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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0358200 |
| Transcript ID | LotjaGi4g1v0358200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF789 family protein; TAIR: AT2G01260.1 hypothetical protein (DUF789); Swiss-Prot: sp|A9Z1Z3|FR1L4_HUMAN Fer-1-like protein 4; TrEMBL-Plants: tr|A0A0R0K099|A0A0R0K099_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0358200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:73693878..73700035) extracted from Lotus japonicus Gifu genome v1.2.
AAGTGAGTCCCTGAACTTCATATAATTTGTGAAATGACCCAAGAAAATGGAGAATAACAGAATCTCCACCAAGCTTGGTA TGCACTCGTTCTTTCCCCTCTCTCTCTTTCACAGTTTGGTTTTTGTCGCAGTGTGAGAGAAAGCGTTGAAGCTTTTCTTC TTCCTCTACCCTTCTTCTCTTCTTCAATTTCACTGTTCCTTTCTTCGCTTTTCCTTCAATCATTCCAATCATCCCTTTAC TCGCAACCTTTTCTGACCAAAAAAATTTCTGGGTTTCATCTATTTTTCGTTGGAAACAATCGGAAACTGGTAAAAAAACG ATTTTGTTATCTGGGTATTGTTCATCATCGTCTAGTACTTTCCTCTGTGGCCAAACGGAGGAGAAAATAGTTGGAAAATG CTGGGGACTGCACTGCAGTTTGGTGGTGTTCGTGGTGGTGATGATCGGTTCTATATTCCGGTGAAGGCAAGGAAGAATCA GAATCAGCGTAAACAAGCTCAGAAAGCTGAAAGTGGTGGTGATTCAACACCCAAGAGTAAACTTGTTGCTGCTGAAAATG AGAGTCCTGAAACTCTTTGTCCATCTGTGGAGTCTATTAGTAATATTGATAGGTTCTTGGAGTCAACAACGCCTTTTGTT CCGGCTCAGTATTTCTCCAAGGTTGATCTCAACTCAATTCATGGTTTTTACTTTTTGATGGGTTGCTTTTGAACTGCTGA AATAATCATTGAAATGTGGTGTTGAATATTTAGCTGTCAACTAGTTCAGGACATGAATTTGTCATGGTTTTCACCCTTTT TCGTGCATTTAGTTGTATAATTGGTTGGTTACAATTACAAAGTTTGATTCTTAGAATTCTTGTTAGCATTGAATGTTTTT TTGACTCCTTTTTGTTCTGTTGTGGGTGTAGACAACTATGAGAGGTTGGAAGACTTGTGATGTAGAGTATCAGTCTTACT TCTCCTTGAATGATCTGTGGGAATCGTTTAAGGAGTGGAGTGCATATGGAGCAGGAGTGCCTTTGCTGCTTGATCAAGGA GAATCTGTTGTTCAATATTATGTTCCGTATTTGTCAGCTATTCAGCTATATGGTCAGTCTGCAGAGAAACCAAGTGCCAA GCCAAGGTATTAGCATTTCACATATAAACCCTTTTTTTTTATATGTGCATAAGAATTGGTAACTTAAGAAACTAACCACT GGAAATATGAGAGTTGTTGACAGTTGCAGCTCTTCTGCTCCGGTGCTCTCTGATTTGTTTTTTGTATATGTACATATTGG TTAAATGGATCTTATGAGGTTTGTGCATGCTGGTTGAAAGGTGAAATGAAACAAAAAAGAGAAGTAAATGAAAGAGAAAT ATATGTGGTTTTAGTCTTTGTAAGTTTATACTTGTGATAGATGTCGAAATGGCAGTTTGAATTGGTGAAAACCAGGAAGA TGATATTGTTAGCTGTTTATAATAGAAAATGGTATGTGTTTTGACTTTGTTTACCCTCAAGAGGAATGTCATGATCACTA TCCCCTATTTTGGATGCAGTAACTTGGGCTTTTGTAAAATAATTATGTAAATAATTTGAATTCTATAGGTTATAACTATT TGATTTTGTTTTTTTGTTTGTAATCTTTCTTCGGATGATTTGTGGACTAAACTTAATCACCATTTTTTAGCCTCCCACTC TTCCCTTCTAGTAAAATAGAATGAATAGCATTTTTATTGACGTTTAATACATGGATCATGGTTTATCAAAATTGATATTG AAGGCATAAGTTATATAATTTTATGAGTTTACTCTGAAAAGTGTTCAATTCTATTTAAATCACTATTGAGGGAATTGTTT GGATATGTGCTTTAAAGCACTGAATTTTGAACTCACTTCCACAAAGAGATGTCATGCTTTTACTTTCAGACTATTTTGTT GAAATTTGGACAGAATTGTGAAAGGTACTGTTGTGTGGGTGTGTGCACTGTATTTAAGCCTTGTCCTAAGCTCTTAAGGT CGTTATGTAGCTGCATCTTCGTCAACCATATCCTGTGTCTTTGTTGCTTATATTTTATGTTCATGCTGTGTTTGATTCAC TTCTTTTGAGCAACTCTGTCCAGCTGTTTAGATATGATTAGCTGTAAAAGATTGGCTGTCAGGTGGAAGAGTGAAGAAAA TGTTTGTGGGGTGAGGTAATTGGAGACACGGCACTTGAGGGTATTGAGAGCCCTCTTCTTATGTTTGATGTGGTGGTTAT CTGATCAATATTTAATATGATTCCCTGTATTGCTTCAGGGGATCTCCTTTATATTTGTTTGGTAGAAGTGAAACCAGGAG AAATAGAATAGAACTAGAAGAATGTTGGTGAGTGAGGTGTCTAGGCGTGTGTCGTGTCAAATATCTTATCAAATATGACT TTATCCTCTTTATTCCATCCACTTTTCACCCTAACCAATAACTTTTCACCCTCTTGATCATTATATGTTATAAATTGATA TTTTTTATGGACTAGTGATTCATTTTAGATCCCAATATATTTCACATGAGATATTTTTACCTTGTTCTCTCTTCTGTCTC TCTATGTGGCTACTCATTCCTCGTGTAGTCAATGTCCTACTGAATTTGTCAATTTAATTTTGCTATTTCTGTAATATGTA AACTCATTTAGTGGGATAAGGATTTTGTTGTTGTTGTTGTAAACTCATTCTCATACCTCTATGCACTTATAACGTACAAG GGTAACTCAAGCGCTTGTTTGTCACGTGGTATCTTGTTAGCAACCAGATCTGATTTTCTTAATGTCATTAGGCACACCAG TGAAGATAGTGATGGTGATTACTGCAAAGATTCGTGTAGTGAAGGAAGCAGCGATTATGAATATGGTAAAAAGACTGAGC GTTTTATGGCACAAAGAACTAGTAAATATTTGACAGGTGGTGCCTCTTTTCAAATGCATACACTGTCTATACACGATAAA AACAATACAATGCAAGAGGGCTTTTCTAGTGATGACAGTGAAACTGGGAACCCTCAAGATCTGCTTTTTGAGTATTTGGA ACAAGATCCTCCTTACAGCCGTGAACCCTTGACTGACAAGGCAATTACTCATTTGAAATAATGTGTGGCTTTTTCACCAT TGCTCTGAACATTCCGTCTTATATTTTATATGATGTGGACAGATACTAGATCTTGCACGCCACTATCCCGCCCTCAAGTC ACTGAGAAGTTGTGATTTATTGCCAAACAGTTGGATGTCTGTTGCATGGTAATCTAATGCTTATTTCCTCTTTTTTGTTT TGTTTGGATAGACATAACAATTACTTTAGTGCTGGTTTTTTTTGTCAGCTAACATATTTTGATGTCATTTTCTAGGTATC CTATATATAGAATACCCACAGGGGCAACATTAAAAGATTTAGATGCCTGCTTTCTAACATACCATACACTCCATTCACCA TTGACGGGTAATTTGGAGCTTCAACTCTGTGTTGATCTGCAGTGGCATTTTAGCTTTGTTAAGCTGCACTTAGTTTTTTC CTCAATGTTGTTAGTGCATGTGCATTTGAAGATTTTTTAGAATAATTTACCCTGTCAATAATGCAAAGTTTTATCGATTT AGTCCCCTTAATCATGCAAAATTTATCCTCAAATTAGGACTCCATACTTTATCTGTCTTACAAAGAAGGATCATTTTGAT GATGCTTTGCATAGTTAAAAGATTAAATTGATGACAGGCTTTTTCAATGACTAAAGTGTTTAATGCCTGTACTTTGGAGG ACGTAAATAGGGGTTTCCTTTATCCTGTATAATATCAGTCAGAAAGAGAATATTCACAAAGCATATTAATCCCTTTTTGT CAATTAAGATGAAAGACAGTCATCTGCTCCAATGGCATGTGTATTCATTAGATTTCTTTTTATCTTTCATTTGACTTTTT TAATTCTGAATAATAAGCACATCATATTTTGCTTTATGTGTTTTTGTATATATATGTTTTTCCATTGAAATAAGTGCTGA GTTTCATTTAAAACAGAGCACTTGATAAATTACTTTGGCAAAGAAAATATGGGTTGAGGAAACATAGAAAGAGAGGTTGT GTTTTAAACATAATTCTAGCTGATCAAAGAATGAGGTCGATATTCTTTTTCCTCTTTGGCCAAATCATCTTGAGACCAGT TTTAGAATTTCTAGGTTATTCTGAGGTTTTGATGCTATGCAGATTGGACTTTCTTCTTAGCATTCAAGTATTGCACTCAA TTGTTGTCTGGCCTTAGTATTGACTGTTGACCACTTAAACTACTCTGATATGTTCCTTATTTTGCTACTTATAGCTAGCT TATACCTTTGTGATAACTTATGCATCAATCCCTTTTTTTAAATATTATCTTTTGGGATACTTTGCAACTACATTGCTCAC ACCTGCACATGTGGGAGCATCTAGTACAGTTCTGCAGAGTTTCTGTGGGAACTGGCTGCATCATGTTGTCAACTGTGCAG TTAATAACAGACTGAGTGCAAGTCTGCAACTGATTTGTAACTACATGTTTTTTTAATCTTTTAATGAAGGACGATTTCAA AGGCACGAGACTAGGGTTCTAAATCACATTGCTCTGTCTACAAATATGGAAAAATACGAACTGACTCTTAAACACATTGC TCTGTCTAACTGGTTGTTAGGGTTCTAAATACTATTGGGCCTGGGGCGAATGAGCCTATTTGATTTTGAGCTTGGGTTGA TTTTATCTGTTTGCTTTTGTTATTTGCTTTTGAATTGAGTTCTTTTGTTTTTTGAGTTGGGCCTATGTTGGACCAGAGTC ATTTGCTTAGTAGGGTTAGTTTATTATAAATAGGAGTATTCTCTTTAGGTTAGGTCGGATTTGAGTATTGAGTTGGTAAA AGGGTTTTACCCTTCGAAGGGAGTCTTCTTAGTCCCTTGTAAGAAGTTTTACCTTCTTGTTAATTTTCCAGCATCTAATT CCAGTTTTAAATAATAATAAATCCCAAAAATTACTCATATTTCTCTTCCTTTACTTTGTGACTGCTGTTAGGTTAATTAA AAACCTAACACTGGTTGATGTTATCTCAGCTGTTATGCAAAAATAATGATTCCATTCAAAATAATGAAATGTAATTTCTG TTTAATGAAGTTTCGACTAATTTATTTTCAAAATTAATTTTATAAATTTGCAGGAAGTGGTGGTGCTCATGCTCCAGTAC TGGTTTATCCCAGTGAGATGGATGGTGTCCCAAAGATATCCATACCTACTTTTGCAATGGCTTCCTATAAGTTAAAGGGA TCTATTTGGATGAAGAAAGGAGCTTGTGAGATTCAAGTGATGAATTCCCTCTTGCAGGCTGCAGATAACTGGTTAAGGCT AGTTCAGGTGAATCACCCTGATTATCAGTTCTTTACATCACATGGCACATACCACAGATGAAGTGAATGAAATGACACGT CTTTCCCTTCTCTCGGCCAAAACTAAGCCTTAATTTCTGTGTTAATTGCTTGGTGCAAACTTGATAAAACAAAGTTTGGA GATTGTGATGGCATAGGGGATGCCTCATGCCTGATTGTGGGGTTCTTGTTATATGTTTAAGCAGCACAAAAGATGAAGCT GAAATCAACTTCCCTAAAGTGAAAATGAAAAAGGGAAAAAAGAGTAGCTTTATTTGGGTGGAAAAGTATCAGGTAAGTGG AATGCCTTATTGTGAAAAGGCAGTAAAACTAAATATAAAACAAAAGAGGGTATGCAAAGAGGTTTACAGGGAGGATGTGT GGGATTAAGGCCTGAGTGTACAAGCCTTTTTTAATTCAATAATGGTTGAGATCCCTTTAACTTTTAGACATGAATATTTA CAGATGTTGTGATTTAGAAGAAACTGGGTGAAATCCAAGGCCCAATTATGGCACTATTATATGATGGATATCTAATTGCT GTGGTTTGGGATCCCTTGTGGGGGAACCATATCTTGTTGTTCTTGTACTCATACGATGTTAATAGTTAGTTTGTAGAAGG ATTATGAATACTTGGTAGAGAACGTTTGAATCAAATCTTAGTTTTCATATAGAGATGAAACTTTAAAAAAGATCTAATAT TTGTTTTGAGAACAGGAATGAAACTTGGTGTATATTCGGATTTTCGTTGAACTCAATGTTGATCAAAATTGTTTTTTC
CDS sequence (LotjaGi4g1v0358200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGGGGACTGCACTGCAGTTTGGTGGTGTTCGTGGTGGTGATGATCGGTTCTATATTCCGGTGAAGGCAAGGAAGAA TCAGAATCAGCGTAAACAAGCTCAGAAAGCTGAAAGTGGTGGTGATTCAACACCCAAGAGTAAACTTGTTGCTGCTGAAA ATGAGAGTCCTGAAACTCTTTGTCCATCTGTGGAGTCTATTAGTAATATTGATAGGTTCTTGGAGTCAACAACGCCTTTT GTTCCGGCTCAGTATTTCTCCAAGACAACTATGAGAGGTTGGAAGACTTGTGATGTAGAGTATCAGTCTTACTTCTCCTT GAATGATCTGTGGGAATCGTTTAAGGAGTGGAGTGCATATGGAGCAGGAGTGCCTTTGCTGCTTGATCAAGGAGAATCTG TTGTTCAATATTATGTTCCGTATTTGTCAGCTATTCAGCTATATGGTCAGTCTGCAGAGAAACCAAGTGCCAAGCCAAGG CACACCAGTGAAGATAGTGATGGTGATTACTGCAAAGATTCGTGTAGTGAAGGAAGCAGCGATTATGAATATGGTAAAAA GACTGAGCGTTTTATGGCACAAAGAACTAGTAAATATTTGACAGGTGGTGCCTCTTTTCAAATGCATACACTGTCTATAC ACGATAAAAACAATACAATGCAAGAGGGCTTTTCTAGTGATGACAGTGAAACTGGGAACCCTCAAGATCTGCTTTTTGAG TATTTGGAACAAGATCCTCCTTACAGCCGTGAACCCTTGACTGACAAGATACTAGATCTTGCACGCCACTATCCCGCCCT CAAGTCACTGAGAAGTTGTGATTTATTGCCAAACAGTTGGATGTCTGTTGCATGGTATCCTATATATAGAATACCCACAG GGGCAACATTAAAAGATTTAGATGCCTGCTTTCTAACATACCATACACTCCATTCACCATTGACGGGAAGTGGTGGTGCT CATGCTCCAGTACTGGTTTATCCCAGTGAGATGGATGGTGTCCCAAAGATATCCATACCTACTTTTGCAATGGCTTCCTA TAAGTTAAAGGGATCTATTTGGATGAAGAAAGGAGCTTGTGAGATTCAAGTGATGAATTCCCTCTTGCAGGCTGCAGATA ACTGGTTAAGGCTAGTTCAGGTGAATCACCCTGATTATCAGTTCTTTACATCACATGGCACATACCACAGATGA
Protein sequence (LotjaGi4g1v0358200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLGTALQFGGVRGGDDRFYIPVKARKNQNQRKQAQKAESGGDSTPKSKLVAAENESPETLCPSVESISNIDRFLESTTPF VPAQYFSKTTMRGWKTCDVEYQSYFSLNDLWESFKEWSAYGAGVPLLLDQGESVVQYYVPYLSAIQLYGQSAEKPSAKPR HTSEDSDGDYCKDSCSEGSSDYEYGKKTERFMAQRTSKYLTGGASFQMHTLSIHDKNNTMQEGFSSDDSETGNPQDLLFE YLEQDPPYSREPLTDKILDLARHYPALKSLRSCDLLPNSWMSVAWYPIYRIPTGATLKDLDACFLTYHTLHSPLTGSGGA HAPVLVYPSEMDGVPKISIPTFAMASYKLKGSIWMKKGACEIQVMNSLLQAADNWLRLVQVNHPDYQFFTSHGTYHR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 397 | 397 | 6.8E-218 | – | |
| PANTHER | 1 | 397 | 397 | 6.8E-218 | – | |
| MobiDBLite | 25 | 56 | 32 | - | – | |
| Pfam | 68 | 389 | 322 | 6.6E-108 | ||
| MobiDBLite | 153 | 179 | 27 | - | – | |
| MobiDBLite | 157 | 179 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0358200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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