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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0371200 |
| Transcript ID | LotjaGi4g1v0371200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein BUD31; TAIR: AT4G21110.1 G10 family protein; Swiss-Prot: sp|Q65WT0|BD31B_ORYSJ Protein BUD31 homolog 2; TrEMBL-Plants: tr|A0A1J7HIV8|A0A1J7HIV8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0371200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75067587..75070423) extracted from Lotus japonicus Gifu genome v1.2.
AATAAAAGCACTCTATTTTATTTTTGAAATCGAAGGACGACGCGGTGCTCCGAAAGTTCCAGAAAAACCCCCAAACTCTC CGTCCGCCCACAACACCGCCGTCTCGCCGCCGGTAGAGTGACCCGTGCCGCCTGAGGTTGGTTTTCTTTCCTGTTTCAAG CTTTTAGTTTTCTCATTCGATTTCCACTCCCTTTATCTTTGATTCCTTGTGTTTTGCCCCTAATGCTGTTTATTTATGGC TCTTAGGGTTTCTTCAAAATTAGTTTCATTTGTACTTTGATGTGAATGTTTAGTGGGGAAATGTTCAACCAACAATTCTG TTAATAATTTTGCATATAGTTCATGTTTAACTGTGATTGATTGAATTTGAAGCTCTCTATCCATTCATATGTGAAGATTA CACTGCTTCTCATTCCATGAAGTTTAGATTTTCTATACCTTTGTTTATTATGGACTAATTTCACACTTTGTAGTGCCATT TATACTTGTAGTTAGAATGTATCGAAATTGACACTTCAATGTTGCATTTTCCTTTGACAGCTGCAAAAATGCCTAAAGTG AAGACGAACCGTGTTAAATACCCAGAGGGATGGGAATTAATCGAGCCCACGATCCGTGAACTTCAAGCAAAGATGAGGGA AGGTTGGGATATTATTCTTATGCGTGCCTTCATAGTTTTTTTTTTCTCTTTTCATTCTGTAATCTATTAAAATGATTTTT TTTTCTGTATCTTTTATGTGGCAGCTGAGAATGATCCACATGATGGCAAAAGAAAGTGTGAGACTTTGTGGCCTATATTT AAAATTGCACACCAGAAGAGCCGATACATATTTGACCTCTACCATCGGAGGAAGGAGATTTCTAAGGAGTTATATGAATT CTGTTTAGATCAAGGATACGCTGACCGCAACCTGATTGCAAAGTGGAAGAAGGTACTTATGATGAGTTATTTATTCTATT TTCTAAAGTGTTGTTGTTTTGCTATTTATTTTTTTCTTTGGAGAATTAGTACAAAGTGGAAATATGGAAACATTTGTGTT AATTATGTCCCGAGTTTTCTAAACTCCGTTGAGTAGCAGCTTTGGTATTAGGATAGCCTTTAATTCTTGGTCACCTTATT CCCATTAGGATACGGATGTTAATTGATTGTCTTTTCTTAGATAATATATGCTGTAGCACCAGGCATGCCTTTTAGTGAAA CTTGTTTTATGCTTGCTTCATTTACGCTCCTTGAATTTTTTTTCAACTATGCTGCCATGTTATTATTTTGGTGTCTGGAA AGTTAGTTTTTTTGCTTGTATTTTGGATTTAGTGCCTTTCGAGTCCATGGAAATTGGTAGAAGTATTGATATAAAGGGAT TGTTGTCGAGATTTGATGTGGGTTGTGAATGTGCGGTTTGCCTGTCATCATCATTGCTGCCTAAACATTTTTTTAAGTGG ACTTTCCTTGCAAATAATATCAATAGGCCAAGGTTCAATAACATTTGTATTCAGGTAAATAAGCTGTGAATTGCATGTGT AGTGTCCTGTTTTATATATTGTAGTGGATATTGTCTCCTACTTTGATTTAACTAGTTAGGGAAGTGCTGTCTTCCTAAAT GGAGCTGTGTCTGGATTCTAGAAAAGATATAAGTGAGGATTAGCAATCTTGTTTTGAATTGCTAAAATATTAGACATTCA TGTGCTACTTTGATTTAACAATATGTATATACAAAATTTGTGAACTATCGCCCCTGTGCTAAGGAGTAAGGCCATTGTTT TGCTGCCACATAATGATTAACTCCACATCCATCAATGTGATTAGCTATAAACATGTCCTGAATCCTGATTGTAACTTAAT TCAATTGGAGAGTCATATTTGTCTGTTTGATACTGAGGACTTGAGGTGAAACACAGAAAATATTGACACTTCAGACATTT TTGCTTTTCCCAAGTTCACAAATATTCATTGCTATTAGCAAACATTGTTAAAAATATTCTAAGAAAAATCATTATTGTTT GCCGCCTTCTGCTTGACTTCAGTTAATCCAATTACAGAGTTGTTTTTGAATAATTACTGTTATTAATGCTACTACTAGCT ATCCAAAAAAAAAAAAACTAATGCTACTTCTACTAGTATTACTATTATTAATTCAATTACGTGAAAATTTACTTCTACGA TCTGTAAAATAATGTTTAAAGTGATTTGTCTCATCTGTGCATTGTATGTGCTTTCTTGGATTTGAGTACTTAAATCTTTA TGTTTTGTTTATGAATTGCAGCCTGGTTATGAACGTCTGTGCTGCTTGAGGTGCATGCAACCGCGCGATCACAATTTTGC CACCACATGTGTTTGTAGAGTACCCAAGCAACTTAGGGAGGAGAAGGTAATAGAGTGTGTCCATTGTGGTTGCAAGGGCT GTGCAAGTGGGGACTGATGGGACATCAATTTTGCAGCATTAAATGCCCAGGGAGGTTTTGTAAGAATGATGTGTTTGTGC TTTTATCTTTCTGTTGTCTGAGACTATCAGGGGGCTCAGCTTATGCTTGTATTACTGTTTACTAACTTTAAGGTAGCTAT ACATTTGGAACATTTAACTAATTACCAGCATTAATCATCTGCTTATTTCATAACCTGATCGAGGTTTGTACCTTCACATT GATGAGCGTTTACTTTTGAATTTGATCGATACTTGGCTTAGAATAATTGAACAGGGTTCCGTTTAAACAACTCTATTAGG TGTTTTCATGCTCTCAATTGGGGGGTGTTGTTGGGCTGGGTTGGTTTAGATTTGGGATGTATAGATGTCCAAAACAACCT GATGTTGAATGAGTTGGTTCGGTCAGGTTGGGTACTG
CDS sequence (LotjaGi4g1v0371200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTAAAGTGAAGACGAACCGTGTTAAATACCCAGAGGGATGGGAATTAATCGAGCCCACGATCCGTGAACTTCAAGC AAAGATGAGGGAAGCTGAGAATGATCCACATGATGGCAAAAGAAAGTGTGAGACTTTGTGGCCTATATTTAAAATTGCAC ACCAGAAGAGCCGATACATATTTGACCTCTACCATCGGAGGAAGGAGATTTCTAAGGAGTTATATGAATTCTGTTTAGAT CAAGGATACGCTGACCGCAACCTGATTGCAAAGTGGAAGAAGCCTGGTTATGAACGTCTGTGCTGCTTGAGGTGCATGCA ACCGCGCGATCACAATTTTGCCACCACATGTGTTTGTAGAGTACCCAAGCAACTTAGGGAGGAGAAGGTAATAGAGTGTG TCCATTGTGGTTGCAAGGGCTGTGCAAGTGGGGACTGA
Protein sequence (LotjaGi4g1v0371200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPKVKTNRVKYPEGWELIEPTIRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFDLYHRRKEISKELYEFCLD QGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFATTCVCRVPKQLREEKVIECVHCGCKGCASGD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 145 | 145 | 1.1E-94 | – | |
| PANTHER | 1 | 145 | 145 | 1.1E-94 | ||
| Pfam | 1 | 143 | 143 | 3.5E-63 | ||
| PRINTS | 12 | 32 | 21 | 8.7E-58 | ||
| PRINTS | 47 | 70 | 24 | 8.7E-58 | ||
| PRINTS | 71 | 96 | 26 | 8.7E-58 | ||
| PRINTS | 97 | 122 | 26 | 8.7E-58 | ||
| ProSitePatterns | 100 | 122 | 23 | - | ||
| PRINTS | 133 | 142 | 10 | 8.7E-58 | ||
| ProSitePatterns | 133 | 142 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
Expression pattern of LotjaGi4g1v0371200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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