Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0377300 |
| Transcript ID | LotjaGi4g1v0377300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier family; TAIR: AT5G19760.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|Q9C5M0|DTC_ARATH Mitochondrial dicarboxylate/tricarboxylate transporter DTC; TrEMBL-Plants: tr|G7LIP6|G7LIP6_MEDTR Dicarboxylate carrier protein; Found in the gene: LotjaGi4g1v0377300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75630944..75636158) extracted from Lotus japonicus Gifu genome v1.2.
ATTGTTATTCCATTGTTTGTGGGGGGAGAAGAAGAGGAAGAGAGAAAGAGCATTGTGTTGTTGTTGTGTGTGCAAGCAAA GAGAGGTAGCTACAATAACACTCACTCACTATATATGCCTTGTAAATAGTGCTCTCTATCTGCCTCTTCCTCCATTCACC TCTCCAAACTTTCCTCCTTCTTTCATTCTCTCACCACACACACACACACCAACACCAACAGCAACAATGGGAGATGAGAA GAAGCCCAAGGTTGGTGTCTGGCCCACCATCAAGCCTTTCGTCAATGGCGGAGCCTCCGGCATGCTCGCCACCTGCGTCA TCCAACCCATCGATATGATCAAGGTTTGCGAATAAAGCTCTCACCTTTACGCAATTTCACTCTTGATTCGCCCAGATGGC CTTCTGGGTCTCTCTGATTTTCCTTCTCAGACTCAGATCTGTGTTTTTGCTGTGATGGGGTTTCATTGTTTTGATGATTT TTTGTTGGTGTAGGTGAGGATTCAATTGGGTCAAGGATCGGCTGTACAGGTTACATCCAACATGCTCAAGAATGATGGTG TTGGTGCCTTCTACAAGGTTGCTTTTGCATTTCTTCCCATGTTTTTGTTTTCTTTTTTTTGCATTTTGTGACTGATCCTT GATTGTTCTAGCTGGAATTTCAATTTTGTGGATGATTTATGATAATGATGATTCACCATGGTGTGCATGTTTGTGTTGTG TTTTCTTCATTTGCTTGCCTATAGATCTGCAAGTGGAACTGGATTTTCATACATTGTTTGTTGCTTTGGCTTATGAGTTT TGATGTGGTTTCTTTTTTTTTTTTTTGATAGGCAAATGTTAGTTGTTAATTGTTAGTAAATTAGTTCCTTTGCTAGGATT TGAACCCTGGCCCTTCACCCTGCAAATCCGTTCATTTCCCTTAGCTCACCAAGTGAGCTACCCTTCCCCCCCCCCCTCCC ATGATGTGGTTTCTTACCTATGAGTTACTGTTTTGTCCGGCTTTGAATTTGGACTTCGGTTTTGATTTTATTGTTGATCC TTTGTGGAGGTATTTGTATACTGGTGGTCTAAAGAGAATCACTTTATGCAGGGTTTGTCAGCTGGACTACTCAGGCAGGC TACATACACCACTGCTCGACTTGGAACATTTAGGTGAGTTGTTCTGATAACGTTCATGGGATCACTTTGTTTAATCTTAA TAAAATAGTGGTTTTCTGATGCAATTTCTTCGAGGCTATGTTTGGATTGACAGATCATAGGGAACGGAATGGAATGAAAT AGAGTGGAATAAAAGTCATATTCCATTGTCTGGATGTTTTAAGGTGGAACGGAACAAATTTATCACTCAATTGTCTGGAT AATGAACGGAACCAAATGAGTTATAACATTTTTATTTCTATATTACCCGGACTTTGAAAACAACAATATTGAATATATAA TAAAGGTAGATGTAGAAAAATATATTTGTAGTTTAAGTAGTTTCAAGTGGCTCCATTCCATTCCTCTCCGTTCGTGGGGG TAAGAAAATTGATGGTAAGTAATGGAATGAGATGGAGTGGATTACATCACCTTCCATTCCATCTTTATTTAGCAAAACCA AACAATGAAACATAAAACCATTGTACTCCCTACCATCAATCCAAACAGAGGCTTGATTTTTGTTCTCCATTAGCTATTAT TTTTGCTTCTGAGAAAAGCGTTAACCAGTTTTTGGGTGTTTTAATTGAAACTTACATAATTAATATTGATTTTTTTCGAA ACAAATTTTTCAAAAGAGGAGTTACTTAAAATGCAGTCTAACGGGCTGTTAATCAATCATAAAGGATAAGTTTTGTTGTT TTTCTATAAAGTCTTTGTATGATTCCTTTTCATTGTTTTGCCCTAGTAGTTTTTATCACTAGATGGTACATTCTCTTGAA TAGTTAAGGGTTTTGTCTTACATACTGACTTTAATACTTTTTAGAATCTTGACAAGCAAAGCAATTGAGGCTAATGATGG CAAGCCCCTGCCACTGTATCAGAAAGCCTTATGTGGGTTGACTGCTGGTGCTATTGGAGCAACTGTTGGTAGTCCAGCAG ATTTGGCACTCATTCGTATGCAGGCTGATGCGACTTTACCTCTTCATCAGCGCCGACATTACACAAATGCCTTCCATGCA CTTTATCGTATTGTTGCAGACGAAGGGGTTTTGTCGCTTTGGAAAGGTGCTGGGCCTACTGTAGTAAGAGCAATGGCATT GAACATGGGGATGCTTGCATCTTATGATCAAAGTGTTGAGTTCTTCAAGGATTCCGTTGGTCTCGGGGAAGCTTCTACAG TTGTAGGTGAGGAACCATTTAGATATTGTTGAACAATTTTATTTGAACTTTGCACTATCTTACATTAGAAAGATTCATGA ACTCGTTTTTCCTTCATCAACTACTATCATTTTATTTCCAAAATTTTCCGTCAGATACATAGTTTTCCCCTTTTCTATTT TTTGCTTGCTTGTATGGGTACTTATTGTTTGATGTGTGATAGCTCTCGTCTTTTACTCCCAAACCATATAATCACTTCAA ACAGTGCATTATATGGTCACTTGCAGCATTTCTTAATATTATTAGTAATGTAGTTTAAGTGATAAGCCTTTTGAAATTAT CAAGTATAAATACTTGTATTTTAAGGTTAATGACTGGTGTTTGTTTGGGCCAAATATTCAAGATGATGACCAATTACACA AATATCAAATTTTGGCCTAAATTTTTTGGGAGGTTGGGTAATGGTTGTATTTATGATGTGCTGAGGGCATTGTTTAACAT CTCATATTGAGGGGGCATTCGGGTAAACACCTTACTTCTTACTAAATACTTATCAAATTAATGTTTATTCATAGTCTTAT GCAAGAAGCTTATTGAAATAATCTCAAAGAGCTTATAAGTAGGTCATGAACTATTTTCGTAAGCTTAACCAAATTCCTAC TCATTAGCACTTTTTCATAAGCTAATATGGGAAGCTTATCAAAATGAGTTCAAAAGAGATTATAGGTAGTTCATAAACTA TTTTCATAAGCTTAACCAAATTCCTATTTAAGTGGGTATGCTATAAGATAAGCTTAAATAAGCTCTTCCAATACACCCTA GAGGCCTAGATGATTTTCTTTGAAATTTGATGAATAATTCCTATCTTCCATTCCTTGCCATGCGCTATATATAGATCACC ATGGGAGGAAAGCAGGACAGTTTAACCCTGTTTTTACTTTTTTCTTAGCTGCTTATTAAAGTATATGATTGTTTTTTCTG GTTGGCTCCCACGTCTAATTTTGACTGTGAAGAAGCTGGGAGAAAAAGTATATAACCAAGTTTCCAAACTCACCTCAAAT ACAAATTAATTATAAGATAGTATGTTACCATCTTGACGACTTAGCTTGGAATTGCTCCTTTTTCATGTGCAAATGGTTAT TTGAAGATCTACCTTTATAAAGGATGCTATTGTTGGGTATAGACTAACTGAGCGATGTTTATGCAATTAATTAATGTTTA TCCTCAATTAAACTATGTATATTCTGTTCTTTGTAACATTAAGTGTGGTTCTTTATCTGGCCAATGTCCATGATGCTGTG GTCCATGAATACTTGTGTGTACCCAAGCGACACTGCTTATTCAGATATTCAACTTTTGTTGTTCACTTTTGTCTCCATTG GTGCTCTTGCAATTTGTCTCTCTTTCTCTCCCTTTGTGTAATTTGATTTTCAAATATTTGTATTACAAGTTGTTGTTCTG GTACAAATTTTTGGGAGTCTAGATTTTTTGCAGTGTTCTGATAGTATGGAAGCTTATATAACATTACCCTCATATGTCAT GGTTCATAGTTTGAGTTACGGTCCTATAAGGGAATTCTCCTTTATTGAACTCGAGTCTTTGTTTAAGTGGTAACCTCCGA CATTCCATGTTGATTGTCTACTGTATGGTACATATCTGAAACTCCCTTTTTATACTGCCAAAGATTTTATTCTCACTGTT TGCTCTTATTATCTCTTCAGCTGCGAGTTCCGTTTCTGGATTTTTCGCGGCAGCTTGCAGTTTGCCATTTGACTACGTCA AGACCCAGATTCAGAAGATGCAACCTGATGCTGAGGGAAAATATCCATACACTGGCTCTCTTGACTGTGCTGCGAAAACC TTAAAACAAGGAGGACCGTTTAAATTTTACACCGGATTCCCTGTCTATTGTGTTAGGATTGCTCCTCATGTCATGGTATT CCCTTCTGTCAAACATGTCCTTTCTACAGTGATCATTTTACTTGTTACTTTGTGATGTTCTTTTTAGTAACTAAATTACA TTACATTTGAGGGTTTTATTAAGTTAATATTTTGTTAATATGCAGATGACATGGATCTTCCTCAACCAGATTCAGAAGTT GGAGAAGTCCTATGGGTTGTAGTTCTCTGCAGCGGTGGACATTTTTTGTTGAATTCAAGGTTTGAGCATTTGAATAATTT GTTGGCTGTGTTGTAGCCCGTTTATGCAAATTAAACACCAAAGGAGCTCTGATCATTTTTTAAGATTTAATTAATCATGC AACTGAAGCAGGAATTTGACACACTTTATATTGTATTAGTAAAATATAGAATTGGATGCGGATGAAGCAGAACAGCATAA TTCCATTTTTGAATGGATGCAATTGAGATACCTGTTGGGATATAATCCTAAACTAGAATAAGTACTCTATCTCTTAGACA ACATTTAGACATCAAGTTTTGTAACTTTCTTCCATATTATCTTCAAGTATTTCTTGCAGCTAAGGATTCAAGGCTTTTCA AGCACATCTTATTTGTTGATGCTTTTTCCATTTTTTCTTTAATAGAAATTGTTTGTCTACTCTTAATCGTTTTTGTAACT TTTTTCGTAACGGTTTTCCAAACACACCCAATGATAGCGTCAAATGTGGACATCTAATTTCTTAGTGTGTTTTGGATTTC TGTTGAACTCAATGGATCAATGTTGAACTTGATCCAGCAAAATTTTGCTTTTTCCTCATTAAACTTGGCGTGGTAGATAC AGAAGAAAAATCACGTAAGCGTATGCATGCCAAACTTAAAACATACACTAGGTAGATTCAGAATGCAGAATGCAGCGGTC AAAATGGGACATTACTTTTGACACCACTCCTTTTCCTTCTCGCACCTCCATCTATTATTGAAGTTAATTTCTTGCAAAGT AAAAAACTTACCGAA
CDS sequence (LotjaGi4g1v0377300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGATGAGAAGAAGCCCAAGGTTGGTGTCTGGCCCACCATCAAGCCTTTCGTCAATGGCGGAGCCTCCGGCATGCT CGCCACCTGCGTCATCCAACCCATCGATATGATCAAGGTGAGGATTCAATTGGGTCAAGGATCGGCTGTACAGGTTACAT CCAACATGCTCAAGAATGATGGTGTTGGTGCCTTCTACAAGGGTTTGTCAGCTGGACTACTCAGGCAGGCTACATACACC ACTGCTCGACTTGGAACATTTAGAATCTTGACAAGCAAAGCAATTGAGGCTAATGATGGCAAGCCCCTGCCACTGTATCA GAAAGCCTTATGTGGGTTGACTGCTGGTGCTATTGGAGCAACTGTTGGTAGTCCAGCAGATTTGGCACTCATTCGTATGC AGGCTGATGCGACTTTACCTCTTCATCAGCGCCGACATTACACAAATGCCTTCCATGCACTTTATCGTATTGTTGCAGAC GAAGGGGTTTTGTCGCTTTGGAAAGGTGCTGGGCCTACTGTAGTAAGAGCAATGGCATTGAACATGGGGATGCTTGCATC TTATGATCAAAGTGTTGAGTTCTTCAAGGATTCCGTTGGTCTCGGGGAAGCTTCTACAGTTGTAGCTGCGAGTTCCGTTT CTGGATTTTTCGCGGCAGCTTGCAGTTTGCCATTTGACTACGTCAAGACCCAGATTCAGAAGATGCAACCTGATGCTGAG GGAAAATATCCATACACTGGCTCTCTTGACTGTGCTGCGAAAACCTTAAAACAAGGAGGACCGTTTAAATTTTACACCGG ATTCCCTGTCTATTGTGTTAGGATTGCTCCTCATGTCATGATGACATGGATCTTCCTCAACCAGATTCAGAAGTTGGAGA AGTCCTATGGGTTGTAG
Protein sequence (LotjaGi4g1v0377300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDEKKPKVGVWPTIKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAVQVTSNMLKNDGVGAFYKGLSAGLLRQATYT TARLGTFRILTSKAIEANDGKPLPLYQKALCGLTAGAIGATVGSPADLALIRMQADATLPLHQRRHYTNAFHALYRIVAD EGVLSLWKGAGPTVVRAMALNMGMLASYDQSVEFFKDSVGLGEASTVVAASSVSGFFAAACSLPFDYVKTQIQKMQPDAE GKYPYTGSLDCAAKTLKQGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQKLEKSYGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 298 | 292 | 1.2E-191 | – | |
| PANTHER | 7 | 298 | 292 | 1.2E-191 | – | |
| ProSiteProfiles | 12 | 93 | 82 | 18.501 | ||
| SUPERFAMILY | 12 | 286 | 275 | 9.94E-68 | ||
| Pfam | 14 | 89 | 76 | 3.0E-14 | ||
| Gene3D | 15 | 296 | 282 | 4.4E-69 | ||
| Pfam | 102 | 197 | 96 | 2.4E-19 | ||
| ProSiteProfiles | 103 | 194 | 92 | 23.114 | ||
| ProSiteProfiles | 202 | 292 | 91 | 17.686 | ||
| Pfam | 208 | 292 | 85 | 2.0E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0377300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…