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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0367900 |
| Transcript ID | LotjaGi4g1v0367900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MACPF domain protein; TAIR: AT1G14780.1 MAC/Perforin domain-containing protein; Swiss-Prot: sp|Q8L612|MACP1_ARATH MACPF domain-containing protein At1g14780; TrEMBL-Plants: tr|A0A151SDK8|A0A151SDK8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0367900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:74766741..74772689) extracted from Lotus japonicus Gifu genome v1.2.
AATCAATGTCAAATTGTCAAAGAGTCATTTTAGCTTTTTGAAACATTGGTTCTTATGTTGTTGACCAATACAAAAACGTT TTAGGTTCTGTTCTTCACTCCTTTCCGTTTTCACAACAAAACGCCACAGACACTGTCAAACTCCAATCCTACACACTTTT CCCGTTTCATCTTCTTCAATTCTTCAACTCTCCATCTCTTCTTCTTCTTCTTCTTCCCCTGAAACCGAACCATCGTTGCG TAACGCTCACTGATCCCATCTTCACCTTCCTCGAACCTTCCCTTTGATTTCTCACCATCCATCTGCACCTAACACTACCC ATTTGGCCACAATCACCGAATCCAGCTCCTTTCTTTGTCCCCTTGTTGCTTTTCCTATAAAACTTCAATCTTTTCCCAAA CCCCATTTGACACAGTAACGCGTTTAGTTGGTGATGGCGGTGGAGGAAGAGGGTATTGAGATGGTGGCATTGGAGTCTCT GGGTAAAGGGTTTGATTTGGCCAGTGATTTTCGGTTGAGGTTTGCAAAGGGAATTCGTGAAGGGAGGGGTAGTAGTAGTA GTAGGAAGAGGTTGGTGGTGCTTGATGAACAGAACAAGAGGGATATTTTGATTCCTGGAGCTGGTGGAGTTACAATCAAA GGTGTTTCTGAGAATATTCGTTGTGATAAAGGTGATCTTCTTCGCTTCAAGTCTGATGTGCTTGAATTCAACCAGGTTGG TACCCTTTTTCATCTTCTTTTTGTAACTGTTATTGGAATGAAGCAAATTGAATTTGAAAGATATCACTAATTTTGATTTG TTTTTGTGAACCTTGAATTTGTTGGTTGTAGATGTCTGAGTTGCTTAATCAGAAATCAGCAGTGCAAGGGAAAATCCCTT CTGGCTATTTCAATGCTCTGTTTGATTTAAGTGGTGATTGGTTTCGTGATGCTGCTGATACCAAATATCTGGCTTTCGAT GGGTATTTCATTTCACTTTACTATCTGCACCTGACAGCTTCTCCAATAGTCCTACAAGAAGAAGTAAAGAAGTCTGTTCC AGCTCAGTGGGATCCTGCTGCATTGTCTAGGTAAACACTACGCCAACAATAATTTGTTATGAATATATAGATTATAGAGT CTGTGTTTTCCTGTTGTAAATTGACTCATCTTTTGTTTCTGTAACTTGTCATGTGATTGAATTTAATTAATTCAATTTTT TGTTGGTTTTTGTGCTCTCAGTCTTTTGACAATCCCTGCAAAATTTAGTAGTTTTTGGTGTGGAAGAACAAGTATAAAAG AATGTAATATGATAGTACCTTCTTACCTTTAGTATGAGGCTCAAATTACCTTTTTAGACAAAGTTATTGTACTATTGGAC TTGATAGCAGTCGATGTTAATTTAAGTGTTATGTTTTGATTGTTTTTTATAAGTAAATCAGTCTGGAAGAGTAAGAGCGC TTTTGGTTTACGGTTACAAAGCATGAAAATGAGAAAATAACACGTCCTGAGGCACTCTTTGTTGAAGTAATTCAACAAAA TAGTGCATTGGGATGTGTAGTAGTTTCCCGTTTTTATGCTTTCTAATTACTAGTAAACCAAACGTGCTCTAACTGATGTT TGACAGTTTGGATGGTGGATAGTTTTGGGTTGATAAGATTATAGGTGTATATGATGCTGATCAATTTGGCTAGGCAGGTT CATCCAGACATATGGTACACACTTAATAGTAGGCATGGCTGTTGGAGGTCAAGATGTAATCTGTGTCAAACAAAAACATT CTTCAAAGATTCCTCCTGGTGATCTCAGAAGGCATTTAGAGGATCTTGGAGATTTTTTATTTTCAGATGTAAGGAGCCCT CCTTTACTACAGAGGAAAGCGGCAGATGGCAAACAGAAGGTATAGTGCTTTATCTTGTGCAGCTGTATTATGTTTGTTAC TTTTCTGTTGATGCAATCTCTCTGTTCATGTAGGTTCCTGAGGTCTTTAATCGTGTCATGCAATCAAACACTATGTCATT CACCAGCATTTCGGAAACATCGAGCAAGGATGTAAGCCCTGAAAGAGAAATCTTTACCATTTGGAATAAATACATTTTCT AGGTTGTGAAATTAATATATTGCTTTATCTTGGAACAGGGCCTCACTATCATTTGCTCTAAAAGAGGAGGAGATATGCTC AAGCACAGTCATTCGAGTTGGCTCCAGACTGTGCCATCTAATCCTGAAGCAATCCTCTTCAAGTTTGTTCCTATTTCCTC ACTTCTGGCTGGAATTCCTGGAAGTGGCTATCTTAGTCATGCCATCAATTTGTATTTACGGTGTAGGTTCTTCTCAGATT TGAAAGTCATACATGATCTGCTTCATTTACTCATATCCAGTTTATTTCTATTACTACCTAGACATTTTTTACCATGTTGC ATATAAGCTTCAGAATAAAAACTAGAATTGCTGGCATGGAACCGTAGTTTAATTTCTTCACTGTTAAGGCACACAACACG TCATTGATTCACTTATTCTCTACAGATAAGCCTCCTGCTGAAGATTTACAATATTTTTTGGAGTTTCAAATTCCAAGGCA ATGGGCGCCCATGTTTTGCGAGCTGCCTCTCAGACATCATCAGCGGAGGAAGTCTTCTTCCCCTTCCCTGCAATTTAATT TCTTGGGTCCAAAGCTTCATGTCAGCTCTACACAGGTACAGTTAACCAAATCTCCTGTTTGAGCTAGTAAGTGTTGCATT GCATGTGTTGGACTGTATTTCCTTTCCAAAACCATATATTTTTTAAGCAAAGCACTATCACATCTTTATCAATAAATATT GAAGTTTCAACTTGTTTCGGGGAGAAATACTTAGTCTGGCTCACGAAGGAAGAAAGTGCTGGATGAATTGAGGAGAAACA CTTTTTCTTATTTTTAAGAACAAGGGAGATATAAGAATAGAAGGATTGAGCTTGAGTTTGCAACTATGGAAAGATATTGA ACAAGGTAGATAAACAGAATTTTCCCAACTATAGAGGGATTAAGCTTATGAGCCATATGCGAAAGGGTAATTAAACGCAA ATCAAGACAATAGATCACTTTTTAGATAATTGATTAGGTTTTATGGTAGGCAGGTCAAGCATGGACGCATTATACCTTTC TATGAATATTGCTAGATGTGTTAGAGAAAGCATAAAGATCTACATATGGTTTAGCCATGTCAGGAGAAGACTGATAGAAG CCTTAGTAAGAATAGTTGATACATTGGAGAATAGTACAATAGCCTGAGGTTAAAAGAAGACCAAAAAAGTTATAGGGGAA ACCATTAAAAAGGACTTGTCTCTACATAGGTTTTTCCATAGATTTGGTTAATGACAGAACACAACACTGTTGTTTGATCC CTGTAGTTTTCTTTACCAAATTGGAAAAGGCTTTTGTTGTAGTGAAGACTGAACAGTCTTTCAGGTTGGCTTCTCATATT TGGTTTTTTTTTGTCTTGAGTTGGTAGCCACGTCCTCCGAAATGTCTTAATGCTGTTAGCTAGGGAGTTTTGACATCTTG ATGCAAAGGTGCCAAAAAGCACTCTCTTGACTATTTGGCTATTTTGTATGAACTTTTTGTACTTTGGGGGGTGTACATTG GCAAATTTTATATTTATGAAATAGTGTGAATTTTGAATCATTGATATTTTTTAGTGGATCATGTGCTTCTGGCCTGTGTC CCACTTCTTGCTGCCTATGACAATTTTGGGTGAGACTTGAGAGAAATCTGAAATGTAGTTCCTCCCTATAGTCAAAATCC TGAAGTCTATGAACCTTTCTCATATAAGTGCTACCATGTTCTTTCACTTTTCATCATTTCAATTTTAATCATGATGTGTT GCATAACTTTATAGGATTATCACCCTTATTTTGTTTTGTTTTCCATTCATCTCATGTCTGCCCGGCAACTATCTTGAGTT ATGGACACTTTATTCTTATAGTTCACAACATTATGTTCTCTAGTTAATGGTGTTATTTTTACACGAAATGCCAGGTGTTA AGTGAACAAAAGCCTGTAGTTGGCCTCCGCCTGTACTTGGAGGGCAGGAAATGTGATAGACTTGCTTTACACATACATCA TCTTTCAAGTCTCCCAAATAAGATGATCCTCTCTTCAGAGACATCGACTCCAAGCATGTGGCGAGGATCTGATGATAATG AATCCAGTAACCAATTCCTGGAACCAGTCAGATGGAAGCGATTCTCAAATGTGTGCACAGCTGTGGTCAAGCATGACCCT AACTGGCTGAACAGTTCAACAGGCGTTTATATAGTAACTGGTGCACAACTCGTCAGCAGATGTAGTTGGCCGAAGAATGT GCTTCACCTGCGTCTTCTCTTTACTAACATACCCAATTGCAGTATCAGGAAGACAGAGTGGGCTGCTGCACCAGAGGCTT CAAGAAAATCGTCTTTCCTCACAAATTTGAGCACAACATTTTCATTCACACAGCAGAGCGCCACCTCCGGTCCACCTAAG CAGGCACCAGCCATGCTTAACTCCGGAATTTATCCAGACGGCCCGCCGGTGCCGGTTCGCGCCGGTAAACTACTTAAGTA TGTGGAGGCAGCCGAGGTCGTGCGAGGTCCGCACGATACTCCTGGGCATTGGTTGGTAACAGCTGCTAAGCTTGTGACTG AGGGTGGTAAGATTGGGTTGCAGGTGAAATTTGCATTGTTAGATTACTGGTGATTGATCCAGCCTTCTACTCTATCTCTA GCCATAGTAAAGTAATATCATTGATTGTCATGCCTTGTTGCTTGAGTTTTTCTGAATATGCAGATTGCTTGTATATATTT TTCCTAAAGGCTTTGTACAGGAGAGTATACAAATTACAAAATGAGTGGTTGTTAACATCAGGCAATAGAAAGTGAAAATT TGACTATTCTGCTTATTCTGTATGCATTTTAGTTAGTTCATTAGCAATCATTTTAAGGGAAATGAAGAGGGTGTAGATGA TACAGTGGAAAAATTCTGAAGGAATTGGTGAGCAAAGTAATTACATGCTTGCCTGAAATATAACCTTGACTCGAGGCTCT TACTTATATATAGCTTTCTACTTTGTTGTTGGTCTATGAGTAAGGTAGGGAAACAACTATGTGCTAGGTCCAAGGATGGG TTAGTGTTCTATCCTCAGAACATAGAAACAGGGTATAGTACCTAACGTGAGAGGGTTGTGATGTGAGGATCTTAGAGAGA AAAAGTGTAACCGCTTTTAGAGAGAATATAACTGAATTTCAAGCTTGTTATTTCACAAATGAGCTAAGAGTCTTTTACAA TTGGTAACCGCCCCCTATTTATAGGCTCGGGGTTGGGCCTTGTGCTCCTAACCGCCCATGGTGGGCCAGTTGGGTCCCCC GGGGGAGGCCCAAATTCCCTAACTCACTCACCGCCCTGAGGCAAGCGCCCCTGGGCAAGGGCCCCTGGGTCTCGCCCAGT TCAGTTAGACTCACTTTATGGATCTTTATGGATCTAATGTATAAACATTTCCTTATATTTTTGTGAGAGGCTGATTGCAT GACTCGAATCTATGATCTGAAAGTCAAATTATAACAATTTTACTGTTGCATCAAGGCTCGCCCTATGTCTATGAGTAACT TAAAAAAAAGAAAAAAAATTGAAACTCAGAAAGCATGAAGAAATAAAGTATACGATGACTATTATTAATGATCCTACATT GCTACCTACTCAATGATGTATAGTTGTACTTGGCTTCACGTGCCTATAATTGACCATTGTAAACTTGGATAAAATTGTTT GGTGTTGTGTAAGGTTCGGACTTAGATAGATGCCTAAGAACTACTCTATTATTCCCGATATTCATAAGTAGCCATCTGTG GTTCCTGCATGGTTTGTTTCCTATTGTTGAGTGAGATCAATTATTACATTACCTTGTGCAACTTTACTTGGAAAAAAAGG AAGCTTTCCTTTTTCCCTTTTTGGGTCCA
CDS sequence (LotjaGi4g1v0367900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGTGGAGGAAGAGGGTATTGAGATGGTGGCATTGGAGTCTCTGGGTAAAGGGTTTGATTTGGCCAGTGATTTTCG GTTGAGGTTTGCAAAGGGAATTCGTGAAGGGAGGGGTAGTAGTAGTAGTAGGAAGAGGTTGGTGGTGCTTGATGAACAGA ACAAGAGGGATATTTTGATTCCTGGAGCTGGTGGAGTTACAATCAAAGGTGTTTCTGAGAATATTCGTTGTGATAAAGGT GATCTTCTTCGCTTCAAGTCTGATGTGCTTGAATTCAACCAGATGTCTGAGTTGCTTAATCAGAAATCAGCAGTGCAAGG GAAAATCCCTTCTGGCTATTTCAATGCTCTGTTTGATTTAAGTGGTGATTGGTTTCGTGATGCTGCTGATACCAAATATC TGGCTTTCGATGGGTATTTCATTTCACTTTACTATCTGCACCTGACAGCTTCTCCAATAGTCCTACAAGAAGAAGTAAAG AAGTCTGTTCCAGCTCAGTGGGATCCTGCTGCATTGTCTAGGTTCATCCAGACATATGGTACACACTTAATAGTAGGCAT GGCTGTTGGAGGTCAAGATGTAATCTGTGTCAAACAAAAACATTCTTCAAAGATTCCTCCTGGTGATCTCAGAAGGCATT TAGAGGATCTTGGAGATTTTTTATTTTCAGATGTAAGGAGCCCTCCTTTACTACAGAGGAAAGCGGCAGATGGCAAACAG AAGGTTCCTGAGGTCTTTAATCGTGTCATGCAATCAAACACTATGTCATTCACCAGCATTTCGGAAACATCGAGCAAGGA TGGCCTCACTATCATTTGCTCTAAAAGAGGAGGAGATATGCTCAAGCACAGTCATTCGAGTTGGCTCCAGACTGTGCCAT CTAATCCTGAAGCAATCCTCTTCAAGTTTGTTCCTATTTCCTCACTTCTGGCTGGAATTCCTGGAAGTGGCTATCTTAGT CATGCCATCAATTTGTATTTACGGTATAAGCCTCCTGCTGAAGATTTACAATATTTTTTGGAGTTTCAAATTCCAAGGCA ATGGGCGCCCATGTTTTGCGAGCTGCCTCTCAGACATCATCAGCGGAGGAAGTCTTCTTCCCCTTCCCTGCAATTTAATT TCTTGGGTCCAAAGCTTCATGTCAGCTCTACACAGGTGTTAAGTGAACAAAAGCCTGTAGTTGGCCTCCGCCTGTACTTG GAGGGCAGGAAATGTGATAGACTTGCTTTACACATACATCATCTTTCAAGTCTCCCAAATAAGATGATCCTCTCTTCAGA GACATCGACTCCAAGCATGTGGCGAGGATCTGATGATAATGAATCCAGTAACCAATTCCTGGAACCAGTCAGATGGAAGC GATTCTCAAATGTGTGCACAGCTGTGGTCAAGCATGACCCTAACTGGCTGAACAGTTCAACAGGCGTTTATATAGTAACT GGTGCACAACTCGTCAGCAGATGTAGTTGGCCGAAGAATGTGCTTCACCTGCGTCTTCTCTTTACTAACATACCCAATTG CAGTATCAGGAAGACAGAGTGGGCTGCTGCACCAGAGGCTTCAAGAAAATCGTCTTTCCTCACAAATTTGAGCACAACAT TTTCATTCACACAGCAGAGCGCCACCTCCGGTCCACCTAAGCAGGCACCAGCCATGCTTAACTCCGGAATTTATCCAGAC GGCCCGCCGGTGCCGGTTCGCGCCGGTAAACTACTTAAGTATGTGGAGGCAGCCGAGGTCGTGCGAGGTCCGCACGATAC TCCTGGGCATTGGTTGGTAACAGCTGCTAAGCTTGTGACTGAGGGTGGTAAGATTGGGTTGCAGGTGAAATTTGCATTGT TAGATTACTGGTGA
Protein sequence (LotjaGi4g1v0367900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVEEEGIEMVALESLGKGFDLASDFRLRFAKGIREGRGSSSSRKRLVVLDEQNKRDILIPGAGGVTIKGVSENIRCDKG DLLRFKSDVLEFNQMSELLNQKSAVQGKIPSGYFNALFDLSGDWFRDAADTKYLAFDGYFISLYYLHLTASPIVLQEEVK KSVPAQWDPAALSRFIQTYGTHLIVGMAVGGQDVICVKQKHSSKIPPGDLRRHLEDLGDFLFSDVRSPPLLQRKAADGKQ KVPEVFNRVMQSNTMSFTSISETSSKDGLTIICSKRGGDMLKHSHSSWLQTVPSNPEAILFKFVPISSLLAGIPGSGYLS HAINLYLRYKPPAEDLQYFLEFQIPRQWAPMFCELPLRHHQRRKSSSPSLQFNFLGPKLHVSSTQVLSEQKPVVGLRLYL EGRKCDRLALHIHHLSSLPNKMILSSETSTPSMWRGSDDNESSNQFLEPVRWKRFSNVCTAVVKHDPNWLNSSTGVYIVT GAQLVSRCSWPKNVLHLRLLFTNIPNCSIRKTEWAAAPEASRKSSFLTNLSTTFSFTQQSATSGPPKQAPAMLNSGIYPD GPPVPVRAGKLLKYVEAAEVVRGPHDTPGHWLVTAAKLVTEGGKIGLQVKFALLDYW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 340 | 340 | 19.787 | ||
| PANTHER | 8 | 616 | 609 | 0.0 | – | |
| PANTHER | 8 | 616 | 609 | 0.0 | – | |
| Pfam | 114 | 326 | 213 | 1.6E-26 | ||
| SMART | 131 | 328 | 198 | 1.6E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0367900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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