCGTCTTACTTGAAAAATGGCGGAA CCATTCAAATCCCACACAACGAGAGTTCTCTGCATCACGAGGTTGAGCTCGCTGTTGTCATCGGGAAGAAGGCTCGTGAC GTGCCGGAATCCTCTGCCATGGATTACGTTGCCGGTTATGCATTGGCACTGGATATGACTGCCAGGGACCTTCAAGCTGC TGCCAAGTCTGCAGGTCTTCCGTGGAGTATTGCAAAAGGCCAGGATACTTTCACACCGATTAGTTCTATTTTGCCCAAGT CTTCAGTACCAAACCCTGATGATCTAGAATTATGGATAAAGGTAGATGAGGAAATTCGGCAGAAGGGCTCAACCAAGGAC ATGATCTTCAAGCTCCCATTTTTAATTAGCCACATAAGCTCGCTCATGACATTGTTTGAAGGAGATGTCATACTAACCGG TACTCCCCCTGGTGTTGGCCCTGTGAATGAAGGTCAAAGAATTACTGCAGGTATTACCGGCCTTGTGGACGTAGAGTTTA ATGTTGAAAAAAGGAAAAGACCAGGAAGTTCTTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0338700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MATAACQKLLELSTKIVGVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLKNGGTIQIPHNESSLHHEVELAVVIGKKARD VPESSAMDYVAGYALALDMTARDLQAAAKSAGLPWSIAKGQDTFTPISSILPKSSVPNPDDLELWIKVDEEIRQKGSTKD MIFKLPFLISHISSLMTLFEGDVILTGTPPGVGPVNEGQRITAGITGLVDVEFNVEKRKRPGSS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11820:SF108
1 221 221 1.2E-109 –
PANTHER
PTHR11820
1 221 221 1.2E-109 –
Gene3D
G3DSA:3.90.850.10
2 219 218 6.0E-84
IPR036663
SUPERFAMILY
SSF56529
14 216 203 1.83E-71
IPR036663
Pfam
PF01557
15 215 201 2.6E-59
IPR011234

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0338700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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